| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370935
Identifier: 157370935
GI number: 157370935
Start: 2966480
End: 2967697
Strand: Reverse
Name: 157370935
Synonym: Spro_2695
Alternate gene names: NA
Gene position: 2967697-2966480 (Counterclockwise)
Preceding gene: 157370936
Following gene: 157370931
Centisome position: 54.46
GC content: 52.46
Gene sequence:
>1218_bases ATGAGTCGATTATACGACGTCATTATTATTGGCGCTGGGCCTGCCGGTTTGGCCGCCGCCCGGACTTTATGGGACGAGGG AGTAAACCGCGTTCTGTTGTTGGAAAGAGAAAAGGAGGCGGGTGGTGTACCGCGCCATTGTCGCCACCCAACCTTCGGTA TGCAGACCTTCCACCGACCGATGAAAGGACATATTTGGGCCAAGCGGATATTGAGCCTGGTGCAAAACAATTGTGAAATC AGAACCGGCACCACGGTGGTGAATATCAAACCAGGTGGTGAAGTGACGGTCTCCAGCGACCGGGGTCTTGAAACCCTGGT AGGTAAACGCGTCATTATTGCCACAGGTGTGCGCGAAACGCCACGCCACGCCAGACTGGTTAGCGGCGTCAGGCCGCAGG GGGTGCTGACCGCGGGGGCATTGCAGCAGTTTATCTATTTGAAAAAACTAAAGCCGGGTATTCAGCCGGTGATCATAGGG TCTGAATTAGTCAGTTTTTCCACTATCTGGACGTTACGCAATGCGGGTATTAAAGCCCTGGCGCTGATTGATGAAAACAC CCGGCCAACTGCATTTCGTCTGGCAGCAATATATGCCCGCCTTATGGGGGTGAAACTCCATCTGGGGGCGCATGTTACCC AGATCAATGGCCGTGAACGGGTGGAAAGTATCGAATTTACCGCCGCAGACGGCAGTGCGCAGCAACTGGCCTGCGACAGT ATTATCTTTACCGGCCGTTTTACCGGCGAGTATACGCTGATTCGTAACAGCCACCTGGCCTACGAGCCAGAGAGTGGCCG TCCATGGTTCGATCAACATGGCCGTTGTTCTGACCGCGATTATTATGTGGTGGGCAATATGACTCATCCCGCTGATATGG GCGATCAGTGTTACCTGGAGGGGTTACGTGTAGGTCGGTTGGTTGCACAATCACTACTACGGCAAGGTGCGCAGCGTTTT GATATTCCAGTTCAATTGGATGAGGTATTCCGTATTGCTGCACCCAATGTTATCTCCGTCTCGCCAGAGGCCGCGGATCG CGTCACATTGAACGTGCGTGTTAACCGCTATCATAAAGGCGAAATCATCGTGCGTGATGGTGAAAAGGAACTTTACCGTG GTAAGCACCGTTGCTTGCCTGAACGTCGTATTCTTCTGAAAAATATCGATATTTCTGGCTTAACATCGGACAGTCAAATA AGGGTTATCGCCCGCTAG
Upstream 100 bases:
>100_bases GCGTCATGATGGGACGTTGTAACGGTTTTTTCTGTAGTAACCAGGTTGCTGAAATTGCGGGCGACCGTCTGGATAATACG CTGGTCGTCGGGAGGGTAGA
Downstream 100 bases:
>100_bases GCTTTCTTTACTCGGCCCATCGAAAAGCCTGCAAATTTGCAGGCTTATTTTTTTGGTCGTATTACAGTGAGTTATTTAAA TTCGTGCTTAACTTCTGACC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sarcosine Oxidase Alpha Subunit; NAD(FAD)-Dependent Dehydrogenase; Oxidoreductase; NADH Oxidase; Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Monooxygenase; Aminoacyl-TRNA Synthetase; Sarcosine Oxidase Subunit Alpha; Protein With Conserved CXXC Pairs; tRNA Uridine 5-Carboxymethylaminomethyl GidA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSRLYDVIIIGAGPAGLAAARTLWDEGVNRVLLLEREKEAGGVPRHCRHPTFGMQTFHRPMKGHIWAKRILSLVQNNCEI RTGTTVVNIKPGGEVTVSSDRGLETLVGKRVIIATGVRETPRHARLVSGVRPQGVLTAGALQQFIYLKKLKPGIQPVIIG SELVSFSTIWTLRNAGIKALALIDENTRPTAFRLAAIYARLMGVKLHLGAHVTQINGRERVESIEFTAADGSAQQLACDS IIFTGRFTGEYTLIRNSHLAYEPESGRPWFDQHGRCSDRDYYVVGNMTHPADMGDQCYLEGLRVGRLVAQSLLRQGAQRF DIPVQLDEVFRIAAPNVISVSPEAADRVTLNVRVNRYHKGEIIVRDGEKELYRGKHRCLPERRILLKNIDISGLTSDSQI RVIAR
Sequences:
>Translated_405_residues MSRLYDVIIIGAGPAGLAAARTLWDEGVNRVLLLEREKEAGGVPRHCRHPTFGMQTFHRPMKGHIWAKRILSLVQNNCEI RTGTTVVNIKPGGEVTVSSDRGLETLVGKRVIIATGVRETPRHARLVSGVRPQGVLTAGALQQFIYLKKLKPGIQPVIIG SELVSFSTIWTLRNAGIKALALIDENTRPTAFRLAAIYARLMGVKLHLGAHVTQINGRERVESIEFTAADGSAQQLACDS IIFTGRFTGEYTLIRNSHLAYEPESGRPWFDQHGRCSDRDYYVVGNMTHPADMGDQCYLEGLRVGRLVAQSLLRQGAQRF DIPVQLDEVFRIAAPNVISVSPEAADRVTLNVRVNRYHKGEIIVRDGEKELYRGKHRCLPERRILLKNIDISGLTSDSQI RVIAR >Mature_404_residues SRLYDVIIIGAGPAGLAAARTLWDEGVNRVLLLEREKEAGGVPRHCRHPTFGMQTFHRPMKGHIWAKRILSLVQNNCEIR TGTTVVNIKPGGEVTVSSDRGLETLVGKRVIIATGVRETPRHARLVSGVRPQGVLTAGALQQFIYLKKLKPGIQPVIIGS ELVSFSTIWTLRNAGIKALALIDENTRPTAFRLAAIYARLMGVKLHLGAHVTQINGRERVESIEFTAADGSAQQLACDSI IFTGRFTGEYTLIRNSHLAYEPESGRPWFDQHGRCSDRDYYVVGNMTHPADMGDQCYLEGLRVGRLVAQSLLRQGAQRFD IPVQLDEVFRIAAPNVISVSPEAADRVTLNVRVNRYHKGEIIVRDGEKELYRGKHRCLPERRILLKNIDISGLTSDSQIR VIAR
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45020; Mature: 44888
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLYDVIIIGAGPAGLAAARTLWDEGVNRVLLLEREKEAGGVPRHCRHPTFGMQTFHRP CCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCCCCCCCHHHHCCC MKGHIWAKRILSLVQNNCEIRTGTTVVNIKPGGEVTVSSDRGLETLVGKRVIIATGVRET CCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCEEEECCCCHHHHHCCEEEEEECCCCC PRHARLVSGVRPQGVLTAGALQQFIYLKKLKPGIQPVIIGSELVSFSTIWTLRNAGIKAL CHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHEEECCCCEEEE ALIDENTRPTAFRLAAIYARLMGVKLHLGAHVTQINGRERVESIEFTAADGSAQQLACDS EEEECCCCCHHHHHHHHHHHHHCEEEECCCEEEECCCHHHHEEEEEEECCCCHHHEEECE IIFTGRFTGEYTLIRNSHLAYEPESGRPWFDQHGRCSDRDYYVVGNMTHPADMGDQCYLE EEEEEEECCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHH GLRVGRLVAQSLLRQGAQRFDIPVQLDEVFRIAAPNVISVSPEAADRVTLNVRVNRYHKG HHHHHHHHHHHHHHCCHHHCCCCEEHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEECC EIIVRDGEKELYRGKHRCLPERRILLKNIDISGLTSDSQIRVIAR EEEEECCCHHHHCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure SRLYDVIIIGAGPAGLAAARTLWDEGVNRVLLLEREKEAGGVPRHCRHPTFGMQTFHRP CCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCCCCCCCHHHHCCC MKGHIWAKRILSLVQNNCEIRTGTTVVNIKPGGEVTVSSDRGLETLVGKRVIIATGVRET CCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCEEEECCCCHHHHHCCEEEEEECCCCC PRHARLVSGVRPQGVLTAGALQQFIYLKKLKPGIQPVIIGSELVSFSTIWTLRNAGIKAL CHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHEEECCCCEEEE ALIDENTRPTAFRLAAIYARLMGVKLHLGAHVTQINGRERVESIEFTAADGSAQQLACDS EEEECCCCCHHHHHHHHHHHHHCEEEECCCEEEECCCHHHHEEEEEEECCCCHHHEEECE IIFTGRFTGEYTLIRNSHLAYEPESGRPWFDQHGRCSDRDYYVVGNMTHPADMGDQCYLE EEEEEEECCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHH GLRVGRLVAQSLLRQGAQRFDIPVQLDEVFRIAAPNVISVSPEAADRVTLNVRVNRYHKG HHHHHHHHHHHHHHCCHHHCCCCEEHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEEECC EIIVRDGEKELYRGKHRCLPERRILLKNIDISGLTSDSQIRVIAR EEEEECCCHHHHCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA