| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371063
Identifier: 157371063
GI number: 157371063
Start: 3104179
End: 3105177
Strand: Reverse
Name: 157371063
Synonym: Spro_2823
Alternate gene names: NA
Gene position: 3105177-3104179 (Counterclockwise)
Preceding gene: 157371065
Following gene: 157371062
Centisome position: 56.99
GC content: 56.36
Gene sequence:
>999_bases TTGAAGATAACCAATCGTTACTATGATGCCGGCAAAACGCACCATACCCCGCAGGGGTTTCGTAACCCGGAGCCTTCGCA GCGTCGGGATGGGGATTTGAAACGCTGGCAGAACGAGCGTAAACAGCAGGGGTTGCCCAAACCTCCGCAGATGGGCTATC AGCAGTTTACCCAGCGCTGGTGGCAACGTGCCGACCTTGGCGGCAGCGATAACAGCATTTGGTGGTTGGGGCACGCCTCA ATGCTGCTGCGCCTGGATGGCCGATACATCCTGATCGACCCGGTATTGTCTGAACGTGCATCGCCGCTGAGTTTCTATGG CCCAAAGCGCAAAACACCGCCGCCGTTGACGGTGCAACAGTTGCCGGCAGTGGACGTGGTTTTAATCTCCCACAATCACT ATGACCATCTCGATCGGCGCACCGTGCGGCAGTTGGCACGGCGTTTTCCGCACGCGACCTTTATTGTGCCCTTGGGGCTG AAAAACTGGTTCCGACGTTACCGGCTGCAACGGGTAGAAGAGCTGGACTGGTGGGATAGCCTGCAGTTGGGCGATTTGAC TTTCTATTGCACGCCGGCGCGTCACTGGAGCATGCGTACCCTGTGGGACCGCAATCGCTCTCTCTGGTGCGGTTGGGTGA TTCATCATCCGGCGCTGCGTTTCTATTTTTCCGGAGACAGCGGTTATTCGGATCGCCTGGCAGATATTGGCACCCGTTTA GGGCCGTTTGACGTGGCGGCATTACCGATTGGCGCCTACGCACCACGTTGGTTCATGCAGGAACAACATATGGATCCGCA GCAGTCGGTGACGCTGTATCAACAATTAAATGCGCCGCGGGTCATTCCGATCCATTGGGGCGTTTTTGAGTTGGCCGATG AGTCGTTGGATGAACCGCCGCAGCAATTAAATCTGGCTCTGAGTGCGGCGGGAATAGAGCAGCACCAGTTTCGGCCCATC AAAATTGGCGAGCGCATTGCGCTTGATGCTAACTCTTAA
Upstream 100 bases:
>100_bases TCACTCAAGGTGAGCACGGTTCACAAAGCACGCCGATCGAGTATCTTGTTATGTTATTCACCTGCCCGTGTTGGGTGTCC GCAGTGGTCGGGAGAGCAAT
Downstream 100 bases:
>100_bases GCGTTATTCCTGGTCCTGTGTGGCGGGGGCTGTTGTCGTCACCGTCTGCAGGCCAGTCCCAATGCGGGTTGTAGCCATTC GGTGGTGCAGGGCCTGGCTT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKITNRYYDAGKTHHTPQGFRNPEPSQRRDGDLKRWQNERKQQGLPKPPQMGYQQFTQRWWQRADLGGSDNSIWWLGHAS MLLRLDGRYILIDPVLSERASPLSFYGPKRKTPPPLTVQQLPAVDVVLISHNHYDHLDRRTVRQLARRFPHATFIVPLGL KNWFRRYRLQRVEELDWWDSLQLGDLTFYCTPARHWSMRTLWDRNRSLWCGWVIHHPALRFYFSGDSGYSDRLADIGTRL GPFDVAALPIGAYAPRWFMQEQHMDPQQSVTLYQQLNAPRVIPIHWGVFELADESLDEPPQQLNLALSAAGIEQHQFRPI KIGERIALDANS
Sequences:
>Translated_332_residues MKITNRYYDAGKTHHTPQGFRNPEPSQRRDGDLKRWQNERKQQGLPKPPQMGYQQFTQRWWQRADLGGSDNSIWWLGHAS MLLRLDGRYILIDPVLSERASPLSFYGPKRKTPPPLTVQQLPAVDVVLISHNHYDHLDRRTVRQLARRFPHATFIVPLGL KNWFRRYRLQRVEELDWWDSLQLGDLTFYCTPARHWSMRTLWDRNRSLWCGWVIHHPALRFYFSGDSGYSDRLADIGTRL GPFDVAALPIGAYAPRWFMQEQHMDPQQSVTLYQQLNAPRVIPIHWGVFELADESLDEPPQQLNLALSAAGIEQHQFRPI KIGERIALDANS >Mature_332_residues MKITNRYYDAGKTHHTPQGFRNPEPSQRRDGDLKRWQNERKQQGLPKPPQMGYQQFTQRWWQRADLGGSDNSIWWLGHAS MLLRLDGRYILIDPVLSERASPLSFYGPKRKTPPPLTVQQLPAVDVVLISHNHYDHLDRRTVRQLARRFPHATFIVPLGL KNWFRRYRLQRVEELDWWDSLQLGDLTFYCTPARHWSMRTLWDRNRSLWCGWVIHHPALRFYFSGDSGYSDRLADIGTRL GPFDVAALPIGAYAPRWFMQEQHMDPQQSVTLYQQLNAPRVIPIHWGVFELADESLDEPPQQLNLALSAAGIEQHQFRPI KIGERIALDANS
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=263, Percent_Identity=44.8669201520913, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI170932481, Length=263, Percent_Identity=44.8669201520913, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17543102, Length=268, Percent_Identity=40.2985074626866, Blast_Score=216, Evalue=9e-57, Organism=Caenorhabditis elegans, GI17543100, Length=262, Percent_Identity=40.4580152671756, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI25148824, Length=268, Percent_Identity=40.2985074626866, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17543104, Length=262, Percent_Identity=40.0763358778626, Blast_Score=207, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6325154, Length=262, Percent_Identity=33.587786259542, Blast_Score=152, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38879; Mature: 38879
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITNRYYDAGKTHHTPQGFRNPEPSQRRDGDLKRWQNERKQQGLPKPPQMGYQQFTQRW CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WQRADLGGSDNSIWWLGHASMLLRLDGRYILIDPVLSERASPLSFYGPKRKTPPPLTVQQ HHHHCCCCCCCCEEEEECCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHH LPAVDVVLISHNHYDHLDRRTVRQLARRFPHATFIVPLGLKNWFRRYRLQRVEELDWWDS CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC LQLGDLTFYCTPARHWSMRTLWDRNRSLWCGWVIHHPALRFYFSGDSGYSDRLADIGTRL CEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHCCC GPFDVAALPIGAYAPRWFMQEQHMDPQQSVTLYQQLNAPRVIPIHWGVFELADESLDEPP CCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCH QQLNLALSAAGIEQHQFRPIKIGERIALDANS HHHEEEHEECCCHHHCCCCEECCCEEEEECCC >Mature Secondary Structure MKITNRYYDAGKTHHTPQGFRNPEPSQRRDGDLKRWQNERKQQGLPKPPQMGYQQFTQRW CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WQRADLGGSDNSIWWLGHASMLLRLDGRYILIDPVLSERASPLSFYGPKRKTPPPLTVQQ HHHHCCCCCCCCEEEEECCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHH LPAVDVVLISHNHYDHLDRRTVRQLARRFPHATFIVPLGLKNWFRRYRLQRVEELDWWDS CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC LQLGDLTFYCTPARHWSMRTLWDRNRSLWCGWVIHHPALRFYFSGDSGYSDRLADIGTRL CEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHCCC GPFDVAALPIGAYAPRWFMQEQHMDPQQSVTLYQQLNAPRVIPIHWGVFELADESLDEPP CCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCH QQLNLALSAAGIEQHQFRPIKIGERIALDANS HHHEEEHEECCCHHHCCCCEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]