| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is lysN [H]
Identifier: 157371584
GI number: 157371584
Start: 3703202
End: 3704704
Strand: Direct
Name: lysN [H]
Synonym: Spro_3347
Alternate gene names: 157371584
Gene position: 3703202-3704704 (Clockwise)
Preceding gene: 157371581
Following gene: 157371589
Centisome position: 67.96
GC content: 59.21
Gene sequence:
>1503_bases ATGGGGTATAGTAAAAAGTGCCACCAACTACCGAGCCAATTTTGCATGCATATTCCGTTAGACCGTCAGCAGGATGTTCC GCTGTATCTGCAAATTGAGGAGGCGTTGCGGCGGGCAATCCTGAGCGGCGTATTTGTTGATGGTGACAAACTGCCCTCCA CGCGCCAGCTTGCCGGCGAATTGGCCGTCAGCCGGTTGACGGTGGACAACGCCTATGCCGAATTGGCAGCCAAAGGCTTT TTACGCCAGCGACGCGGCAGCGGTGCCTATGTCCAGCACCCGCTGGCACAGCCCGCACAGCCACAACCGGCAACCGATGT CCCTTTCCCGGCGGAGCGTTTTACCACCCTGACCTCACGGCTGGATGGTTACCCCGATATCCCGCTGCCGGACAGCATCA TCAACTTTGCTGCCGGTGTCGGCAGTCCGAAAGTTTTCCCACAGGAAGAGTTCCGCAAGATCTTGCTGTCGGTGCTCAGC CGCCATGCGGAAGAGGCTTTCAGCTATGGCGAATACTGTGGCTACTACCCGCTGCGCGATACGCTGGGGCGGATCCTCAC CGCGCAGGGCATTCCGACCCATGCGGAACAATTGCTGATCACCAACGGTTCACAACACGCCATCAGCCTGATTGTGCAAA GCCTACTGGAGCCGGGCGATACGGTGATCGTCGAACAGCCGACCTACGCCGAAGCCCTGGGGCTACTGCGCCTGCACCGC ATCAATATTGTCACCATTCCCAGCGATCGGCACGGCATGCTGGTTGACCAACTGCCAGCCCTGCTGGAAAAACACCGGCC GAAGCTGATTTACACCATCCCCAATTTCCATAACCCTACCGGGCGCTGCATGAGTGAAGCCCGGCGGCGTCGCCTGTTGG CACTGGCTCAGCATGCCGGGGTGGTGATCCTCGAGGACGATTTTGTCGGCGATTTGCGCTACAACGGCAAGCAATTGCCC TCGCTGCGGGCGCTTGCGCAGCCGGGGGCGGTGATTTATGTCAGCACATTTTCCAAAATGCTGTTGCCCAGCATGCGCAT CGGCTATCTGGTGGCGGACAGCGAACACTATCAATGCATCGCCCGATTGAAACACGTCGACAGTTTTACCAGTTCCAATC TGATCCAGCGCGCGCTGGACGCCTTCGTCACCATCGGGCGCTACGACAAGCAACTGCGGCGTGCCGGACGAGTCTATCGC CAGCACCGGGATGTGATGGTCGCTGCATTACAGCAGCAACTGCCGCCAGGCTGCCGGTTTGAAACGCCGGAGGGCGGACT GTTTATCTGGCTGACGCTGCCCGCCGCCGTTAGCACCGAAGCACTGATGCCGGTGGCCTGGCGAGAAGGCGTAACTTTTG CGCGCGGAGAGTGTTTTTATGCCGAGGAACAGCGTGGCGCGCACGGCCTGCGATTGAATTTCGCCGCCAACACGCCGCCG CTGATTGAAGAAGGTATCGCCCGGCTGTGCCGGGCGATTAGTCAGGTGATAGATTCAGAATAA
Upstream 100 bases:
>100_bases AGACTCAGGCAGAGATTCTAACGCCGCGCGATTTTGCCGCCAGAGCCACTTTCCCCCGATGTTATACAGGCCACTTTTAT CCGCTTGAAGGCCTGCTGCT
Downstream 100 bases:
>100_bases ACCGGTGATTACAGCCCGGCCCACCACAGCCGCAGCTTCATGCCCCAATAGCTGGTCCAGCCGGTGGTGCTCTGCACCAC CTGGCCTTTGGAGATAATCA
Product: transcriptional regulator
