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The map label for this gene is ydfF [H]

Identifier: 157371059

GI number: 157371059

Start: 3100465

End: 3101202

Strand: Direct

Name: ydfF [H]

Synonym: Spro_2819

Alternate gene names: 157371059

Gene position: 3100465-3101202 (Clockwise)

Preceding gene: 157371057

Following gene: 157371061

Centisome position: 56.9

GC content: 61.79

Gene sequence:

>738_bases
GTGGGCCAACACAATATTGCCACCGTGGCACATCTGATTGCCGAACCGGTGCGGGCGGTGATGCTGATCGCACTGGCCGA
CGGCAATGCCCTGTCCGCCAGTGCCCTGGCAGAGACCGCAGGCGTCACCCCGCAAACTGCCAGTTCACATCTGGGCAAGC
TGCTGGATGGCGGGTTGCTGAACGTCGAACAGAGGGGCCGCTACCGCTATTATCGCCTTGCCGGGCCTCATGTTTCACAT
CTGCTGGAAAGTCTGGCATCGATAGGGCCGGTTACACCTGCCTGGCGCAGCACGCCCAATCGCTCGGCACGGGAGATGCG
CTTTGCGCGCTGCTGTTACGATCATTTAGCCGGAAAGGTCGGCGTAGCGATAACGCGCCGCCTGCTGGAACAGGAGTTGA
TGGTCGAAAACGACCTGCAAGAATATTCACTGACGCCCGCAGGGGCCGACTGGCTGCAGGAGCTAGGGGCTGAGGCCGCC
GCGTTGTCGTCCGGTGAAGTGGGTAAAGGACGCCAATGCCTGGACTGGACCGAGAGACAATATCATCTTGCAGGGCCGCT
GGCGGCTCACCTGCTCAATGCTTTCTGTCTGTGGGGTTGGCTGCAACGGCTGCCGTCCTCCCGAGCGCTCGCGGTGACGC
CAAAGGGCTGGGTGGCGTTGAAAACGCATTTCGCCCTCACCCCTGACAGCCTGGAAGACGAGCGGACCAATGACCCGGCC
GTCTGTCCACCAGTTTAA

Upstream 100 bases:

>100_bases
CGTTGACTATAAACAACGATTAGCCTGGAATAGTTCGAGCTGTATCGAAGTGTGCCTTAAGCGCTTAAAATATCACCGAC
CATCCTGGGAGGATAACGTC

Downstream 100 bases:

>100_bases
TCGGGCTGGCGGCGGTACAACGCGATAACAAAATCGGTTTCGCAGGCGAAGGCCTCACAGCCACTCAGGTGCTGCTGAAC
CTCAGGCGAGGCGCGCCAGG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGQHNIATVAHLIAEPVRAVMLIALADGNALSASALAETAGVTPQTASSHLGKLLDGGLLNVEQRGRYRYYRLAGPHVSH
LLESLASIGPVTPAWRSTPNRSAREMRFARCCYDHLAGKVGVAITRRLLEQELMVENDLQEYSLTPAGADWLQELGAEAA
ALSSGEVGKGRQCLDWTERQYHLAGPLAAHLLNAFCLWGWLQRLPSSRALAVTPKGWVALKTHFALTPDSLEDERTNDPA
VCPPV

Sequences:

>Translated_245_residues
MGQHNIATVAHLIAEPVRAVMLIALADGNALSASALAETAGVTPQTASSHLGKLLDGGLLNVEQRGRYRYYRLAGPHVSH
LLESLASIGPVTPAWRSTPNRSAREMRFARCCYDHLAGKVGVAITRRLLEQELMVENDLQEYSLTPAGADWLQELGAEAA
ALSSGEVGKGRQCLDWTERQYHLAGPLAAHLLNAFCLWGWLQRLPSSRALAVTPKGWVALKTHFALTPDSLEDERTNDPA
VCPPV
>Mature_244_residues
GQHNIATVAHLIAEPVRAVMLIALADGNALSASALAETAGVTPQTASSHLGKLLDGGLLNVEQRGRYRYYRLAGPHVSHL
LESLASIGPVTPAWRSTPNRSAREMRFARCCYDHLAGKVGVAITRRLLEQELMVENDLQEYSLTPAGADWLQELGAEAAA
LSSGEVGKGRQCLDWTERQYHLAGPLAAHLLNAFCLWGWLQRLPSSRALAVTPKGWVALKTHFALTPDSLEDERTNDPAV
CPPV

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 26546; Mature: 26414

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQHNIATVAHLIAEPVRAVMLIALADGNALSASALAETAGVTPQTASSHLGKLLDGGLL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
NVEQRGRYRYYRLAGPHVSHLLESLASIGPVTPAWRSTPNRSAREMRFARCCYDHLAGKV
CHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVAITRRLLEQELMVENDLQEYSLTPAGADWLQELGAEAAALSSGEVGKGRQCLDWTERQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHH
YHLAGPLAAHLLNAFCLWGWLQRLPSSRALAVTPKGWVALKTHFALTPDSLEDERTNDPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC
VCPPV
CCCCC
>Mature Secondary Structure 
GQHNIATVAHLIAEPVRAVMLIALADGNALSASALAETAGVTPQTASSHLGKLLDGGLL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
NVEQRGRYRYYRLAGPHVSHLLESLASIGPVTPAWRSTPNRSAREMRFARCCYDHLAGKV
CHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVAITRRLLEQELMVENDLQEYSLTPAGADWLQELGAEAAALSSGEVGKGRQCLDWTERQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHH
YHLAGPLAAHLLNAFCLWGWLQRLPSSRALAVTPKGWVALKTHFALTPDSLEDERTNDPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC
VCPPV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]