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The map label for this gene is yfdC [H]

Identifier: 157371629

GI number: 157371629

Start: 3751669

End: 3752598

Strand: Direct

Name: yfdC [H]

Synonym: Spro_3392

Alternate gene names: 157371629

Gene position: 3751669-3752598 (Clockwise)

Preceding gene: 157371618

Following gene: 157371630

Centisome position: 68.85

GC content: 55.16

Gene sequence:

>930_bases
ATGAGCGACTCACAACAGCGCCCGAAGACGAACAGCGACGATCCTCTGCAGGTGGAGAGCAAAGAGCATGAACAGGGCAA
GAGCGAAATCGAGGTAAAGGAACAGAACCTGCCCTCACGCGCGGCGGCGGTGCATGAGCAGATCCGCATGGAGGGTGAGA
AAGAACTGGAGCGTGACTGGCTGGCCTTGCTGTGGTCAGCGGTGGCCGCCGGGCTGTCGATGGGGGCCTCCCTGATGACC
AAGGGTATTTTTCACGCCCGTTTGCCGGACGACCCCAGCCGCTTCTTTATTGAGAATATTGGCTACACCTTTGGCTTTAT
CATCGTGATTATGGCCCGCCAGCAGCTGTTTACCGAAAACACCGTGACCGCCGTACTGCCGATCATGCACAAACCGACGC
CGAGAAATTTCGTCATCCTGTTTCGCCTGTGGGGCGTGGTGCTGCTCGGCAACCTGATTGGCACCGGGCTGGTGTCACTG
GCGTTTATTCACATGCCGATTTTTGATGAAAACACTCGCAGCGCCTTCGTTAGCCTGTCGGAAGAAGTGATGCAAAATTC
ACCGTCAGAAATGTTCGCCAACGGTATTTTGGCCGGCTGGATCATCGCCACCATGGTGTGGATGTTCCCTTCCGCCGGGG
CCGCCAAGATTTGGGTAATCGTCCTGATGACCTATCTGGTGGCGATCTGCGATCTGACCCATATCGTGGTCGGATCGGTA
GAGATCCTTTATCTGGTGTTTAGCGGTGTCATCCCCTGGCAAGATTTTATCTACCCATTCGCCATTCCGACGCTGGCCGG
CAACATTATCGGCGGCACCTTTATCTTTGCGTTAATCAGCCATGCACAGATCCGCAATGATATGAGCGATAAAAACAAAG
CGGCGCGGCTGGAGGCAGAAAAACAGACTGCCAGGGCGAGAAAACCGTGA

Upstream 100 bases:

>100_bases
GTTACTTTTTTCTGCAATTTGCGACCTGGCTTTCGGCCTATCGATGGGCCAGCTATGCTTAATCCGTGACCCCGGCAGCA
GTTTAAGGAGAGAGCAGATA

Downstream 100 bases:

>100_bases
TCGCGGTCAGTGCAGCACGCGAAAATCAGTGCATATTGGCGATGGAATGAGCAAACGCACCGCTAAGCGCTTATTCTGCG
GGTAAAAAAAGGTATACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSDSQQRPKTNSDDPLQVESKEHEQGKSEIEVKEQNLPSRAAAVHEQIRMEGEKELERDWLALLWSAVAAGLSMGASLMT
KGIFHARLPDDPSRFFIENIGYTFGFIIVIMARQQLFTENTVTAVLPIMHKPTPRNFVILFRLWGVVLLGNLIGTGLVSL
AFIHMPIFDENTRSAFVSLSEEVMQNSPSEMFANGILAGWIIATMVWMFPSAGAAKIWVIVLMTYLVAICDLTHIVVGSV
EILYLVFSGVIPWQDFIYPFAIPTLAGNIIGGTFIFALISHAQIRNDMSDKNKAARLEAEKQTARARKP

Sequences:

>Translated_309_residues
MSDSQQRPKTNSDDPLQVESKEHEQGKSEIEVKEQNLPSRAAAVHEQIRMEGEKELERDWLALLWSAVAAGLSMGASLMT
KGIFHARLPDDPSRFFIENIGYTFGFIIVIMARQQLFTENTVTAVLPIMHKPTPRNFVILFRLWGVVLLGNLIGTGLVSL
AFIHMPIFDENTRSAFVSLSEEVMQNSPSEMFANGILAGWIIATMVWMFPSAGAAKIWVIVLMTYLVAICDLTHIVVGSV
EILYLVFSGVIPWQDFIYPFAIPTLAGNIIGGTFIFALISHAQIRNDMSDKNKAARLEAEKQTARARKP
>Mature_308_residues
SDSQQRPKTNSDDPLQVESKEHEQGKSEIEVKEQNLPSRAAAVHEQIRMEGEKELERDWLALLWSAVAAGLSMGASLMTK
GIFHARLPDDPSRFFIENIGYTFGFIIVIMARQQLFTENTVTAVLPIMHKPTPRNFVILFRLWGVVLLGNLIGTGLVSLA
FIHMPIFDENTRSAFVSLSEEVMQNSPSEMFANGILAGWIIATMVWMFPSAGAAKIWVIVLMTYLVAICDLTHIVVGSVE
ILYLVFSGVIPWQDFIYPFAIPTLAGNIIGGTFIFALISHAQIRNDMSDKNKAARLEAEKQTARARKP

Specific function: Unknown

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788689, Length=278, Percent_Identity=70.863309352518, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 34451; Mature: 34319

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSQQRPKTNSDDPLQVESKEHEQGKSEIEVKEQNLPSRAAAVHEQIRMEGEKELERDW
CCCCCCCCCCCCCCCCEECCCHHHCCCHHEEEHHCCCCHHHHHHHHHHHHCCHHHHHHHH
LALLWSAVAAGLSMGASLMTKGIFHARLPDDPSRFFIENIGYTFGFIIVIMARQQLFTEN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVTAVLPIMHKPTPRNFVILFRLWGVVLLGNLIGTGLVSLAFIHMPIFDENTRSAFVSLS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EEVMQNSPSEMFANGILAGWIIATMVWMFPSAGAAKIWVIVLMTYLVAICDLTHIVVGSV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EILYLVFSGVIPWQDFIYPFAIPTLAGNIIGGTFIFALISHAQIRNDMSDKNKAARLEAE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTARARKP
HHHHCCCCC
>Mature Secondary Structure 
SDSQQRPKTNSDDPLQVESKEHEQGKSEIEVKEQNLPSRAAAVHEQIRMEGEKELERDW
CCCCCCCCCCCCCCCEECCCHHHCCCHHEEEHHCCCCHHHHHHHHHHHHCCHHHHHHHH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HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]