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The map label for this gene is lpfA [H]

Identifier: 157371112

GI number: 157371112

Start: 3151840

End: 3152385

Strand: Direct

Name: lpfA [H]

Synonym: Spro_2872

Alternate gene names: 157371112

Gene position: 3151840-3152385 (Clockwise)

Preceding gene: 157371111

Following gene: 157371113

Centisome position: 57.84

GC content: 51.1

Gene sequence:

>546_bases
ATGAAAAAAACACTTCTGGTCACTTCATTGGCTACGATCGCATTATTTTCGACCGCTTCGGCATTTGCTGCTGACGGTAA
CATCAACTTCACGGGTGATATCAAAGATGCAACCTGTGAGGTCGATTTGGCTGCGGGAGCAACGGCGATCAGTGTCCCTA
TGGGAACGCTGAATAAAACGGCCTTTTCAGGGGCCGGCTCTACCGGTACCTCCAGCAAATTCACCATCAATCTGAAAAAT
TGCCCAACGGCCTACACCAAAGCCAACGTCGAATTTGACGGCACTGCGGCAGGCAACGACAAAAAAATACTGGCTCTGAC
CGCGGGCACCACTGCCGCACCTGCTGCTACCGGGGTTGGGATCCAAATCAGCGATAAAAGCGACACCGTTTTGGCATTAA
AAACTCCTTCTGCCAGCTATGACTTGAAGACCGGTGCGACAGACGTTAACAAACTGGACTTTAGCGCGCGCTATGTTGCC
ACGTCAGCGACAGTGACTTCCGGCGTAGCTAACTCCAGCGCTACTTTCAACGTCAAGTACAACTAA

Upstream 100 bases:

>100_bases
CATCGCTATGGCAACACGAGCGTCGGCTAAAAAAAGGACAACTCAATCAATGAGTTAAATGGACATTGTGCAAGAATGCA
CTCCTCAAGGAATCCTATCT

Downstream 100 bases:

>100_bases
ACGCGAATTCGGCCTCTTTGAGGTTGTTTGACTTTGCAGGGACTGCCCGCCGGGTCGTCCCTTTTCAGGGAGAAACTGGG
CATGAAAGCATTGCAGGTCG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKTLLVTSLATIALFSTASAFAADGNINFTGDIKDATCEVDLAAGATAISVPMGTLNKTAFSGAGSTGTSSKFTINLKN
CPTAYTKANVEFDGTAAGNDKKILALTAGTTAAPAATGVGIQISDKSDTVLALKTPSASYDLKTGATDVNKLDFSARYVA
TSATVTSGVANSSATFNVKYN

Sequences:

>Translated_181_residues
MKKTLLVTSLATIALFSTASAFAADGNINFTGDIKDATCEVDLAAGATAISVPMGTLNKTAFSGAGSTGTSSKFTINLKN
CPTAYTKANVEFDGTAAGNDKKILALTAGTTAAPAATGVGIQISDKSDTVLALKTPSASYDLKTGATDVNKLDFSARYVA
TSATVTSGVANSSATFNVKYN
>Mature_181_residues
MKKTLLVTSLATIALFSTASAFAADGNINFTGDIKDATCEVDLAAGATAISVPMGTLNKTAFSGAGSTGTSSKFTINLKN
CPTAYTKANVEFDGTAAGNDKKILALTAGTTAAPAATGVGIQISDKSDTVLALKTPSASYDLKTGATDVNKLDFSARYVA
TSATVTSGVANSSATFNVKYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081805, Length=181, Percent_Identity=32.0441988950276, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87082421, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1790773, Length=172, Percent_Identity=31.3953488372093, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790769, Length=161, Percent_Identity=37.2670807453416, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI87081753, Length=158, Percent_Identity=33.5443037974684, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18243; Mature: 18243

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLVTSLATIALFSTASAFAADGNINFTGDIKDATCEVDLAAGATAISVPMGTLNKT
CCCEEEEHHHHHHHHHHCCCCEEECCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCE
AFSGAGSTGTSSKFTINLKNCPTAYTKANVEFDGTAAGNDKKILALTAGTTAAPAATGVG
EECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCE
IQISDKSDTVLALKTPSASYDLKTGATDVNKLDFSARYVATSATVTSGVANSSATFNVKY
EEECCCCCEEEEEECCCCCEEECCCCCCCEEECCEEEEEEECCEEECCCCCCCEEEEEEE
N
C
>Mature Secondary Structure
MKKTLLVTSLATIALFSTASAFAADGNINFTGDIKDATCEVDLAAGATAISVPMGTLNKT
CCCEEEEHHHHHHHHHHCCCCEEECCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCE
AFSGAGSTGTSSKFTINLKNCPTAYTKANVEFDGTAAGNDKKILALTAGTTAAPAATGVG
EECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCE
IQISDKSDTVLALKTPSASYDLKTGATDVNKLDFSARYVATSATVTSGVANSSATFNVKY
EEECCCCCEEEEEECCCCCEEECCCCCCCEEECCEEEEEEECCEEECCCCCCCEEEEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721701; 11677609 [H]