| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is epsJ [H]
Identifier: 157371126
GI number: 157371126
Start: 3168641
End: 3169630
Strand: Reverse
Name: epsJ [H]
Synonym: Spro_2886
Alternate gene names: 157371126
Gene position: 3169630-3168641 (Counterclockwise)
Preceding gene: 157371127
Following gene: 157371125
Centisome position: 58.17
GC content: 59.7
Gene sequence:
>990_bases ATGAATATCACTCTGAGCCTGATTATTCCGGTGTATAAGGTCGAGGCTTATATTGAGGCTTGCCTGTGCTCAGTGCTGCA ACAACTGCCGGACTGGGCGGAAGTGATCATCGTGGATGACGGCAGTCCGGATGGCGCTATCGGCATTGCCGAAGAGGTGC TGTGCCGCTATCCGCAGCACAAACTGCGGGTCAGTATTCTGCGTCAGCAAAACCAGGGGCTGAGCGAGGCACGCAACAGC GGCATTGCCCATGCCGAAGGACGCTATATCGGCTTCCTCGACTCTGACGATGTGCTGCTGGAAGGGTATTTCAGCATTTT GGGGCGCCTGCTGGCGGATAACCCTTTGGCAGACATCGTCGCCTTCAATGCCCAGCGTTTTTCGGTTTTCAACAACGGCA AGATCCAGCCGGACGGCACCCTGGCCATCGTACCGGGCAATGCCGCCCCCCAGCAGCGTGATGCCCATATGGCGCTGCTG GCGGACAGCTTCAACCGCAGCCTGTGGTACGCCTGGGCGCGTATTTACCGCAAAACGCTGTTCGAGCAGGCCCGCTTCCC GGCGGGGCGCAATTTCGAAGATATTCAGCTGATCCCGCAACTGTACCTGAAAGCGGAACGTATCGTGTTGTGCGACACGC CGCTGGTGGGTTACCGCGCCAACCCGAATGGCATTACGCGTGCGCCTAAGCGCCGCGATCTGGACGATCTGGATTATGCG CTCGGCGGTGCCGACACGGGACGCCGGGAGGGAGTGGGCCATGGGCTGTACTCGGTACTCTTCGTTACCACGCTGAAGGC GCGTTTGCTGGTCGGGCTGGATTTTTTCGGGCTGCGTGACGCGCTGCGCGAAACCCGCGAGCTGAAACGCCGCTACTCCG GCCTGCGGGCAGAGGAGCGCAAAATGCTGAGCCGCAAGAATCGGCTGTTTTACCGCAGCCCGCTGGCTTACTACCTGATG GCCCGGCTGTATAACCTACGGGTGAAATAA
Upstream 100 bases:
>100_bases GCAGGCGCAAGGGCAACGGCAGATTGAGGCCGAGTTGCCGTCGATGGGCAGCCGGGCAGTTTGGGTGCAACTTCAAAAAG AAAAGAAAGGATAACCGATC
Downstream 100 bases:
>100_bases AACTATGAGTATTACCGTCAGCGTCATCATACCCACCTATGGCCGCAGTGAACTGTTGGCACGCGCCATCGACAGCGTGC TGGCGCAAACCCATCGCCCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNITLSLIIPVYKVEAYIEACLCSVLQQLPDWAEVIIVDDGSPDGAIGIAEEVLCRYPQHKLRVSILRQQNQGLSEARNS GIAHAEGRYIGFLDSDDVLLEGYFSILGRLLADNPLADIVAFNAQRFSVFNNGKIQPDGTLAIVPGNAAPQQRDAHMALL ADSFNRSLWYAWARIYRKTLFEQARFPAGRNFEDIQLIPQLYLKAERIVLCDTPLVGYRANPNGITRAPKRRDLDDLDYA LGGADTGRREGVGHGLYSVLFVTTLKARLLVGLDFFGLRDALRETRELKRRYSGLRAEERKMLSRKNRLFYRSPLAYYLM ARLYNLRVK
Sequences:
>Translated_329_residues MNITLSLIIPVYKVEAYIEACLCSVLQQLPDWAEVIIVDDGSPDGAIGIAEEVLCRYPQHKLRVSILRQQNQGLSEARNS GIAHAEGRYIGFLDSDDVLLEGYFSILGRLLADNPLADIVAFNAQRFSVFNNGKIQPDGTLAIVPGNAAPQQRDAHMALL ADSFNRSLWYAWARIYRKTLFEQARFPAGRNFEDIQLIPQLYLKAERIVLCDTPLVGYRANPNGITRAPKRRDLDDLDYA LGGADTGRREGVGHGLYSVLFVTTLKARLLVGLDFFGLRDALRETRELKRRYSGLRAEERKMLSRKNRLFYRSPLAYYLM ARLYNLRVK >Mature_329_residues MNITLSLIIPVYKVEAYIEACLCSVLQQLPDWAEVIIVDDGSPDGAIGIAEEVLCRYPQHKLRVSILRQQNQGLSEARNS GIAHAEGRYIGFLDSDDVLLEGYFSILGRLLADNPLADIVAFNAQRFSVFNNGKIQPDGTLAIVPGNAAPQQRDAHMALL ADSFNRSLWYAWARIYRKTLFEQARFPAGRNFEDIQLIPQLYLKAERIVLCDTPLVGYRANPNGITRAPKRRDLDDLDYA LGGADTGRREGVGHGLYSVLFVTTLKARLLVGLDFFGLRDALRETRELKRRYSGLRAEERKMLSRKNRLFYRSPLAYYLM ARLYNLRVK
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=243, Percent_Identity=26.3374485596708, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 37256; Mature: 37256
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITLSLIIPVYKVEAYIEACLCSVLQQLPDWAEVIIVDDGSPDGAIGIAEEVLCRYPQH CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHH KLRVSILRQQNQGLSEARNSGIAHAEGRYIGFLDSDDVLLEGYFSILGRLLADNPLADIV HHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH AFNAQRFSVFNNGKIQPDGTLAIVPGNAAPQQRDAHMALLADSFNRSLWYAWARIYRKTL HHCCHHEEEECCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH FEQARFPAGRNFEDIQLIPQLYLKAERIVLCDTPLVGYRANPNGITRAPKRRDLDDLDYA HHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHH LGGADTGRREGVGHGLYSVLFVTTLKARLLVGLDFFGLRDALRETRELKRRYSGLRAEER HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH KMLSRKNRLFYRSPLAYYLMARLYNLRVK HHHHHHCCEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MNITLSLIIPVYKVEAYIEACLCSVLQQLPDWAEVIIVDDGSPDGAIGIAEEVLCRYPQH CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHH KLRVSILRQQNQGLSEARNSGIAHAEGRYIGFLDSDDVLLEGYFSILGRLLADNPLADIV HHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH AFNAQRFSVFNNGKIQPDGTLAIVPGNAAPQQRDAHMALLADSFNRSLWYAWARIYRKTL HHCCHHEEEECCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH FEQARFPAGRNFEDIQLIPQLYLKAERIVLCDTPLVGYRANPNGITRAPKRRDLDDLDYA HHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHH LGGADTGRREGVGHGLYSVLFVTTLKARLLVGLDFFGLRDALRETRELKRRYSGLRAEER HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH KMLSRKNRLFYRSPLAYYLMARLYNLRVK HHHHHHCCEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]