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The map label for this gene is yraI [H]

Identifier: 157371113

GI number: 157371113

Start: 3152467

End: 3153147

Strand: Direct

Name: yraI [H]

Synonym: Spro_2873

Alternate gene names: 157371113

Gene position: 3152467-3153147 (Clockwise)

Preceding gene: 157371112

Following gene: 157371114

Centisome position: 57.86

GC content: 52.57

Gene sequence:

>681_bases
ATGAAAGCATTGCAGGTCGCGCTGTACCTTGGGTTGATATTGAGCAGCAGTCTGGTACAGGCTGGTGTGGTGATTGGGGC
AACCCGAGTGGTGTACGACGGCGGATTGCGGGAATCCTCATTAAGCGTCAGTAACCCGGATAAAGTCCCTTACCTGATCC
AGTCCTGGGTCGATCCACAAACCGCAGGCAGCGAGAAAGCCCCGTTTATCCTGACACCCCCACTGTTTCGTTTAGAAGGG
GGGGACAAGAACGTACTGCGAATAGTGCGCCTGGGCGGCAATTTGCCAAAAGACCGTGAATCGCTGTACTGGTTGAATGT
GAAAGCCATTCCTTCGTCTGAGAATAAAGACAATACCCTCCAAATAGCGGTGAACACCCGCATCAAACTGATATATCGCC
CAGAACAGTTGAAAGACAAATCGCCGGAGGCGGTTGCCGGGCAATTGAGCTGGTCACGGCAAGGCGGAAAATTGCGGGTC
AACAACCCTACACCGTATTACATGAACTTTCAGAGTGTGAAGATCGAGGGGCAAGAGGTGCGGGATGCAACCTATGTCGC
GCCATTCAGCAGTGCGGATTTTGCTTTGCAAGAAGTGAAAGCAGGCAATGCGGTGAGTTGGATCGTTATCAACGATTTTG
GCGGTAGCGGTGCCACCCTGCAAGGCAGATTAGCAGGGTGA

Upstream 100 bases:

>100_bases
CAACGTCAAGTACAACTAAACGCGAATTCGGCCTCTTTGAGGTTGTTTGACTTTGCAGGGACTGCCCGCCGGGTCGTCCC
TTTTCAGGGAGAAACTGGGC

Downstream 100 bases:

>100_bases
TGTTGGCTCTTCACAGTGAGGTGAAAAGGCAAACAAGGGAGTGTAGCAATGAGCACGGAAACAGACCGACGATATCGCCA
AGTGCCTCTGGCGGGGCTAA

Product: pili assembly chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQTAGSEKAPFILTPPLFRLEG
GDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTLQIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRV
NNPTPYYMNFQSVKIEGQEVRDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG

Sequences:

>Translated_226_residues
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQTAGSEKAPFILTPPLFRLEG
GDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTLQIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRV
NNPTPYYMNFQSVKIEGQEVRDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG
>Mature_226_residues
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQTAGSEKAPFILTPPLFRLEG
GDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTLQIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRV
NNPTPYYMNFQSVKIEGQEVRDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG

Specific function: Could be required for the biogenesis of the putative yraH fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1789532, Length=228, Percent_Identity=39.9122807017544, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1790771, Length=222, Percent_Identity=39.1891891891892, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1787171, Length=209, Percent_Identity=39.7129186602871, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1786743, Length=220, Percent_Identity=33.6363636363636, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786333, Length=234, Percent_Identity=35.8974358974359, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786936, Length=192, Percent_Identity=34.375, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI87081806, Length=223, Percent_Identity=30.9417040358744, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082203, Length=216, Percent_Identity=31.0185185185185, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788677, Length=145, Percent_Identity=36.551724137931, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788428, Length=225, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 24605; Mature: 24605

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQ
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCC
TAGSEKAPFILTPPLFRLEGGDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTL
CCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEE
QIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRVNNPTPYYMNFQSVKIEGQEV
EEEEECEEEEEECCHHHCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEEECCCCC
RDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG
CCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQ
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCC
TAGSEKAPFILTPPLFRLEGGDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTL
CCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEE
QIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRVNNPTPYYMNFQSVKIEGQEV
EEEEECEEEEEECCHHHCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEEECCCCC
RDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG
CCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]