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The map label for this gene is ydjA [H]

Identifier: 157370961

GI number: 157370961

Start: 2997683

End: 2998234

Strand: Reverse

Name: ydjA [H]

Synonym: Spro_2721

Alternate gene names: 157370961

Gene position: 2998234-2997683 (Counterclockwise)

Preceding gene: 157370966

Following gene: 157370960

Centisome position: 55.03

GC content: 57.79

Gene sequence:

>552_bases
ATGGATGCACTGGATCTTTTACTGAATCGCCGCTCTGCGTCACGCCTCGCGGCCCCGGCGCCGACGGGTGAGGCACGCCA
GAATATCATCAACGCTGGCCTGCGAGCGCCCGATCATGGTGCCTTGCAGCCATGGCGTTTTGTGATGATCGAAAACCAGG
GTCTGGAGCGTTTTAGCCAATTGTTACAAGCTGCTGCAAAGCAGGACGAAATGGATGAAGCCGCGCTAGAAAAGGCCACA
AAAGCGCCATTCCGCGCCCCGCTGATTATCACCGTGGTGGCCCATTGCACTGAAGAAACCAAGGTGCCGCGCTGGGAACA
GGTGGTTTCTGCCGGTTGTGCGGTTCAGGCGATGCAGATGGCCGCACTGGCGCAGGGTTTCAACGGTATCTGGCGCACCG
GCGCCTGGACCGAACATTCACTGGTTCGCGAAGCCTTTGGCTGTCGCGAGCAGGACGAAATTGTCGGCTTCCTGTATTTG
GGGACTCCACAGTTAAAAGCTTCCACCAAAGTGATCGCCCCGGACAGCACGCCTTTCGTCAGCTATTTCTGA

Upstream 100 bases:

>100_bases
AGCTTTAAATCGTGGGTCACAGAGGCTAATGCCGAGGCTGTCACTCGCCGTTTAGCTATGTTAACGTGATTTGAATGAAA
ATTGTTATCAGGAGTTTACG

Downstream 100 bases:

>100_bases
TCCCACTGGCGGGATTGCGGCAAAAATGCGCTAAATCCCGCCATTCTGTGTTGTTTATGAGCAGGCCGTTCGGTTATCGG
CAGCCCGCTCTTACCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDALDLLLNRRSASRLAAPAPTGEARQNIINAGLRAPDHGALQPWRFVMIENQGLERFSQLLQAAAKQDEMDEAALEKAT
KAPFRAPLIITVVAHCTEETKVPRWEQVVSAGCAVQAMQMAALAQGFNGIWRTGAWTEHSLVREAFGCREQDEIVGFLYL
GTPQLKASTKVIAPDSTPFVSYF

Sequences:

>Translated_183_residues
MDALDLLLNRRSASRLAAPAPTGEARQNIINAGLRAPDHGALQPWRFVMIENQGLERFSQLLQAAAKQDEMDEAALEKAT
KAPFRAPLIITVVAHCTEETKVPRWEQVVSAGCAVQAMQMAALAQGFNGIWRTGAWTEHSLVREAFGCREQDEIVGFLYL
GTPQLKASTKVIAPDSTPFVSYF
>Mature_183_residues
MDALDLLLNRRSASRLAAPAPTGEARQNIINAGLRAPDHGALQPWRFVMIENQGLERFSQLLQAAAKQDEMDEAALEKAT
KAPFRAPLIITVVAHCTEETKVPRWEQVVSAGCAVQAMQMAALAQGFNGIWRTGAWTEHSLVREAFGCREQDEIVGFLYL
GTPQLKASTKVIAPDSTPFVSYF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=70.4918032786885, Blast_Score=271, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20095; Mature: 20095

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALDLLLNRRSASRLAAPAPTGEARQNIINAGLRAPDHGALQPWRFVMIENQGLERFSQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH
LLQAAAKQDEMDEAALEKATKAPFRAPLIITVVAHCTEETKVPRWEQVVSAGCAVQAMQM
HHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AALAQGFNGIWRTGAWTEHSLVREAFGCREQDEIVGFLYLGTPQLKASTKVIAPDSTPFV
HHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCEEECCCCCCCC
SYF
CCC
>Mature Secondary Structure
MDALDLLLNRRSASRLAAPAPTGEARQNIINAGLRAPDHGALQPWRFVMIENQGLERFSQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH
LLQAAAKQDEMDEAALEKATKAPFRAPLIITVVAHCTEETKVPRWEQVVSAGCAVQAMQM
HHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AALAQGFNGIWRTGAWTEHSLVREAFGCREQDEIVGFLYLGTPQLKASTKVIAPDSTPFV
HHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCEEECCCCCCCC
SYF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]