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MGYSKKCHQLPSQFCMHIPLDRQQDVPLYLQIEEALRRAILSGVFVDGDKLPSTRQLAGELAVSRLTVDNAYAELAAKGF LRQRRGSGAYVQHPLAQPAQPQPATDVPFPAERFTTLTSRLDGYPDIPLPDSIINFAAGVGSPKVFPQEEFRKILLSVLS RHAEEAFSYGEYCGYYPLRDTLGRILTAQGIPTHAEQLLITNGSQHAISLIVQSLLEPGDTVIVEQPTYAEALGLLRLHR INIVTIPSDRHGMLVDQLPALLEKHRPKLIYTIPNFHNPTGRCMSEARRRRLLALAQHAGVVILEDDFVGDLRYNGKQLP SLRALAQPGAVIYVSTFSKMLLPSMRIGYLVADSEHYQCIARLKHVDSFTSSNLIQRALDAFVTIGRYDKQLRRAGRVYR QHRDVMVAALQQQLPPGCRFETPEGGLFIWLTLPAAVSTEALMPVAWREGVTFARGECFYAEEQRGAHGLRLNFAANTPP LIEEGIARLCRAISQVIDSE
Sequences:
>Translated_500_residues MGYSKKCHQLPSQFCMHIPLDRQQDVPLYLQIEEALRRAILSGVFVDGDKLPSTRQLAGELAVSRLTVDNAYAELAAKGF LRQRRGSGAYVQHPLAQPAQPQPATDVPFPAERFTTLTSRLDGYPDIPLPDSIINFAAGVGSPKVFPQEEFRKILLSVLS RHAEEAFSYGEYCGYYPLRDTLGRILTAQGIPTHAEQLLITNGSQHAISLIVQSLLEPGDTVIVEQPTYAEALGLLRLHR INIVTIPSDRHGMLVDQLPALLEKHRPKLIYTIPNFHNPTGRCMSEARRRRLLALAQHAGVVILEDDFVGDLRYNGKQLP SLRALAQPGAVIYVSTFSKMLLPSMRIGYLVADSEHYQCIARLKHVDSFTSSNLIQRALDAFVTIGRYDKQLRRAGRVYR QHRDVMVAALQQQLPPGCRFETPEGGLFIWLTLPAAVSTEALMPVAWREGVTFARGECFYAEEQRGAHGLRLNFAANTPP LIEEGIARLCRAISQVIDSE >Mature_499_residues GYSKKCHQLPSQFCMHIPLDRQQDVPLYLQIEEALRRAILSGVFVDGDKLPSTRQLAGELAVSRLTVDNAYAELAAKGFL RQRRGSGAYVQHPLAQPAQPQPATDVPFPAERFTTLTSRLDGYPDIPLPDSIINFAAGVGSPKVFPQEEFRKILLSVLSR HAEEAFSYGEYCGYYPLRDTLGRILTAQGIPTHAEQLLITNGSQHAISLIVQSLLEPGDTVIVEQPTYAEALGLLRLHRI NIVTIPSDRHGMLVDQLPALLEKHRPKLIYTIPNFHNPTGRCMSEARRRRLLALAQHAGVVILEDDFVGDLRYNGKQLPS LRALAQPGAVIYVSTFSKMLLPSMRIGYLVADSEHYQCIARLKHVDSFTSSNLIQRALDAFVTIGRYDKQLRRAGRVYRQ HRDVMVAALQQQLPPGCRFETPEGGLFIWLTLPAAVSTEALMPVAWREGVTFARGECFYAEEQRGAHGLRLNFAANTPPL IEEGIARLCRAISQVIDSE
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=397, Percent_Identity=24.6851385390428, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI33469970, Length=397, Percent_Identity=24.6851385390428, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4507369, Length=257, Percent_Identity=23.3463035019455, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1787710, Length=472, Percent_Identity=29.2372881355932, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1790797, Length=476, Percent_Identity=27.7310924369748, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1788722, Length=241, Percent_Identity=23.2365145228216, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321236, Length=280, Percent_Identity=24.6428571428571, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6321000, Length=251, Percent_Identity=27.8884462151394, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321929, Length=305, Percent_Identity=20.983606557377, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI21356535, Length=399, Percent_Identity=25.8145363408521, Blast_Score=119, Evalue=4e-27,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 55706; Mature: 55575
