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The map label for this gene is 157371249

Identifier: 157371249

GI number: 157371249

Start: 3309777

End: 3310592

Strand: Direct

Name: 157371249

Synonym: Spro_3009

Alternate gene names: NA

Gene position: 3309777-3310592 (Clockwise)

Preceding gene: 157371248

Following gene: 157371250

Centisome position: 60.74

GC content: 62.38

Gene sequence:

>816_bases
GTGAAATCATTAACAAACATGTTGCAAGGCGGCACGGTCAGCGCCGCTATCGGCGCAGTGGAAAATGAAATCAAAGCGCG
ACCGGCGGATGCCGATCTGCGTGCCGCTCTGGTGCAACTGCTGTGTCTGGCCGGCAACTGGCAGCGCGCCAATGCGCAGC
TGAAATCCTGGCAGGCATTGAAGCCCATCGCCCAGCCCACCACATTGCTGTTAATGCAATCGGTCAACGCGGAACTGCAG
CGTCAGGCGGTGTTCGCCGGCGAGGCCCCTCCCGCGCTGCTGCAACAAAGTCAGCCCTGGTTGCAACCCATGATCCAGGC
GTTGCGTCACGATGCCCTGGGCGAAACCGAACAGGCGCAGGCATTGCGCGACGACGCGCTGGAAGCGGCACCGGCCAGTG
CCGGGCAACTGACCCTGGCTGAACGGCCACAGCCCGTGGCGTTTGATTGGTTGACCGACGGTGATGGTCGTCTCGGCCCG
GTTTGCGAACTGGCATTGAACGGCACCTATTACTGGCTGCCGTTCGCCGAGATTGCGGAAATTCAGTTCCAGGCCCCACA
AAGCGCCGTCGATCTGGTGTGGAGCCACGCACTGGTGCGACTGAACGACGGTCGCGAGCAGGTCTGCCAGCTGCCTGCCC
GCTATCCCCTGAACGCAGGCAGTGACGATGCGCTGTTGCTCGGCAAACGCACCGAATGGCAAGCGCTGGGCGAAGGGCCG
CACTACGCCGGTCAGGGTCTGAAAACCTGGCTGAGCGAGAACGATGAGTTCCCGCTACACAGCCTGCGCCACCTGAGTTT
TAACGCGAGCGCCTGA

Upstream 100 bases:

>100_bases
TCAAGCTGGTGGAAAAGCTGGCCGACGATCGTCTTGACCCTGCCAGTGGCAGCTACCTGTCGGTTAACAACGCCACTCAC
TGATTATTAAGGAAAGCCCT

Downstream 100 bases:

>100_bases
CGATGAACAGCAAGCGGCCAACCCAACATGATGATGGTGACCTGCGCCGTCAGGGCTATCGCTCCCGCCAGGACAGCGAA
CGCCTGACCTCGCGCGACAA

Product: virulence protein SciE type

Products: NA

Alternate protein names: ImpE Family Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpE; SciE Type Virulence Protein; ImpE-Like Protein; ImpE Protein Superfamily Protein; Secretion Protein; Virulence Protein SciE Type Family Protein; ImpE Protein; Cytoplasmic Protein SciE; ImpE Family T6SS E

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKSLTNMLQGGTVSAAIGAVENEIKARPADADLRAALVQLLCLAGNWQRANAQLKSWQALKPIAQPTTLLLMQSVNAELQ
RQAVFAGEAPPALLQQSQPWLQPMIQALRHDALGETEQAQALRDDALEAAPASAGQLTLAERPQPVAFDWLTDGDGRLGP
VCELALNGTYYWLPFAEIAEIQFQAPQSAVDLVWSHALVRLNDGREQVCQLPARYPLNAGSDDALLLGKRTEWQALGEGP
HYAGQGLKTWLSENDEFPLHSLRHLSFNASA

Sequences:

>Translated_271_residues
MKSLTNMLQGGTVSAAIGAVENEIKARPADADLRAALVQLLCLAGNWQRANAQLKSWQALKPIAQPTTLLLMQSVNAELQ
RQAVFAGEAPPALLQQSQPWLQPMIQALRHDALGETEQAQALRDDALEAAPASAGQLTLAERPQPVAFDWLTDGDGRLGP
VCELALNGTYYWLPFAEIAEIQFQAPQSAVDLVWSHALVRLNDGREQVCQLPARYPLNAGSDDALLLGKRTEWQALGEGP
HYAGQGLKTWLSENDEFPLHSLRHLSFNASA
>Mature_271_residues
MKSLTNMLQGGTVSAAIGAVENEIKARPADADLRAALVQLLCLAGNWQRANAQLKSWQALKPIAQPTTLLLMQSVNAELQ
RQAVFAGEAPPALLQQSQPWLQPMIQALRHDALGETEQAQALRDDALEAAPASAGQLTLAERPQPVAFDWLTDGDGRLGP
VCELALNGTYYWLPFAEIAEIQFQAPQSAVDLVWSHALVRLNDGREQVCQLPARYPLNAGSDDALLLGKRTEWQALGEGP
HYAGQGLKTWLSENDEFPLHSLRHLSFNASA

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29485; Mature: 29485

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTNMLQGGTVSAAIGAVENEIKARPADADLRAALVQLLCLAGNWQRANAQLKSWQAL
CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KPIAQPTTLLLMQSVNAELQRQAVFAGEAPPALLQQSQPWLQPMIQALRHDALGETEQAQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
ALRDDALEAAPASAGQLTLAERPQPVAFDWLTDGDGRLGPVCELALNGTYYWLPFAEIAE
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEECHHHHHH
IQFQAPQSAVDLVWSHALVRLNDGREQVCQLPARYPLNAGSDDALLLGKRTEWQALGEGP
HHHCCCHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHCCCCC
HYAGQGLKTWLSENDEFPLHSLRHLSFNASA
CCCHHHHHHHHCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKSLTNMLQGGTVSAAIGAVENEIKARPADADLRAALVQLLCLAGNWQRANAQLKSWQAL
CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KPIAQPTTLLLMQSVNAELQRQAVFAGEAPPALLQQSQPWLQPMIQALRHDALGETEQAQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
ALRDDALEAAPASAGQLTLAERPQPVAFDWLTDGDGRLGPVCELALNGTYYWLPFAEIAE
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEECHHHHHH
IQFQAPQSAVDLVWSHALVRLNDGREQVCQLPARYPLNAGSDDALLLGKRTEWQALGEGP
HHHCCCHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHCCCCC
HYAGQGLKTWLSENDEFPLHSLRHLSFNASA
CCCHHHHHHHHCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA