| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371127
Identifier: 157371127
GI number: 157371127
Start: 3169637
End: 3171514
Strand: Reverse
Name: 157371127
Synonym: Spro_2887
Alternate gene names: NA
Gene position: 3171514-3169637 (Counterclockwise)
Preceding gene: 157371128
Following gene: 157371126
Centisome position: 58.21
GC content: 59.53
Gene sequence:
>1878_bases ATGAAACTCAGCAAGCTAACCACCGCCTGCCTGCTGGTAGGCTCCGGGCTGGCCAATGCCGCCCCCTGCGGTAATAACCT GCTGCAGGATCCCGGGTTCGAGCAGGGAGGCGCGGGCTGGTCACTGGCCTCGGCACAGGTGGTAGCGGGCGGCCACGGTG GCCGGAGCAGCCTGTTCTATCAAAATCACAACCCCGCCAACTACCACAACATGCTGCAGACGCTGGCGGTTAAACCGGGT CAGCAGCTGGCTTTTGGCACCTGGGTGCGCGGTGAGAACCTGAAGGGCAAGGGCGAAAATCAGGGCGCCGGGGTGTTTAT CGAAAGCTATGACAGCCAGGGACGTTTTTTGGCCGGCAGCTATCCGCAGGGCCTGCTGGGCACCAGCGGCTGGCAGCCGG TCACGGGGGATTTTCGGGTGCCGCCGCGCGCGGTGAAGGTAGTGCTGGGCGTTTACCTGCGGCGGGGGACTACCGGCAGC GCCTGGTTTGATGACGTCTACGCCTGTCAGCAGCCGGTCGCGCCGGAGCTCTACCAGATGCGCAGTAGCCAGGGGACGGC ATCGAGCCTGATCGAAGTGGTTGATCCGCAGCAGGTGCAGGTGGACAGCACGCTGGTTGACGACAAAAACACCGCCGTGA AACACGACAGCCGCCGTTACCGCATTAGCGGAAAGCAGCAGGTGGAGTTCCCGCTGCCTGCCGACCTGGCTGCCGGGGAG TATCGTCTACAGCAGCAGGTGACAGATGTAGCCTCACAGCGCAGCCAGAGTAGCGAAATGCCGATCAGCGTCGGCCGTGA ACAGCCTAAAGTGGCGTTGGATGCACAGGGTTATACCCTGAAACAGGGCAAGCGTTTCTTCCCGCTCGGGATTTATATGT ACGGCGAGATGGTGACGGATGAGCATTTGGTACGCATCCGCGATGCCGGTTTCAACACGCTGCTCAATTACAACTACGGC ACCGGACGTGACCCTGATAACTATTTCCGCAAAACCCAGCAGTACGGTTTGCAGGTGATTTTCTCGCTCAAGGACATGTA TGCCGGCACCCGCTTCGCGCCGGAAACCAAAATGAGCTATCCGCAACTGACGGCGAGCTATGTGGAAAGGTTTAAACACC AGCCGAACCTGCTGGCCTGGTATATCAACGATGAGCTGGGGCCGGAATACGTGCCGCAGATTGAGCAAAAGCATCTGCAG GTAAAACGTCTGGATCCGGATCACCTGACGTTCCAGGTGCTGGACAAGACCGGCACGCTCAACGCCTATTTTAACAGTTC GGACGTGCTGGCCAGCGATCCTTACCCGGTCGGCAGGGACGCAGATCTGACGCGGACGCTGGAGTACAGCCGCATTACCA GCCAGGTCGCGCGGCAGGTCAAAGGAGCCTGGCTGGTGATGCAGATTATGGATCACGCCGCTTATGCGCCGGGGCGTAAA CCGCGCCAACCGACGGAGGCAGAGATGCGCAATCAGGCCTGGCTGGGGCTGATTGGCGGCGCTAAAGGCATCCTGTTTTA TTCCTATACCGACTTGTTCTACAAGCGCCAACGCGGCGGCTTTAGCCTGCAGGAGTTTGATGCTATCTGGCGGGGTGTGG CCAGCGTGGCGCAGCAGATTGTCAGCTTTAACCCTTACCTGCTTTCCGGCGAAAGCACCCTGCTGCAGGGCAACAATACC GCCATCCCGGCAAGGTTGTTTATCGACGGTGATAAGGGCCTGGTGCTGATCGCCAATCCTTACTATCGGCCGATGTCGGC GCGCTTTGATTTGCCAACCGGTTGGCAGGCGCAAGGGCAACGGCAGATTGAGGCCGAGTTGCCGTCGATGGGCAGCCGGG CAGTTTGGGTGCAACTTCAAAAAGAAAAGAAAGGATAA
Upstream 100 bases:
>100_bases ACTGGCAATGGCAGATTTATCGCCGTCATCTGGGGCTTTCCTACCAGAAGTCCTGCTATCTGTTCTTCTCTTATCTGTAC AACGCGGTGATGAAACGCCA
Downstream 100 bases:
>100_bases CCGATCATGAATATCACTCTGAGCCTGATTATTCCGGTGTATAAGGTCGAGGCTTATATTGAGGCTTGCCTGTGCTCAGT GCTGCAACAACTGCCGGACT
Product: carbohydrate-binding CenC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MKLSKLTTACLLVGSGLANAAPCGNNLLQDPGFEQGGAGWSLASAQVVAGGHGGRSSLFYQNHNPANYHNMLQTLAVKPG QQLAFGTWVRGENLKGKGENQGAGVFIESYDSQGRFLAGSYPQGLLGTSGWQPVTGDFRVPPRAVKVVLGVYLRRGTTGS AWFDDVYACQQPVAPELYQMRSSQGTASSLIEVVDPQQVQVDSTLVDDKNTAVKHDSRRYRISGKQQVEFPLPADLAAGE YRLQQQVTDVASQRSQSSEMPISVGREQPKVALDAQGYTLKQGKRFFPLGIYMYGEMVTDEHLVRIRDAGFNTLLNYNYG TGRDPDNYFRKTQQYGLQVIFSLKDMYAGTRFAPETKMSYPQLTASYVERFKHQPNLLAWYINDELGPEYVPQIEQKHLQ VKRLDPDHLTFQVLDKTGTLNAYFNSSDVLASDPYPVGRDADLTRTLEYSRITSQVARQVKGAWLVMQIMDHAAYAPGRK PRQPTEAEMRNQAWLGLIGGAKGILFYSYTDLFYKRQRGGFSLQEFDAIWRGVASVAQQIVSFNPYLLSGESTLLQGNNT AIPARLFIDGDKGLVLIANPYYRPMSARFDLPTGWQAQGQRQIEAELPSMGSRAVWVQLQKEKKG
Sequences:
>Translated_625_residues MKLSKLTTACLLVGSGLANAAPCGNNLLQDPGFEQGGAGWSLASAQVVAGGHGGRSSLFYQNHNPANYHNMLQTLAVKPG QQLAFGTWVRGENLKGKGENQGAGVFIESYDSQGRFLAGSYPQGLLGTSGWQPVTGDFRVPPRAVKVVLGVYLRRGTTGS AWFDDVYACQQPVAPELYQMRSSQGTASSLIEVVDPQQVQVDSTLVDDKNTAVKHDSRRYRISGKQQVEFPLPADLAAGE YRLQQQVTDVASQRSQSSEMPISVGREQPKVALDAQGYTLKQGKRFFPLGIYMYGEMVTDEHLVRIRDAGFNTLLNYNYG TGRDPDNYFRKTQQYGLQVIFSLKDMYAGTRFAPETKMSYPQLTASYVERFKHQPNLLAWYINDELGPEYVPQIEQKHLQ VKRLDPDHLTFQVLDKTGTLNAYFNSSDVLASDPYPVGRDADLTRTLEYSRITSQVARQVKGAWLVMQIMDHAAYAPGRK PRQPTEAEMRNQAWLGLIGGAKGILFYSYTDLFYKRQRGGFSLQEFDAIWRGVASVAQQIVSFNPYLLSGESTLLQGNNT AIPARLFIDGDKGLVLIANPYYRPMSARFDLPTGWQAQGQRQIEAELPSMGSRAVWVQLQKEKKG >Mature_625_residues MKLSKLTTACLLVGSGLANAAPCGNNLLQDPGFEQGGAGWSLASAQVVAGGHGGRSSLFYQNHNPANYHNMLQTLAVKPG QQLAFGTWVRGENLKGKGENQGAGVFIESYDSQGRFLAGSYPQGLLGTSGWQPVTGDFRVPPRAVKVVLGVYLRRGTTGS AWFDDVYACQQPVAPELYQMRSSQGTASSLIEVVDPQQVQVDSTLVDDKNTAVKHDSRRYRISGKQQVEFPLPADLAAGE YRLQQQVTDVASQRSQSSEMPISVGREQPKVALDAQGYTLKQGKRFFPLGIYMYGEMVTDEHLVRIRDAGFNTLLNYNYG TGRDPDNYFRKTQQYGLQVIFSLKDMYAGTRFAPETKMSYPQLTASYVERFKHQPNLLAWYINDELGPEYVPQIEQKHLQ VKRLDPDHLTFQVLDKTGTLNAYFNSSDVLASDPYPVGRDADLTRTLEYSRITSQVARQVKGAWLVMQIMDHAAYAPGRK PRQPTEAEMRNQAWLGLIGGAKGILFYSYTDLFYKRQRGGFSLQEFDAIWRGVASVAQQIVSFNPYLLSGESTLLQGNNT AIPARLFIDGDKGLVLIANPYYRPMSARFDLPTGWQAQGQRQIEAELPSMGSRAVWVQLQKEKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69456; Mature: 69456
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKLTTACLLVGSGLANAAPCGNNLLQDPGFEQGGAGWSLASAQVVAGGHGGRSSLFY CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCEEE QNHNPANYHNMLQTLAVKPGQQLAFGTWVRGENLKGKGENQGAGVFIESYDSQGRFLAGS ECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEECC YPQGLLGTSGWQPVTGDFRVPPRAVKVVLGVYLRRGTTGSAWFDDVYACQQPVAPELYQM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH RSSQGTASSLIEVVDPQQVQVDSTLVDDKNTAVKHDSRRYRISGKQQVEFPLPADLAAGE HCCCCCHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCH YRLQQQVTDVASQRSQSSEMPISVGREQPKVALDAQGYTLKQGKRFFPLGIYMYGEMVTD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEEEEEEECCCCCC EHLVRIRDAGFNTLLNYNYGTGRDPDNYFRKTQQYGLQVIFSLKDMYAGTRFAPETKMSY CCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHCCCCCCCCCCCCC PQLTASYVERFKHQPNLLAWYINDELGPEYVPQIEQKHLQVKRLDPDHLTFQVLDKTGTL HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCCCCEEEEEEECCCCE NAYFNSSDVLASDPYPVGRDADLTRTLEYSRITSQVARQVKGAWLVMQIMDHAAYAPGRK EEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PRQPTEAEMRNQAWLGLIGGAKGILFYSYTDLFYKRQRGGFSLQEFDAIWRGVASVAQQI CCCCCHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VSFNPYLLSGESTLLQGNNTAIPARLFIDGDKGLVLIANPYYRPMSARFDLPTGWQAQGQ HCCCCEEECCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC RQIEAELPSMGSRAVWVQLQKEKKG EEHHHHCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKLSKLTTACLLVGSGLANAAPCGNNLLQDPGFEQGGAGWSLASAQVVAGGHGGRSSLFY CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCEEE QNHNPANYHNMLQTLAVKPGQQLAFGTWVRGENLKGKGENQGAGVFIESYDSQGRFLAGS ECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEECC YPQGLLGTSGWQPVTGDFRVPPRAVKVVLGVYLRRGTTGSAWFDDVYACQQPVAPELYQM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH RSSQGTASSLIEVVDPQQVQVDSTLVDDKNTAVKHDSRRYRISGKQQVEFPLPADLAAGE HCCCCCHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCH YRLQQQVTDVASQRSQSSEMPISVGREQPKVALDAQGYTLKQGKRFFPLGIYMYGEMVTD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEEEEEEECCCCCC EHLVRIRDAGFNTLLNYNYGTGRDPDNYFRKTQQYGLQVIFSLKDMYAGTRFAPETKMSY CCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHCCCCCCCCCCCCC PQLTASYVERFKHQPNLLAWYINDELGPEYVPQIEQKHLQVKRLDPDHLTFQVLDKTGTL HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCCCCCEEEEEEECCCCE NAYFNSSDVLASDPYPVGRDADLTRTLEYSRITSQVARQVKGAWLVMQIMDHAAYAPGRK EEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PRQPTEAEMRNQAWLGLIGGAKGILFYSYTDLFYKRQRGGFSLQEFDAIWRGVASVAQQI CCCCCHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VSFNPYLLSGESTLLQGNNTAIPARLFIDGDKGLVLIANPYYRPMSARFDLPTGWQAQGQ HCCCCEEECCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC RQIEAELPSMGSRAVWVQLQKEKKG EEHHHHCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA