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The map label for this gene is ygaF [C]

Identifier: 157370936

GI number: 157370936

Start: 2967694

End: 2969091

Strand: Reverse

Name: ygaF [C]

Synonym: Spro_2696

Alternate gene names: 157370936

Gene position: 2969091-2967694 (Counterclockwise)

Preceding gene: 157370937

Following gene: 157370935

Centisome position: 54.49

GC content: 55.15

Gene sequence:

>1398_bases
ATGACACAGCTGAATGAAAATGTTGATGTGGTAGTTATTGGTGGTGGCGTGGTGGGATGTGCCGTTTTCCGGCGTTTCAC
CCTTATGGGGGCGAAAACGCTATTGCTGGAGCGGGGCGGTGATATCTTGTCGGGCGCCAGCAAGGCTAACAGCGCCATTT
TGCATACGGGCTTCGATGCACCTACAGGAAGCCTGGAATTACAATGCATGCAGGCCGGCTACGAAGAATATTTGGCGATC
AGGGAAAAGATGAATCTCCCGCTGTTGCAGACCACGGCTATTGTGGTGGCCTGGAATGAAGAACAGCTTGCCGCTCTCCC
TGGCATTGTGAAGCAAGCGCATGAAAATGGGGTGACTGACGTGGAGCAAATTTCAGCCGCTGATGTTTACCTGCGCGAGC
CAAAATTGGCCGAGGGGGTGCTGGGGGGCGTATTTGTCCCCGGCGAATATGTCATCGACCCCTGGAGCGCGCCGCTCGCT
TATGTCACGCAGGGCGTGATACATGGCGGAGAATACCGTTTCAATTGCGAAGTGACCAATGCGACGCAAGATGAGCAAGG
CTGGTTATTAACCACCCGTCAGGGCAGTGTGAGAACCAGGCTTGTGATTAACTGTGCAGGCAACCATGGCGATTTGATCG
ATGGCCTGTGGCGTACGCCGGACTATGAGATCCGCCCACGCAAAGGGCAGTTTCTGGTCTATGACAAAGCGGCGGCCGCA
GATATCAATGCCATTATCTTGCCGGTACCGACGGCCACCACCAAAGGCGTTCTGCTGTGTCGGACCATCTTCGGTAATAT
GATTTTGGGTCCAACGGCCGAGGAACAAACCGATCGTGACCGTGCGGATGTGGATGAGGCGGTGCTTAAAGGGCTGATTG
AAAAAGGCAGCCAAATGCTGCCGACGTTGGGCCAATATACCGTTACCGCCACCTATGCTGGCCTTCGCCCAGCAACGGAA
AAGAAAGAGTATCGAATTTATCATTACCCTCAGGATAATTGGGTCAGCGTAGGTGGCATTCGGTCCACCGGGCTGACTGC
CGCGTTGGGCATTGCCGCCCATGTGGAAGATCTTTACCGCAACCATTTCAGCGAGCTGTTTTCAACCCAACCGCCAGCCG
AGGTGCAGTGGCCGGTGATGCCGATGTTGTCTGACTACCAACCGCGCGATTATGCCTGTTCGGGCAATGGCGGCATCATT
TGTCATTGCGAATTGGTTACGCGACGCGAGCTGGAGGCGGCCTTCCACTCGGCGGTACCGCCTGAATGTATCGGGGGTCT
GCGTCGCCGCACACGCGTCATGATGGGACGTTGTAACGGTTTTTTCTGTAGTAACCAGGTTGCTGAAATTGCGGGCGACC
GTCTGGATAATACGCTGGTCGTCGGGAGGGTAGAATGA

Upstream 100 bases:

>100_bases
TTCTGGGTTTTTCTCTAGTGTTGATTTGTGTGGTTTTAGTGTTGTAATTGCCGTGCTTGTGTGGTTTTATTGTCACATGT
TTCGTGGTGAGATAACGCGT

Downstream 100 bases:

>100_bases
GTCGATTATACGACGTCATTATTATTGGCGCTGGGCCTGCCGGTTTGGCCGCCGCCCGGACTTTATGGGACGAGGGAGTA
AACCGCGTTCTGTTGTTGGA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTQLNENVDVVVIGGGVVGCAVFRRFTLMGAKTLLLERGGDILSGASKANSAILHTGFDAPTGSLELQCMQAGYEEYLAI
REKMNLPLLQTTAIVVAWNEEQLAALPGIVKQAHENGVTDVEQISAADVYLREPKLAEGVLGGVFVPGEYVIDPWSAPLA
YVTQGVIHGGEYRFNCEVTNATQDEQGWLLTTRQGSVRTRLVINCAGNHGDLIDGLWRTPDYEIRPRKGQFLVYDKAAAA
DINAIILPVPTATTKGVLLCRTIFGNMILGPTAEEQTDRDRADVDEAVLKGLIEKGSQMLPTLGQYTVTATYAGLRPATE
KKEYRIYHYPQDNWVSVGGIRSTGLTAALGIAAHVEDLYRNHFSELFSTQPPAEVQWPVMPMLSDYQPRDYACSGNGGII
CHCELVTRRELEAAFHSAVPPECIGGLRRRTRVMMGRCNGFFCSNQVAEIAGDRLDNTLVVGRVE

Sequences:

>Translated_465_residues
MTQLNENVDVVVIGGGVVGCAVFRRFTLMGAKTLLLERGGDILSGASKANSAILHTGFDAPTGSLELQCMQAGYEEYLAI
REKMNLPLLQTTAIVVAWNEEQLAALPGIVKQAHENGVTDVEQISAADVYLREPKLAEGVLGGVFVPGEYVIDPWSAPLA
YVTQGVIHGGEYRFNCEVTNATQDEQGWLLTTRQGSVRTRLVINCAGNHGDLIDGLWRTPDYEIRPRKGQFLVYDKAAAA
DINAIILPVPTATTKGVLLCRTIFGNMILGPTAEEQTDRDRADVDEAVLKGLIEKGSQMLPTLGQYTVTATYAGLRPATE
KKEYRIYHYPQDNWVSVGGIRSTGLTAALGIAAHVEDLYRNHFSELFSTQPPAEVQWPVMPMLSDYQPRDYACSGNGGII
CHCELVTRRELEAAFHSAVPPECIGGLRRRTRVMMGRCNGFFCSNQVAEIAGDRLDNTLVVGRVE
>Mature_464_residues
TQLNENVDVVVIGGGVVGCAVFRRFTLMGAKTLLLERGGDILSGASKANSAILHTGFDAPTGSLELQCMQAGYEEYLAIR
EKMNLPLLQTTAIVVAWNEEQLAALPGIVKQAHENGVTDVEQISAADVYLREPKLAEGVLGGVFVPGEYVIDPWSAPLAY
VTQGVIHGGEYRFNCEVTNATQDEQGWLLTTRQGSVRTRLVINCAGNHGDLIDGLWRTPDYEIRPRKGQFLVYDKAAAAD
INAIILPVPTATTKGVLLCRTIFGNMILGPTAEEQTDRDRADVDEAVLKGLIEKGSQMLPTLGQYTVTATYAGLRPATEK
KEYRIYHYPQDNWVSVGGIRSTGLTAALGIAAHVEDLYRNHFSELFSTQPPAEVQWPVMPMLSDYQPRDYACSGNGGIIC
HCELVTRRELEAAFHSAVPPECIGGLRRRTRVMMGRCNGFFCSNQVAEIAGDRLDNTLVVGRVE

Specific function: Unknown

COG id: COG0579

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082148, Length=249, Percent_Identity=26.9076305220884, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788574, Length=482, Percent_Identity=22.6141078838174, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565764, Length=281, Percent_Identity=25.9786476868327, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24585081, Length=253, Percent_Identity=25.6916996047431, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 50761; Mature: 50629

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLNENVDVVVIGGGVVGCAVFRRFTLMGAKTLLLERGGDILSGASKANSAILHTGFDA
CCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCCCCCEEEECCCCC
PTGSLELQCMQAGYEEYLAIREKMNLPLLQTTAIVVAWNEEQLAALPGIVKQAHENGVTD
CCCCEEEHHHHCCHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC
VEQISAADVYLREPKLAEGVLGGVFVPGEYVIDPWSAPLAYVTQGVIHGGEYRFNCEVTN
HHHHCCCCEEECCCCHHHHCCCCEECCCCEEECCCCCCHHHHHHHHEECCEEEEEEEECC
ATQDEQGWLLTTRQGSVRTRLVINCAGNHGDLIDGLWRTPDYEIRPRKGQFLVYDKAAAA
CCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCC
DINAIILPVPTATTKGVLLCRTIFGNMILGPTAEEQTDRDRADVDEAVLKGLIEKGSQML
CCCEEEEECCCCCCCHHHHHHHHHCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCHHC
PTLGQYTVTATYAGLRPATEKKEYRIYHYPQDNWVSVGGIRSTGLTAALGIAAHVEDLYR
CCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
NHFSELFSTQPPAEVQWPVMPMLSDYQPRDYACSGNGGIICHCELVTRRELEAAFHSAVP
HHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHCCC
PECIGGLRRRTRVMMGRCNGFFCSNQVAEIAGDRLDNTLVVGRVE
HHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure 
TQLNENVDVVVIGGGVVGCAVFRRFTLMGAKTLLLERGGDILSGASKANSAILHTGFDA
CCCCCCCCEEEECCHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCCCCCEEEECCCCC
PTGSLELQCMQAGYEEYLAIREKMNLPLLQTTAIVVAWNEEQLAALPGIVKQAHENGVTD
CCCCEEEHHHHCCHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC
VEQISAADVYLREPKLAEGVLGGVFVPGEYVIDPWSAPLAYVTQGVIHGGEYRFNCEVTN
HHHHCCCCEEECCCCHHHHCCCCEECCCCEEECCCCCCHHHHHHHHEECCEEEEEEEECC
ATQDEQGWLLTTRQGSVRTRLVINCAGNHGDLIDGLWRTPDYEIRPRKGQFLVYDKAAAA
CCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCC
DINAIILPVPTATTKGVLLCRTIFGNMILGPTAEEQTDRDRADVDEAVLKGLIEKGSQML
CCCEEEEECCCCCCCHHHHHHHHHCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCHHC
PTLGQYTVTATYAGLRPATEKKEYRIYHYPQDNWVSVGGIRSTGLTAALGIAAHVEDLYR
CCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
NHFSELFSTQPPAEVQWPVMPMLSDYQPRDYACSGNGGIICHCELVTRRELEAAFHSAVP
HHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHCCC
PECIGGLRRRTRVMMGRCNGFFCSNQVAEIAGDRLDNTLVVGRVE
HHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]