Click here to switch to the map view.

The map label for this gene is 157371242

Identifier: 157371242

GI number: 157371242

Start: 3302089

End: 3303114

Strand: Direct

Name: 157371242

Synonym: Spro_3002

Alternate gene names: NA

Gene position: 3302089-3303114 (Clockwise)

Preceding gene: 157371241

Following gene: 157371243

Centisome position: 60.6

GC content: 61.89

Gene sequence:

>1026_bases
ATGGCTATCGACACCCTGTTAGCCCCGGTTGACGCAGAAAATCCCTGCGGCGAAAACCTGGAATATGACACCGATTTTCT
GGCGATGGAGCAGGCTGCGACCGGTAAGAGCGAGCAGCAGTTCGGCAGCACTATCATTCCGGCAGAAGCACCGGACTGGG
TGCAGGTGGAACGGCTCGCGACCACGCTGCTGATGCGTACCAAAGATTTACGGGTGATGCTGTGCCTGACCCGCGCCTGG
ACGCAACTGCGCGGATTGCAAGGTTACGCCGACGGTCTGATGCTGATCCACCAGGCGCTGGAGCGCTACTGGGACACGCT
GCTGCCGTTGCTGGAGTTCGACGGCGAGGCTGACCCGCTGTTTCGCATCAACGTGCTGGCCGATCTCGGCGACAAGGCCG
CGCTGACCACCAGCGTGCGCGCCGCGCCGCTGCTGAAAGGGGCTACCGGTGAAATCTCGCTGCGCGACGCCGGGGCCCTG
CTCGACGGCAGTAAGCTCGAGTGCCCGACCTTTCCTGGTGGCCGTGCGCGCCTGCAGGATGAACTGTCTCAGCCGGAGCG
CCCGGAGGCGCAATTGGTGATACGCATCGCCGAAACCCTCGCTGCCATCCGTACTACGGTCACTCGCCATTTAGGCGAAA
GCGCCCTGCCGGAAATGCACAACCTGACAAAAATTTTCGCCCTGGTCGCTCAGTTCGGCCAGGACAGCGCCCCGGCCAGC
GAGTCAGCCGAACAGCCAAATGACGCCGCCGTACCACCGACCAGCGCTGCCGCAGCGGCCCCGGCCGCCACGCTCAACTG
GCGCAGTGCGCAAATACAGTCACGCGACGACGCCCAACTGATGCTGGACAAGGTAAAACACTATTTCCGTCTTCATGAGC
CCAGCCACCCGGCGCCGCTGATGATCGACCGGGTACAGCGGCTGATTGCACTGGACTTTATGCAAATAATCCGCGATTTG
GCACCCGATGGTCTTAACCAACTGGAGACCATTCTAGGTCGCCCCGATAACGAGGAGAACAACTAG

Upstream 100 bases:

>100_bases
TGTTCTCTCTGCTGTTTGAACCCAATGGCTGGGCGCGCCCCGGTCGTGGCGGTCAATATCCGCAGATGTTTGATTAACCT
CGCCTGTTGAAGGAAATTTT

Downstream 100 bases:

>100_bases
CCGCCGACCCCTTTGTTCTCTTAACGATACTCATAACCGCATTTGAACCTGACTCTCCAAGCCGGAAGAGGCGCGTTCCC
AATCGCCATTAGATGGAGTA

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein ImpA Family; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Domain-Containing; ImpA-Related N-Terminal Family Protein; T6ss A; ImpA Domain Protein; ImpA-Like; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion-Associated Protein; Conserved Protein; Type VI Secretion System Protein ImpA; ImpA-Like Protein

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MAIDTLLAPVDAENPCGENLEYDTDFLAMEQAATGKSEQQFGSTIIPAEAPDWVQVERLATTLLMRTKDLRVMLCLTRAW
TQLRGLQGYADGLMLIHQALERYWDTLLPLLEFDGEADPLFRINVLADLGDKAALTTSVRAAPLLKGATGEISLRDAGAL
LDGSKLECPTFPGGRARLQDELSQPERPEAQLVIRIAETLAAIRTTVTRHLGESALPEMHNLTKIFALVAQFGQDSAPAS
ESAEQPNDAAVPPTSAAAAAPAATLNWRSAQIQSRDDAQLMLDKVKHYFRLHEPSHPAPLMIDRVQRLIALDFMQIIRDL
APDGLNQLETILGRPDNEENN

Sequences:

>Translated_341_residues
MAIDTLLAPVDAENPCGENLEYDTDFLAMEQAATGKSEQQFGSTIIPAEAPDWVQVERLATTLLMRTKDLRVMLCLTRAW
TQLRGLQGYADGLMLIHQALERYWDTLLPLLEFDGEADPLFRINVLADLGDKAALTTSVRAAPLLKGATGEISLRDAGAL
LDGSKLECPTFPGGRARLQDELSQPERPEAQLVIRIAETLAAIRTTVTRHLGESALPEMHNLTKIFALVAQFGQDSAPAS
ESAEQPNDAAVPPTSAAAAAPAATLNWRSAQIQSRDDAQLMLDKVKHYFRLHEPSHPAPLMIDRVQRLIALDFMQIIRDL
APDGLNQLETILGRPDNEENN
>Mature_340_residues
AIDTLLAPVDAENPCGENLEYDTDFLAMEQAATGKSEQQFGSTIIPAEAPDWVQVERLATTLLMRTKDLRVMLCLTRAWT
QLRGLQGYADGLMLIHQALERYWDTLLPLLEFDGEADPLFRINVLADLGDKAALTTSVRAAPLLKGATGEISLRDAGALL
DGSKLECPTFPGGRARLQDELSQPERPEAQLVIRIAETLAAIRTTVTRHLGESALPEMHNLTKIFALVAQFGQDSAPASE
SAEQPNDAAVPPTSAAAAAPAATLNWRSAQIQSRDDAQLMLDKVKHYFRLHEPSHPAPLMIDRVQRLIALDFMQIIRDLA
PDGLNQLETILGRPDNEENN

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37375; Mature: 37244

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDTLLAPVDAENPCGENLEYDTDFLAMEQAATGKSEQQFGSTIIPAEAPDWVQVERLA
CCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCEECCCCCCCHHHHHHHH
TTLLMRTKDLRVMLCLTRAWTQLRGLQGYADGLMLIHQALERYWDTLLPLLEFDGEADPL
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
FRINVLADLGDKAALTTSVRAAPLLKGATGEISLRDAGALLDGSKLECPTFPGGRARLQD
EEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
ELSQPERPEAQLVIRIAETLAAIRTTVTRHLGESALPEMHNLTKIFALVAQFGQDSAPAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHCCCCCCCC
ESAEQPNDAAVPPTSAAAAAPAATLNWRSAQIQSRDDAQLMLDKVKHYFRLHEPSHPAPL
CCCCCCCCCCCCCCCHHHHCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
MIDRVQRLIALDFMQIIRDLAPDGLNQLETILGRPDNEENN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AIDTLLAPVDAENPCGENLEYDTDFLAMEQAATGKSEQQFGSTIIPAEAPDWVQVERLA
CCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCEECCCCCCCHHHHHHHH
TTLLMRTKDLRVMLCLTRAWTQLRGLQGYADGLMLIHQALERYWDTLLPLLEFDGEADPL
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
FRINVLADLGDKAALTTSVRAAPLLKGATGEISLRDAGALLDGSKLECPTFPGGRARLQD
EEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
ELSQPERPEAQLVIRIAETLAAIRTTVTRHLGESALPEMHNLTKIFALVAQFGQDSAPAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHCCCCCCCC
ESAEQPNDAAVPPTSAAAAAPAATLNWRSAQIQSRDDAQLMLDKVKHYFRLHEPSHPAPL
CCCCCCCCCCCCCCCHHHHCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
MIDRVQRLIALDFMQIIRDLAPDGLNQLETILGRPDNEENN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA