Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 157370960

GI number: 157370960

Start: 2996482

End: 2997525

Strand: Reverse

Name: selD [H]

Synonym: Spro_2720

Alternate gene names: 157370960

Gene position: 2997525-2996482 (Counterclockwise)

Preceding gene: 157370961

Following gene: 157370959

Centisome position: 55.01

GC content: 58.52

Gene sequence:

>1044_bases
ATGACATCGCCAGCGATCCGTTTAACCCAGTACAGCCATGGCGCCGGCTGCGGTTGTAAAATCTCACCGAAAGTTCTCGA
AACTATTCTGCACAGCGAGCGGGAGAAATTTGTCGATCCGCGCTTGCTGGTGGGTAATGAAACCCGTGACGATGCGGCAG
TGTATGACATCGGCAACGGCGTGGGCATTATCAGCACCACCGACTTCTTTATGCCGATCGTCGATAACCCGTTCGATTTC
GGTCGCATCGCCGCCACCAACGCCATCAGCGACGTGTATGCCATGGGCGGTAAACCGATCATGGCGATTGCCATTCTGGG
CTGGCCGATTGCTACGCTGCCGGCAGAAGTGGCGCAGCAGGTGATCGACGGCGGGCGCTATGCCTGTCAGCAGGCGGGTA
TCGCCCTGGCGGGCGGCCATTCTATCGATGCGCCAGAGCCTATTTTTGGCCTGGCGGTGACCGGCATCGTCAATACCGAG
CGGGTAAAGAAAAACAGCGCGGCGCAGGCCGGAGCCAAATTGTACCTGACCAAGCCGTTGGGCATTGGCGTGCTGACTAC
CGCCGAGAAGAAAAGCAAACTGTTGCCAGAGCATGAAGGCCTGGCAACCGAAGTGATGTGCCAATTGAATAAACCGGGCA
CGGATTTTGCTGAAGTCGAAGGTGTGACGGCGATGACCGACGTTACCGGCTTTGGTCTGCTGGGGCATCTGAGCGAGGTT
TGCCAGGGTTCAGGGTTGCAGGCGACGGTCTGGTTTGATCAGGTACCTAAATTGCCGGACATCGAGCGTTATATTGCCGC
GGGCTGCGTGCCGGGTGGCACCGGGCGCAATTTTGAAAGTTACGGCCATCTGGTCGGTGAAATGACCGACCTGCAGCGCC
AATTGCTGTGCGATCCGCAGACCTCCGGCGGCTTGCTGCTGGCGGTACTACCTGAAGCGGAGCAGCAGGTGCAGGCGATT
GCCGAGCGCCACGGCATTCAACTCCAGGCTATCGGTGAACTGCATGCGGCAGTGCCGGGCAAGCCGTTGATTGAGGTTGT
CTAG

Upstream 100 bases:

>100_bases
TGAGCAGGCCGTTCGGTTATCGGCAGCCCGCTCTTACCAATCCCGTCGGCAAGCGCTACCCTATGATATCTTGAATGCCG
TTAACCGAAGGGAGTGGTAT

Downstream 100 bases:

>100_bases
TGTCAGCCACCAGGGAACGGGAAGACGGCCAGGATTATCGCCGTATTTTTTTGCAGGATATCCCGCTGATTGACGTGCGT
GCGCCGGTTGAGTTTCAGCA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTSPAIRLTQYSHGAGCGCKISPKVLETILHSEREKFVDPRLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDNPFDF
GRIAATNAISDVYAMGGKPIMAIAILGWPIATLPAEVAQQVIDGGRYACQQAGIALAGGHSIDAPEPIFGLAVTGIVNTE
RVKKNSAAQAGAKLYLTKPLGIGVLTTAEKKSKLLPEHEGLATEVMCQLNKPGTDFAEVEGVTAMTDVTGFGLLGHLSEV
CQGSGLQATVWFDQVPKLPDIERYIAAGCVPGGTGRNFESYGHLVGEMTDLQRQLLCDPQTSGGLLLAVLPEAEQQVQAI
AERHGIQLQAIGELHAAVPGKPLIEVV

Sequences:

>Translated_347_residues
MTSPAIRLTQYSHGAGCGCKISPKVLETILHSEREKFVDPRLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDNPFDF
GRIAATNAISDVYAMGGKPIMAIAILGWPIATLPAEVAQQVIDGGRYACQQAGIALAGGHSIDAPEPIFGLAVTGIVNTE
RVKKNSAAQAGAKLYLTKPLGIGVLTTAEKKSKLLPEHEGLATEVMCQLNKPGTDFAEVEGVTAMTDVTGFGLLGHLSEV
CQGSGLQATVWFDQVPKLPDIERYIAAGCVPGGTGRNFESYGHLVGEMTDLQRQLLCDPQTSGGLLLAVLPEAEQQVQAI
AERHGIQLQAIGELHAAVPGKPLIEVV
>Mature_346_residues
TSPAIRLTQYSHGAGCGCKISPKVLETILHSEREKFVDPRLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDNPFDFG
RIAATNAISDVYAMGGKPIMAIAILGWPIATLPAEVAQQVIDGGRYACQQAGIALAGGHSIDAPEPIFGLAVTGIVNTER
VKKNSAAQAGAKLYLTKPLGIGVLTTAEKKSKLLPEHEGLATEVMCQLNKPGTDFAEVEGVTAMTDVTGFGLLGHLSEVC
QGSGLQATVWFDQVPKLPDIERYIAAGCVPGGTGRNFESYGHLVGEMTDLQRQLLCDPQTSGGLLLAVLPEAEQQVQAIA
ERHGIQLQAIGELHAAVPGKPLIEVV

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=362, Percent_Identity=29.8342541436464, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI15011844, Length=381, Percent_Identity=28.0839895013123, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1788062, Length=346, Percent_Identity=76.5895953757225, Blast_Score=548, Evalue=1e-157,
Organism=Caenorhabditis elegans, GI17543426, Length=358, Percent_Identity=28.2122905027933, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28574119, Length=339, Percent_Identity=30.0884955752212, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24653602, Length=363, Percent_Identity=27.8236914600551, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24653604, Length=363, Percent_Identity=27.8236914600551, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28574118, Length=266, Percent_Identity=31.203007518797, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36606; Mature: 36475

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPAIRLTQYSHGAGCGCKISPKVLETILHSEREKFVDPRLLVGNETRDDAAVYDIGNG
CCCCCEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCC
VGIISTTDFFMPIVDNPFDFGRIAATNAISDVYAMGGKPIMAIAILGWPIATLPAEVAQQ
EEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VIDGGRYACQQAGIALAGGHSIDAPEPIFGLAVTGIVNTERVKKNSAAQAGAKLYLTKPL
HHCCCHHHHHHCCEEEECCCCCCCCCCHHHEEEECCCCHHHHHHCHHHHCCCEEEEECCC
GIGVLTTAEKKSKLLPEHEGLATEVMCQLNKPGTDFAEVEGVTAMTDVTGFGLLGHLSEV
CCEEEEECHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHH
CQGSGLQATVWFDQVPKLPDIERYIAAGCVPGGTGRNFESYGHLVGEMTDLQRQLLCDPQ
HCCCCCEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TSGGLLLAVLPEAEQQVQAIAERHGIQLQAIGELHAAVPGKPLIEVV
CCCCEEEEECCCHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCEEEC
>Mature Secondary Structure 
TSPAIRLTQYSHGAGCGCKISPKVLETILHSEREKFVDPRLLVGNETRDDAAVYDIGNG
CCCCEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCC
VGIISTTDFFMPIVDNPFDFGRIAATNAISDVYAMGGKPIMAIAILGWPIATLPAEVAQQ
EEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VIDGGRYACQQAGIALAGGHSIDAPEPIFGLAVTGIVNTERVKKNSAAQAGAKLYLTKPL
HHCCCHHHHHHCCEEEECCCCCCCCCCHHHEEEECCCCHHHHHHCHHHHCCCEEEEECCC
GIGVLTTAEKKSKLLPEHEGLATEVMCQLNKPGTDFAEVEGVTAMTDVTGFGLLGHLSEV
CCEEEEECHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHH
CQGSGLQATVWFDQVPKLPDIERYIAAGCVPGGTGRNFESYGHLVGEMTDLQRQLLCDPQ
HCCCCCEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TSGGLLLAVLPEAEQQVQAIAERHGIQLQAIGELHAAVPGKPLIEVV
CCCCEEEEECCCHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]