Click here to switch to the map view.

The map label for this gene is ydeQ [C]

Identifier: 157371115

GI number: 157371115

Start: 3155715

End: 3156782

Strand: Direct

Name: ydeQ [C]

Synonym: Spro_2875

Alternate gene names: 157371115

Gene position: 3155715-3156782 (Clockwise)

Preceding gene: 157371114

Following gene: 157371116

Centisome position: 57.92

GC content: 49.53

Gene sequence:

>1068_bases
ATGAATATTCCAATAAAAAAAAGAAGGCTGACAATCGCAACAACATATTGCCTAAAGACGCGATGCCTGGTGGCTGGCGT
CGCGCTGATGGGGTTGTATAGCCAGCAGGGACTGGCGTTTGACTGTCGCCCCAGAACTGCCTCCATTACTTTAGATCTGG
GAAACATTGATCTTAAGAAAGACATCGCAAATTTGACAAATTTGAGCCCCATAATCGACAGCATCGAAACAGGCCATAAC
TGCCTGGCCGATGCTTCATATACACTTTCAGGTGTTAAGGCTTATGGTGCTGATACGGGACAAAAGATAGGGGTGATCAA
AATTTTTGCTTCGAATGTCTCTGGTGTTGGCTTTACCATGGCAGCACGAGAAAGCAACCAATCCTTCTACGCCACCTGGA
TTGGTCAGAGCTACGGATATCCCCCGCGCTTTAATGATGCCGTATTGGTAGCAGGGCGAGGCCCCATCATGCCTCATGGT
TCTCCGCCAGAAGGCTACAACTATAGAATGACGGCATCTATTCAACTGTATAAAACAGGTGATATTGGTTCAGGCACCCT
ATCGGGTAAAATTGGCGCCCTTATTGCCTACCACAACGCCAACCCCCCAAGGTGGGCCACCGAAATTCCCATCTATATCA
CCGGTACCATAACCAAAGCGACCTGTTCTCTCACCAACACCAGTATCAGCGTCCCCTTGGGTGATATCTCCGCCACCAAT
TTCTCCAGTATTGGCGCCACCTTTAGTGAAAAAAAATTCAACGTGGACTTGAACTGTGACCCAGAGATTAAAGTCAGCGT
TTCCCTGAGTGGAACCCAAAGCACCGAAACCACAGATACCAGCGTCCTGGCGCTGACCGGTGCCGGGCAAAGTGGCGTGG
TTAGCGGGCTGGGGGTACAGATATTGTCTGATGGGACATTGCTCAAGCGGGGTACCAACCTACTGGTTAAAACGGTGGCT
GGCGGTAAAGAATCCCTGCAGTTCAGTGCTCGTTACTACCAAACCAAAAAGGACGTCACCGTTGGCAAAGCCAATACTGC
CGCCACGCTGAATTTCACCTATCAGTAA

Upstream 100 bases:

>100_bases
TGCTATGGGGAAACGGCAATACCGGTCAGTGCTGGGTCAATTATCAATTGCCCACCACGCCCCAGCCGGGTGGCGTAGTG
CAAATCAATGAGGTGTGCAG

Downstream 100 bases:

>100_bases
CTCAATATGTCATTTATGGAAAACACAACAGGAGAAGGAATATGCTGAGGATTATGCGCCACCCGGCGTTATGGATATTG
TGCAGTGGTTTAGGCGCCAA

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Adhesin; Fimbrin-Like Protein Fimi; Fimbrial Protein Domain-Containing Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNIPIKKRRLTIATTYCLKTRCLVAGVALMGLYSQQGLAFDCRPRTASITLDLGNIDLKKDIANLTNLSPIIDSIETGHN
CLADASYTLSGVKAYGADTGQKIGVIKIFASNVSGVGFTMAARESNQSFYATWIGQSYGYPPRFNDAVLVAGRGPIMPHG
SPPEGYNYRMTASIQLYKTGDIGSGTLSGKIGALIAYHNANPPRWATEIPIYITGTITKATCSLTNTSISVPLGDISATN
FSSIGATFSEKKFNVDLNCDPEIKVSVSLSGTQSTETTDTSVLALTGAGQSGVVSGLGVQILSDGTLLKRGTNLLVKTVA
GGKESLQFSARYYQTKKDVTVGKANTAATLNFTYQ

Sequences:

>Translated_355_residues
MNIPIKKRRLTIATTYCLKTRCLVAGVALMGLYSQQGLAFDCRPRTASITLDLGNIDLKKDIANLTNLSPIIDSIETGHN
CLADASYTLSGVKAYGADTGQKIGVIKIFASNVSGVGFTMAARESNQSFYATWIGQSYGYPPRFNDAVLVAGRGPIMPHG
SPPEGYNYRMTASIQLYKTGDIGSGTLSGKIGALIAYHNANPPRWATEIPIYITGTITKATCSLTNTSISVPLGDISATN
FSSIGATFSEKKFNVDLNCDPEIKVSVSLSGTQSTETTDTSVLALTGAGQSGVVSGLGVQILSDGTLLKRGTNLLVKTVA
GGKESLQFSARYYQTKKDVTVGKANTAATLNFTYQ
>Mature_355_residues
MNIPIKKRRLTIATTYCLKTRCLVAGVALMGLYSQQGLAFDCRPRTASITLDLGNIDLKKDIANLTNLSPIIDSIETGHN
CLADASYTLSGVKAYGADTGQKIGVIKIFASNVSGVGFTMAARESNQSFYATWIGQSYGYPPRFNDAVLVAGRGPIMPHG
SPPEGYNYRMTASIQLYKTGDIGSGTLSGKIGALIAYHNANPPRWATEIPIYITGTITKATCSLTNTSISVPLGDISATN
FSSIGATFSEKKFNVDLNCDPEIKVSVSLSGTQSTETTDTSVLALTGAGQSGVVSGLGVQILSDGTLLKRGTNLLVKTVA
GGKESLQFSARYYQTKKDVTVGKANTAATLNFTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37576; Mature: 37576

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPIKKRRLTIATTYCLKTRCLVAGVALMGLYSQQGLAFDCRPRTASITLDLGNIDLKK
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEECCCCHHH
DIANLTNLSPIIDSIETGHNCLADASYTLSGVKAYGADTGQKIGVIKIFASNVSGVGFTM
HHHHHCCCHHHHHHHHCCCCEECCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEEE
AARESNQSFYATWIGQSYGYPPRFNDAVLVAGRGPIMPHGSPPEGYNYRMTASIQLYKTG
EEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECC
DIGSGTLSGKIGALIAYHNANPPRWATEIPIYITGTITKATCSLTNTSISVPLGDISATN
CCCCCEECCCEEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEECCCEEEEECCCCCCCC
FSSIGATFSEKKFNVDLNCDPEIKVSVSLSGTQSTETTDTSVLALTGAGQSGVVSGLGVQ
CHHCCCEECCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEECCCEE
ILSDGTLLKRGTNLLVKTVAGGKESLQFSARYYQTKKDVTVGKANTAATLNFTYQ
EEECCEEEECCCCEEEEEECCCCHHEEEEEEEEECCCCEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MNIPIKKRRLTIATTYCLKTRCLVAGVALMGLYSQQGLAFDCRPRTASITLDLGNIDLKK
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEECCCCHHH
DIANLTNLSPIIDSIETGHNCLADASYTLSGVKAYGADTGQKIGVIKIFASNVSGVGFTM
HHHHHCCCHHHHHHHHCCCCEECCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEEE
AARESNQSFYATWIGQSYGYPPRFNDAVLVAGRGPIMPHGSPPEGYNYRMTASIQLYKTG
EEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECC
DIGSGTLSGKIGALIAYHNANPPRWATEIPIYITGTITKATCSLTNTSISVPLGDISATN
CCCCCEECCCEEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEECCCEEEEECCCCCCCC
FSSIGATFSEKKFNVDLNCDPEIKVSVSLSGTQSTETTDTSVLALTGAGQSGVVSGLGVQ
CHHCCCEECCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEECCCEE
ILSDGTLLKRGTNLLVKTVAGGKESLQFSARYYQTKKDVTVGKANTAATLNFTYQ
EEECCEEEECCCCEEEEEECCCCHHEEEEEEEEECCCCEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA