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The map label for this gene is ycjO [C]

Identifier: 157370765

GI number: 157370765

Start: 2773851

End: 2774843

Strand: Reverse

Name: ycjO [C]

Synonym: Spro_2525

Alternate gene names: 157370765

Gene position: 2774843-2773851 (Counterclockwise)

Preceding gene: 157370766

Following gene: 157370764

Centisome position: 50.93

GC content: 59.72

Gene sequence:

>993_bases
ATGAAACGCGATACTCACGCTTTATCCCTGACGGCCACGCCAGCCCCTGCCCAAGCGCGGTCGGTCAGGCGCAGCAAGCT
TAATCACCAACAGCGTCGCAGCCGTATCGCCTGGCTGCTGGTGGCACCGGCCATGCTGTTGCTGGCGGCGGTGGCGGGTT
GGCCACTGCTGCGCACCCTGTTTTACAGCTTCACCGACGCCATGCTGGATGCGCCGGACGACTATCGCTTTGTTGGTTTC
GCCAACTACCTTGACCTGACTACGGACGGCCACCATTACGGCGTGCTGGCGGATCCGCTGTGGTGGCTGGCGGTGGGAAA
CACCTTGCGCTTTAGCCTGTTATCCGTCTCGCTGGAGCTGGTGTTTGGCATGCTGCTGGCGCTGCTGATGAATCAGAAAT
TCCGTGGGCAGGGGTTGGTCCGCACCGCCATTCTGGTGCCCTGGGCTATCCCGACCATTGTTTCCGCCAAGATGTGGGGC
TGGATGTTTCATGACCAGTATGGAGTGGTCAACGACCTGCTGCTCAAAAGCGGCGTCATCGCCACGCCTTTGGCCTGGGT
GGCGGAACCGGGGCTGTCGATGTGGGCGGTGGTGATTGCCGACGTCTGGAAAACCACGCCGTTTATGGCCTTGATGTTGC
TGGCTGCGCTGCAACTGATCCCTGGCGATTTGTATGAGGCCGCGCGGGTCGATGGTGCCAACGCCTGGCAGCGCTTTCGC
CGCATTACCTTGCCGTTGATTATGCCGGCGATGATTGTTGCGCTGATTTTCCGGGTGATGGATGCGTTGCGGGTGTTTGA
TCTGATTTATGTGCTGACCTCGAATAGCGAGGCTACGGTGTCGGTATCCGGTTATGCCCGCGACCGCATGGTCAGCTATC
AGGAAATGGGTTCTGGCTCGGCCGCTTCGGTGCTGGTGTTTATGATGGTGGCAGGTATCGCCGCCTGTTTCCTCACGCTG
GGTCGCCTGAATGATAAGGAGAAACGCGCATGA

Upstream 100 bases:

>100_bases
CACGGCAGTGGCGGATCTACAGCAAAGACTGGAACGGATTAAAGCCAGAGGATGGCGTTGAAAGCAGGGTAACTATCCAT
TAACCGCCGGAGTCTGATGC

Downstream 100 bases:

>100_bases
AACTGAGTCGCCAACAGCAAAAGTACGGCCACAAGGCGCTGATATTTGCCGCTGCCGCATTGGCCAGCCTGATTTGCCTG
TTTCCGTTCTATTACGCGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKRDTHALSLTATPAPAQARSVRRSKLNHQQRRSRIAWLLVAPAMLLLAAVAGWPLLRTLFYSFTDAMLDAPDDYRFVGF
ANYLDLTTDGHHYGVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAKMWG
WMFHDQYGVVNDLLLKSGVIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARVDGANAWQRFR
RITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTL
GRLNDKEKRA

Sequences:

>Translated_330_residues
MKRDTHALSLTATPAPAQARSVRRSKLNHQQRRSRIAWLLVAPAMLLLAAVAGWPLLRTLFYSFTDAMLDAPDDYRFVGF
ANYLDLTTDGHHYGVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAKMWG
WMFHDQYGVVNDLLLKSGVIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARVDGANAWQRFR
RITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTL
GRLNDKEKRA
>Mature_330_residues
MKRDTHALSLTATPAPAQARSVRRSKLNHQQRRSRIAWLLVAPAMLLLAAVAGWPLLRTLFYSFTDAMLDAPDDYRFVGF
ANYLDLTTDGHHYGVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAKMWG
WMFHDQYGVVNDLLLKSGVIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARVDGANAWQRFR
RITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTL
GRLNDKEKRA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=276, Percent_Identity=31.8840579710145, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1790465, Length=266, Percent_Identity=30.0751879699248, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789861, Length=246, Percent_Identity=31.7073170731707, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082099, Length=237, Percent_Identity=28.2700421940928, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787369, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36638; Mature: 36638

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDTHALSLTATPAPAQARSVRRSKLNHQQRRSRIAWLLVAPAMLLLAAVAGWPLLRTL
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FYSFTDAMLDAPDDYRFVGFANYLDLTTDGHHYGVLADPLWWLAVGNTLRFSLLSVSLEL
HHHHHHHHHCCCCCCEEEEEHHEEEECCCCCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH
VFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAKMWGWMFHDQYGVVNDLLLKSGVI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH
ATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARVDGANAWQRFR
HCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
RITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHCCCCH
AASVLVFMMVAGIAACFLTLGRLNDKEKRA
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MKRDTHALSLTATPAPAQARSVRRSKLNHQQRRSRIAWLLVAPAMLLLAAVAGWPLLRTL
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FYSFTDAMLDAPDDYRFVGFANYLDLTTDGHHYGVLADPLWWLAVGNTLRFSLLSVSLEL
HHHHHHHHHCCCCCCEEEEEHHEEEECCCCCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH
VFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAKMWGWMFHDQYGVVNDLLLKSGVI
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH
ATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAALQLIPGDLYEAARVDGANAWQRFR
HCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
RITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHCCCCH
AASVLVFMMVAGIAACFLTLGRLNDKEKRA
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]