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSKKCHQLPSQFCMHIPLDRQQDVPLYLQIEEALRRAILSGVFVDGDKLPSTRQLAGE CCCCCHHHHCHHHHHEECCCCCCCCCCEEEEHHHHHHHHHHHCEEECCCCCCHHHHHHHH LAVSRLTVDNAYAELAAKGFLRQRRGSGAYVQHPLAQPAQPQPATDVPFPAERFTTLTSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH LDGYPDIPLPDSIINFAAGVGSPKVFPQEEFRKILLSVLSRHAEEAFSYGEYCGYYPLRD CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLGRILTAQGIPTHAEQLLITNGSQHAISLIVQSLLEPGDTVIVEQPTYAEALGLLRLHR HHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEE INIVTIPSDRHGMLVDQLPALLEKHRPKLIYTIPNFHNPTGRCMSEARRRRLLALAQHAG EEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC VVILEDDFVGDLRYNGKQLPSLRALAQPGAVIYVSTFSKMLLPSMRIGYLVADSEHYQCI EEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHCCCCCEEEEEECCHHHHHH ARLKHVDSFTSSNLIQRALDAFVTIGRYDKQLRRAGRVYRQHRDVMVAALQQQLPPGCRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ETPEGGLFIWLTLPAAVSTEALMPVAWREGVTFARGECFYAEEQRGAHGLRLNFAANTPP CCCCCCEEEEEECCCHHCHHHHCCHHHHCCCCEECCCEEEEHHCCCCCCEEEEECCCCCH LIEEGIARLCRAISQVIDSE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GYSKKCHQLPSQFCMHIPLDRQQDVPLYLQIEEALRRAILSGVFVDGDKLPSTRQLAGE CCCCHHHHCHHHHHEECCCCCCCCCCEEEEHHHHHHHHHHHCEEECCCCCCHHHHHHHH LAVSRLTVDNAYAELAAKGFLRQRRGSGAYVQHPLAQPAQPQPATDVPFPAERFTTLTSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH LDGYPDIPLPDSIINFAAGVGSPKVFPQEEFRKILLSVLSRHAEEAFSYGEYCGYYPLRD CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLGRILTAQGIPTHAEQLLITNGSQHAISLIVQSLLEPGDTVIVEQPTYAEALGLLRLHR HHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHEEE INIVTIPSDRHGMLVDQLPALLEKHRPKLIYTIPNFHNPTGRCMSEARRRRLLALAQHAG EEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC VVILEDDFVGDLRYNGKQLPSLRALAQPGAVIYVSTFSKMLLPSMRIGYLVADSEHYQCI EEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHCCCCCEEEEEECCHHHHHH ARLKHVDSFTSSNLIQRALDAFVTIGRYDKQLRRAGRVYRQHRDVMVAALQQQLPPGCRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ETPEGGLFIWLTLPAAVSTEALMPVAWREGVTFARGECFYAEEQRGAHGLRLNFAANTPP CCCCCCEEEEEECCCHHCHHHHCCHHHHCCCCEECCCEEEEHHCCCCCCEEEEECCCCCH LIEEGIARLCRAISQVIDSE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA