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The map label for this gene is 157371243

Identifier: 157371243

GI number: 157371243

Start: 3303219

End: 3303755

Strand: Direct

Name: 157371243

Synonym: Spro_3003

Alternate gene names: NA

Gene position: 3303219-3303755 (Clockwise)

Preceding gene: 157371242

Following gene: 157371244

Centisome position: 60.62

GC content: 54.75

Gene sequence:

>537_bases
ATGCCAAACTCGAAATCCCGTAGCGGGCAGAAATTTATCGCCCGCAACCGCGCACCGCGCGTACAGATTGAATACGATGT
CGAAATTTATGGCGCAGAGCGCAAAATCCAGTTGCCGTTCGTGATGGGCGTGATGGCAGACCTGGTGGGGAAATCGGTTG
ATCCACAGGCGAGCGTTGATGAGCGCAAGTTCCTGGAGATCGACATCGACAACTTCGATGAACGCATGAAATCGCTGAAA
CCGCGCGTTGCCTATCAGGTCGACAACACCCTGACCGGCGAAGGCAAACTGAATATCGATCTGACGTTTGAAAGCATGGA
AGACTTCTCCCCTGCGGCGATTGCCCGCAAGGTGGACGCGCTGGACAACCTGCTGGACGCCCGCACCCAGCTTTCCAACC
TGTTGTCTTATATGGATGGTAAAAACGGCGCTGAAGAACTGATCTCCAAAATCCTGCAAAACCCGGCCTTACTGCAATCC
CTGACCGATGCGCCGAAACCGGCCGCCACGGACGACAACAATCAGCGTGAGGACTAA

Upstream 100 bases:

>100_bases
CGACCCCTTTGTTCTCTTAACGATACTCATAACCGCATTTGAACCTGACTCTCCAAGCCGGAAGAGGCGCGTTCCCAATC
GCCATTAGATGGAGTAAATC

Downstream 100 bases:

>100_bases
TCGATGAGCAACTCGCCTCAGCAACAAAAAGCGCTGCAGACCAGCGAAGCTTTCTCCAGCGATGAATTCAGCGCGCTGCT
GAACAAAGAGTTTCGTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKSVDPQASVDERKFLEIDIDNFDERMKSLK
PRVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDALDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLQS
LTDAPKPAATDDNNQRED

Sequences:

>Translated_178_residues
MPNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKSVDPQASVDERKFLEIDIDNFDERMKSLK
PRVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDALDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLQS
LTDAPKPAATDDNNQRED
>Mature_177_residues
PNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKSVDPQASVDERKFLEIDIDNFDERMKSLKP
RVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDALDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLQSL
TDAPKPAATDDNNQRED

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19906; Mature: 19774

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKSVDPQASVD
CCCCCCCCCHHHHHCCCCCEEEEEEEEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCCC
ERKFLEIDIDNFDERMKSLKPRVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDA
CCEEEEEECCCHHHHHHHCCCCEEEEECCEECCCCEEEEEEEECCHHCCCHHHHHHHHHH
LDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLQSLTDAPKPAATDDNNQRED
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKSVDPQASVD
CCCCCCCCHHHHHCCCCCEEEEEEEEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCCC
ERKFLEIDIDNFDERMKSLKPRVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDA
CCEEEEEECCCHHHHHHHCCCCEEEEECCEECCCCEEEEEEEECCHHCCCHHHHHHHHHH
LDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLQSLTDAPKPAATDDNNQRED
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA