| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yebN [C]
Identifier: 157371057
GI number: 157371057
Start: 3098318
End: 3098887
Strand: Direct
Name: yebN [C]
Synonym: Spro_2817
Alternate gene names: 157371057
Gene position: 3098318-3098887 (Clockwise)
Preceding gene: 157371056
Following gene: 157371059
Centisome position: 56.86
GC content: 56.84
Gene sequence:
>570_bases ATGAACTTGTCAGCTACACTCATTCTCGCTTTTGGCATGTCTATGGATGCGTTCGCCGCATCAATTGGCAAAGGTGCCAG CCTGCATCAACCCCGTTTTCGTGAAGCACTACGCACCGGACTTATCTTCGGCGTGGTAGAAGCCATTACGCCGATTATCG GTTGGGGCATCGGCTTATTCGCCAGCCAATACATTATGGAGTGGGATCACTGGGTCGCCTTCTCGCTGCTGTTTATCCTC GGCATGCGCATGATCGTCGAAGGCGTCAGGAACCGGCCTGACGAAGTGGAAAAAGTGAAGCGTCACGGCTTCTGGTTATT GGTCGCTACCGCCATCGCTACCAGCCTCGACGCCATGGCTATCGGTGTCGGCCTGGCCTTCCTGCAGGTGAACATCGTAC ACACCGCCATGGCCATCGGCTGCGCCACCATGATTATGGCCACCCTGGGCATGATGATAGGCCGCTTTATCGGGCCGTTG CTCGGCAAACGCGCGGAGATCCTCGGCGGCGTGGTGCTGATCGGTATCGGTGTGAACATCCTGCTGGAGCATTTGGGCTA TCTGGCCTGA
Upstream 100 bases:
>100_bases GCAGCCAGGTAAGGTTGGCGAGACCATAGACACGTAACTCCGTCGTATGGTTGGGGGTGGGTTACGTGTATATGGAGCCG CCCGGCCGAGGTTATTTTTC
Downstream 100 bases:
>100_bases TAGCGCTGAACCCAAAGAAAACCTGCCCAACGGCAGGTTTTTTTGTTTGTGGCCCGTCACTCTCTTTGCTCATTCCTCAC CGACGCACCTGGACGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNLSATLILAFGMSMDAFAASIGKGASLHQPRFREALRTGLIFGVVEAITPIIGWGIGLFASQYIMEWDHWVAFSLLFIL GMRMIVEGVRNRPDEVEKVKRHGFWLLVATAIATSLDAMAIGVGLAFLQVNIVHTAMAIGCATMIMATLGMMIGRFIGPL LGKRAEILGGVVLIGIGVNILLEHLGYLA
Sequences:
>Translated_189_residues MNLSATLILAFGMSMDAFAASIGKGASLHQPRFREALRTGLIFGVVEAITPIIGWGIGLFASQYIMEWDHWVAFSLLFIL GMRMIVEGVRNRPDEVEKVKRHGFWLLVATAIATSLDAMAIGVGLAFLQVNIVHTAMAIGCATMIMATLGMMIGRFIGPL LGKRAEILGGVVLIGIGVNILLEHLGYLA >Mature_189_residues MNLSATLILAFGMSMDAFAASIGKGASLHQPRFREALRTGLIFGVVEAITPIIGWGIGLFASQYIMEWDHWVAFSLLFIL GMRMIVEGVRNRPDEVEKVKRHGFWLLVATAIATSLDAMAIGVGLAFLQVNIVHTAMAIGCATMIMATLGMMIGRFIGPL LGKRAEILGGVVLIGIGVNILLEHLGYLA
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family
Homologues:
Organism=Escherichia coli, GI87081981, Length=186, Percent_Identity=72.0430107526882, Blast_Score=276, Evalue=8e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2817_SERP5 (A8GFM8)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001479046.1 - STRING: A8GFM8 - GeneID: 5602622 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_2817 - eggNOG: COG1971 - HOGENOM: HBG709685 - OMA: WDHWVAF - ProtClustDB: CLSK888955 - BioCyc: SPRO399741:SPRO_2817-MONOMER - HAMAP: MF_01521 - InterPro: IPR003810 - InterPro: IPR022929
Pfam domain/function: PF02659 DUF204
EC number: NA
Molecular weight: Translated: 20340; Mature: 20340
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x24cf90bc)-; HASH(0x25635170)-; HASH(0x26248998)-; HASH(0x2655da1c)-; HASH(0x220f0cd0)-; HASH(0x265d0cfc)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSATLILAFGMSMDAFAASIGKGASLHQPRFREALRTGLIFGVVEAITPIIGWGIGLF CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQYIMEWDHWVAFSLLFILGMRMIVEGVRNRPDEVEKVKRHGFWLLVATAIATSLDAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH IGVGLAFLQVNIVHTAMAIGCATMIMATLGMMIGRFIGPLLGKRAEILGGVVLIGIGVNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLEHLGYLA HHHHHHCCH >Mature Secondary Structure MNLSATLILAFGMSMDAFAASIGKGASLHQPRFREALRTGLIFGVVEAITPIIGWGIGLF CCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQYIMEWDHWVAFSLLFILGMRMIVEGVRNRPDEVEKVKRHGFWLLVATAIATSLDAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH IGVGLAFLQVNIVHTAMAIGCATMIMATLGMMIGRFIGPLLGKRAEILGGVVLIGIGVNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLEHLGYLA HHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA