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The map label for this gene is 157371250

Identifier: 157371250

GI number: 157371250

Start: 3310595

End: 3311170

Strand: Direct

Name: 157371250

Synonym: Spro_3010

Alternate gene names: NA

Gene position: 3310595-3311170 (Clockwise)

Preceding gene: 157371249

Following gene: 157371251

Centisome position: 60.76

GC content: 58.33

Gene sequence:

>576_bases
ATGAACAGCAAGCGGCCAACCCAACATGATGATGGTGACCTGCGCCGTCAGGGCTATCGCTCCCGCCAGGACAGCGAACG
CCTGACCTCGCGCGACAAAATGCAGCCGGTGCTGCTCGACATGCTGACCGACGACGAACCGCAGAAAAAAAAGGAAGCTC
AGGTGCGCAACCTGGTCTCGCACAGCGAACTGCGCCGTCGGGTGCTGCGCGACCTGCAGTGGCTGTTTAACTGCGTGAAC
AGCGAAGCCAGTCTCGATTTGGGCGATTTTCCGCAGGTACGGCGTTCAACCCTGAACTACGGCATCGCCTCGCTGGCCGG
CAAACGCATGTCAGACATCGAATGGCAGGATATCCAGTTGGCGCTGACCGAATCCATCCTCAATTTCGAACCGCGCATCC
TGCCCGAAGGGCTGCAGGTGCGCTGCATTTCAGATACCGGCTCGCTGGAGCTGCACAACGTATTGTCGATTGAAATCAAG
GGGCGCCTGTGGTGTGTGCCCTATCCGCTGGAGTTTCTGTTCCGTACCGACGTGGACCTGGAGAACGGCCACTTCGATCT
GAAAGACATAGGGTAA

Upstream 100 bases:

>100_bases
CGCACTACGCCGGTCAGGGTCTGAAAACCTGGCTGAGCGAGAACGATGAGTTCCCGCTACACAGCCTGCGCCACCTGAGT
TTTAACGCGAGCGCCTGACG

Downstream 100 bases:

>100_bases
GCCGATGGACAGTAAACTTTTAGACTATTACAACCGCGAGCTGGCCTATCTGCGTGAGATGGGCGCAGAGTTCGCCGAGC
AATATCCCAAAGTGGCAGGC

Product: GPW/gp25 family protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Type VI Secretion System Protein ImpF; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Related Family; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNSKRPTQHDDGDLRRQGYRSRQDSERLTSRDKMQPVLLDMLTDDEPQKKKEAQVRNLVSHSELRRRVLRDLQWLFNCVN
SEASLDLGDFPQVRRSTLNYGIASLAGKRMSDIEWQDIQLALTESILNFEPRILPEGLQVRCISDTGSLELHNVLSIEIK
GRLWCVPYPLEFLFRTDVDLENGHFDLKDIG

Sequences:

>Translated_191_residues
MNSKRPTQHDDGDLRRQGYRSRQDSERLTSRDKMQPVLLDMLTDDEPQKKKEAQVRNLVSHSELRRRVLRDLQWLFNCVN
SEASLDLGDFPQVRRSTLNYGIASLAGKRMSDIEWQDIQLALTESILNFEPRILPEGLQVRCISDTGSLELHNVLSIEIK
GRLWCVPYPLEFLFRTDVDLENGHFDLKDIG
>Mature_191_residues
MNSKRPTQHDDGDLRRQGYRSRQDSERLTSRDKMQPVLLDMLTDDEPQKKKEAQVRNLVSHSELRRRVLRDLQWLFNCVN
SEASLDLGDFPQVRRSTLNYGIASLAGKRMSDIEWQDIQLALTESILNFEPRILPEGLQVRCISDTGSLELHNVLSIEIK
GRLWCVPYPLEFLFRTDVDLENGHFDLKDIG

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22179; Mature: 22179

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKRPTQHDDGDLRRQGYRSRQDSERLTSRDKMQPVLLDMLTDDEPQKKKEAQVRNLVS
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH
HSELRRRVLRDLQWLFNCVNSEASLDLGDFPQVRRSTLNYGIASLAGKRMSDIEWQDIQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALTESILNFEPRILPEGLQVRCISDTGSLELHNVLSIEIKGRLWCVPYPLEFLFRTDVDL
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCEEEEECCCHHHHHHCCCCC
ENGHFDLKDIG
CCCCEECCCCC
>Mature Secondary Structure
MNSKRPTQHDDGDLRRQGYRSRQDSERLTSRDKMQPVLLDMLTDDEPQKKKEAQVRNLVS
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH
HSELRRRVLRDLQWLFNCVNSEASLDLGDFPQVRRSTLNYGIASLAGKRMSDIEWQDIQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ALTESILNFEPRILPEGLQVRCISDTGSLELHNVLSIEIKGRLWCVPYPLEFLFRTDVDL
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCEEEEECCCHHHHHHCCCCC
ENGHFDLKDIG
CCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA