| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fimG [H]
Identifier: 157371116
GI number: 157371116
Start: 3156824
End: 3157339
Strand: Direct
Name: fimG [H]
Synonym: Spro_2876
Alternate gene names: 157371116
Gene position: 3156824-3157339 (Clockwise)
Preceding gene: 157371115
Following gene: 157371117
Centisome position: 57.94
GC content: 49.81
Gene sequence:
>516_bases ATGCTGAGGATTATGCGCCACCCGGCGTTATGGATATTGTGCAGTGGTTTAGGCGCCAACGGTTTGGCTCAGGCCGACGC AGTCACGGTCAATATCACCAGCAATGTGATCGCCGCCCCTTGTGTCATTGATGGTGCCGGCTCTCTGGATATTAAACTGG ATGATATCGTGGTCAGCAAATTGCAAAAGTCCGGCGATACTGGCCCTTTCAAAAGTTTCGATTTAAAGCTGAAGGACTGC CCAGCTGCGACCACCAAGGTCACGGCCAGCTACACTGGCACGGCATCCCCTTTATCCGCAAACAGCTTTATAAATACGGG TACGGCAAGTCAACTGGTTCTGTACCTTCAAGATAGCGCCAGTAAAGAAATCGCTCCTAATACCACCCGCCAGGTAGACG TGAACAGCACTTCCAAAACAGCGGTATTTAGTCAAAAGGTGCAGATTTATGCGAAAGGTTTGGCCACTGCCGGCACGGTA ATTGGCAACATTGTTGTGTCCTTTACCTATCAATAA
Upstream 100 bases:
>100_bases AGGACGTCACCGTTGGCAAAGCCAATACTGCCGCCACGCTGAATTTCACCTATCAGTAACTCAATATGTCATTTATGGAA AACACAACAGGAGAAGGAAT
Downstream 100 bases:
>100_bases CTCATAGGCAAAGCCAATACTGCCGCCACGCTGAATATCACCTATCAGTAACTCAATATGTCATTTATGGAAAACACAAC AGGAGAAGGAATATGCTGAG
Product: fimbrial protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLRIMRHPALWILCSGLGANGLAQADAVTVNITSNVIAAPCVIDGAGSLDIKLDDIVVSKLQKSGDTGPFKSFDLKLKDC PAATTKVTASYTGTASPLSANSFINTGTASQLVLYLQDSASKEIAPNTTRQVDVNSTSKTAVFSQKVQIYAKGLATAGTV IGNIVVSFTYQ
Sequences:
>Translated_171_residues MLRIMRHPALWILCSGLGANGLAQADAVTVNITSNVIAAPCVIDGAGSLDIKLDDIVVSKLQKSGDTGPFKSFDLKLKDC PAATTKVTASYTGTASPLSANSFINTGTASQLVLYLQDSASKEIAPNTTRQVDVNSTSKTAVFSQKVQIYAKGLATAGTV IGNIVVSFTYQ >Mature_171_residues MLRIMRHPALWILCSGLGANGLAQADAVTVNITSNVIAAPCVIDGAGSLDIKLDDIVVSKLQKSGDTGPFKSFDLKLKDC PAATTKVTASYTGTASPLSANSFINTGTASQLVLYLQDSASKEIAPNTTRQVDVNSTSKTAVFSQKVQIYAKGLATAGTV IGNIVVSFTYQ
Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family [H]
Homologues:
Organism=Escherichia coli, GI1790774, Length=148, Percent_Identity=31.7567567567568, Blast_Score=73, Evalue=9e-15, Organism=Escherichia coli, GI1787780, Length=172, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 [H]
Pfam domain/function: PF00419 Fimbrial [H]
EC number: NA
Molecular weight: Translated: 17829; Mature: 17829
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIMRHPALWILCSGLGANGLAQADAVTVNITSNVIAAPCVIDGAGSLDIKLDDIVVSK CCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCEEEECCCCEEEEEHHHHHHH LQKSGDTGPFKSFDLKLKDCPAATTKVTASYTGTASPLSANSFINTGTASQLVLYLQDSA HHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEECCCCHHEEEEEEECCC SKEIAPNTTRQVDVNSTSKTAVFSQKVQIYAKGLATAGTVIGNIVVSFTYQ CCCCCCCCCEEEECCCCCCHHHHHHHEEEEECCCCHHHHHEEEEEEEEEEC >Mature Secondary Structure MLRIMRHPALWILCSGLGANGLAQADAVTVNITSNVIAAPCVIDGAGSLDIKLDDIVVSK CCEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCEEECCEEEECCCCEEEEEHHHHHHH LQKSGDTGPFKSFDLKLKDCPAATTKVTASYTGTASPLSANSFINTGTASQLVLYLQDSA HHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEECCCCHHEEEEEEECCC SKEIAPNTTRQVDVNSTSKTAVFSQKVQIYAKGLATAGTVIGNIVVSFTYQ CCCCCCCCCEEEECCCCCCHHHHHHHEEEEECCCCHHHHHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2890081; 7610040; 9278503 [H]