| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yeiP [C]
Identifier: 157371474
GI number: 157371474
Start: 3570225
End: 3570797
Strand: Direct
Name: yeiP [C]
Synonym: Spro_3237
Alternate gene names: 157371474
Gene position: 3570225-3570797 (Clockwise)
Preceding gene: 157371473
Following gene: 157371476
Centisome position: 65.52
GC content: 54.28
Gene sequence:
>573_bases ATGGCAAAGGCTAACGAAATTAAGCGTGGCATGGCGATCAGCTACAACGGCAAACTGCTGCTGGTGAGAGACATTGATGT ACAAAGCCCAAGCGCACGCGGTGCCAGCACCCTATACAAAATGCGTTTCTCTGACGTCCGCACCGGGCTGAAGGTAGAAG AGCGTTTCAAGGGCGATGATATTCTGGACACCATTAGCCTGTCCCGCCGTAAGGTGAATTTCTCTTACATCGACGGCGAA GAATACGTGTTTATGGATGACGAGGATTACACCCCTTACATCTTCAAGAAAGACCAGATCGAAGACGAACTGCTGTTCAT TCCTGAAGCCGGTCTGCCAGGCATGCAGGTGCTGACGCTGGAAGGCCAGGTGCTGGCGCTGGAATTGCCACAAACCGTGG ATATGGAAATTGTCGATACTGCGCCGGGTATCAAAGGTGCCTCCGCCAGTGCCCGCAACAAGCCGGCTACCATGGCGACC GGCCTGACCATTCAGGTGCCGGAATACCTCAGCGCCGGTGACAAAATCCGCATTCATATTGCCGAACGCCGCTATATGAG CCGCGCCGACTAG
Upstream 100 bases:
>100_bases TTTTTCCGCCACTGTTTTTGCTTGATCTGCTTGCCTGAAATCATCGGCGCGAGTAACTTGTCGCAACTTCCCAAAAACTC TTTATTGCAGGTTATTTTAT
Downstream 100 bases:
>100_bases TTGAAATTATGGCCCTTCAGACTGCTGACAAAGCCCGTTATTAGGGAGAGCGTGCCGAAGGGGTCGTAGCGGCTTGCCCG CCGGAGCGCCCCTCGGTGCG
Product: elongation factor P-like protein YeiP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAKANEIKRGMAISYNGKLLLVRDIDVQSPSARGASTLYKMRFSDVRTGLKVEERFKGDDILDTISLSRRKVNFSYIDGE EYVFMDDEDYTPYIFKKDQIEDELLFIPEAGLPGMQVLTLEGQVLALELPQTVDMEIVDTAPGIKGASASARNKPATMAT GLTIQVPEYLSAGDKIRIHIAERRYMSRAD
Sequences:
>Translated_190_residues MAKANEIKRGMAISYNGKLLLVRDIDVQSPSARGASTLYKMRFSDVRTGLKVEERFKGDDILDTISLSRRKVNFSYIDGE EYVFMDDEDYTPYIFKKDQIEDELLFIPEAGLPGMQVLTLEGQVLALELPQTVDMEIVDTAPGIKGASASARNKPATMAT GLTIQVPEYLSAGDKIRIHIAERRYMSRAD >Mature_189_residues AKANEIKRGMAISYNGKLLLVRDIDVQSPSARGASTLYKMRFSDVRTGLKVEERFKGDDILDTISLSRRKVNFSYIDGEE YVFMDDEDYTPYIFKKDQIEDELLFIPEAGLPGMQVLTLEGQVLALELPQTVDMEIVDTAPGIKGASASARNKPATMATG LTIQVPEYLSAGDKIRIHIAERRYMSRAD
Specific function: Unknown
COG id: COG0231
COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the elongation factor P family
Homologues:
Organism=Escherichia coli, GI87082061, Length=190, Percent_Identity=80, Blast_Score=327, Evalue=3e-91, Organism=Escherichia coli, GI1790590, Length=186, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EFPL_SERP5 (A8GGU5)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001479463.1 - STRING: A8GGU5 - GeneID: 5606362 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_3237 - eggNOG: COG0231 - HOGENOM: HBG303311 - OMA: FMDNEDY - BioCyc: SPRO399741:SPRO_3237-MONOMER - HAMAP: MF_00646 - InterPro: IPR015365 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR020599 - InterPro: IPR013185 - InterPro: IPR011897 - InterPro: IPR001059 - InterPro: IPR013852 - InterPro: IPR014722 - InterPro: IPR008991 - Gene3D: G3DSA:2.40.50.140 - Gene3D: G3DSA:2.30.30.30 - PIRSF: PIRSF005901 - SMART: SM00841 - TIGRFAMs: TIGR02178
Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like
EC number: NA
Molecular weight: Translated: 21260; Mature: 21128
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS01275 EFP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKANEIKRGMAISYNGKLLLVRDIDVQSPSARGASTLYKMRFSDVRTGLKVEERFKGDD CCCHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCHHEEEEEHHHHHCCCEEHHHCCCCC ILDTISLSRRKVNFSYIDGEEYVFMDDEDYTPYIFKKDQIEDELLFIPEAGLPGMQVLTL HHHHHHCCEEEEEEEEECCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEE EGQVLALELPQTVDMEIVDTAPGIKGASASARNKPATMATGLTIQVPEYLSAGDKIRIHI CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEECCHHHCCCCEEEEEE AERRYMSRAD ECCCCCCCCC >Mature Secondary Structure AKANEIKRGMAISYNGKLLLVRDIDVQSPSARGASTLYKMRFSDVRTGLKVEERFKGDD CCHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCHHEEEEEHHHHHCCCEEHHHCCCCC ILDTISLSRRKVNFSYIDGEEYVFMDDEDYTPYIFKKDQIEDELLFIPEAGLPGMQVLTL HHHHHHCCEEEEEEEEECCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEE EGQVLALELPQTVDMEIVDTAPGIKGASASARNKPATMATGLTIQVPEYLSAGDKIRIHI CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEECCHHHCCCCEEEEEE AERRYMSRAD ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA