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The map label for this gene is ugpB [C]

Identifier: 157370766

GI number: 157370766

Start: 2774883

End: 2776148

Strand: Reverse

Name: ugpB [C]

Synonym: Spro_2526

Alternate gene names: 157370766

Gene position: 2776148-2774883 (Counterclockwise)

Preceding gene: 157370768

Following gene: 157370765

Centisome position: 50.95

GC content: 58.69

Gene sequence:

>1266_bases
ATGAGAAGATTGATACCGAGTATGGTTGCTGCCGCACTGGCGTTGTCAGCGGGTCAGGCGCAGGCCGACACGCTGCGCAT
GCAGTGCGCACCCAGCAAAGAGGGGCGCCAGTACTGCAATGAGATCAAGCAGCGCTTCGAGGCCCAGACTGGCCATAGCC
TGGAGTTTATCGATCTGCCTCCTGCTTCTGATGAAAAACTGTCGCTGTTCCAGCAACTGTTTGCGGCCAAAGACGCCAGC
GCCATCGATCTGTTCCAGGCCGATACCGTGTGGATCGGCGTACTGAACAAGCACCTGCTGGATTTGACCGACAGCGTGAG
CGACATCCAACCGGATTTTTTCCCTGCCGCCTGGCAAAACAACGTGGTTAACGGCCGGGTTAAAGCGGTACCGGCCTATC
TGGACAGCGGCGCGTTCTACTACCGTAAGGATCTGCTGGAAAAATACGGCGAACAGCCGCCGGTAACCTGGACCGATCTG
ACCCGCATCGCCACCCGCATTCAGCAGGGTGAACGTGCCGCCGGTCATAAGAACTTCTGGGGGTTGGTGTTCCAGGGGAA
ATCTTATGAAGGGCTGACCTGCAACGCACTCGAATGGGTGGCTTCACAGAACGGCGGCAGTTTTATCAACGCCGAAGGCA
ATATCACCATCAACAATTCACAGGCGGCGCAGGCGCTGGATATGGCCGCCGGCTGGATCGGCAAGATTACCCCCAGAGGA
ACGCTTGGCTACATGGAGGAGGAGTCGCGGGCGGTATTCCAGAACGGTGATGCCATGTTTATGCGCAACTGGCCATACGC
CTACGTGCTGGCACAGGACAACAGCAGTGCGATCCGCGGCAAGGTGGGCGTGATGCCGCTGCCGAAAGGCGCAGATGGCC
GTTCAGTCAGTGCGTTGGGCGGTTGGCAGTGGGCGATCAACGGTTATACCAAAAACCCTCAGGCGGCGATCGCGCTGCTG
AAAATCGTCAGCGATGCCGAATCGCAAAAAAGGGCGCTGGCACTGCTGGGCCAGGCTCCTTCCCGCACGGCGTTATACGA
CGATCCGCAGGTACTGGCACAGGCGCCTTATCTGGCGGACTTCAAGGGCATTTTCGCCCAGGCGATGCCGCGCCCGGCGA
CCCAAACCAAAAGGCAGTATGCGCAGGTCTCCCGGGCTATCTACAACGCCACCTTTAACGTGCTGCGCGGTGATAGTGAC
GGTGTCACGGCAGTGGCGGATCTACAGCAAAGACTGGAACGGATTAAAGCCAGAGGATGGCGTTGA

Upstream 100 bases:

>100_bases
GTTTCTATATCGTAGCGATGAAAAACGATTTCCGCCAATGACCCGCCTTCGATAGCTTGCTCCCATGCCGGTATTCCCAG
CCGCCACCCCAGAGGATGCC

Downstream 100 bases:

>100_bases
AAGCAGGGTAACTATCCATTAACCGCCGGAGTCTGATGCATGAAACGCGATACTCACGCTTTATCCCTGACGGCCACGCC
AGCCCCTGCCCAAGCGCGGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRRLIPSMVAAALALSAGQAQADTLRMQCAPSKEGRQYCNEIKQRFEAQTGHSLEFIDLPPASDEKLSLFQQLFAAKDAS
AIDLFQADTVWIGVLNKHLLDLTDSVSDIQPDFFPAAWQNNVVNGRVKAVPAYLDSGAFYYRKDLLEKYGEQPPVTWTDL
TRIATRIQQGERAAGHKNFWGLVFQGKSYEGLTCNALEWVASQNGGSFINAEGNITINNSQAAQALDMAAGWIGKITPRG
TLGYMEEESRAVFQNGDAMFMRNWPYAYVLAQDNSSAIRGKVGVMPLPKGADGRSVSALGGWQWAINGYTKNPQAAIALL
KIVSDAESQKRALALLGQAPSRTALYDDPQVLAQAPYLADFKGIFAQAMPRPATQTKRQYAQVSRAIYNATFNVLRGDSD
GVTAVADLQQRLERIKARGWR

Sequences:

>Translated_421_residues
MRRLIPSMVAAALALSAGQAQADTLRMQCAPSKEGRQYCNEIKQRFEAQTGHSLEFIDLPPASDEKLSLFQQLFAAKDAS
AIDLFQADTVWIGVLNKHLLDLTDSVSDIQPDFFPAAWQNNVVNGRVKAVPAYLDSGAFYYRKDLLEKYGEQPPVTWTDL
TRIATRIQQGERAAGHKNFWGLVFQGKSYEGLTCNALEWVASQNGGSFINAEGNITINNSQAAQALDMAAGWIGKITPRG
TLGYMEEESRAVFQNGDAMFMRNWPYAYVLAQDNSSAIRGKVGVMPLPKGADGRSVSALGGWQWAINGYTKNPQAAIALL
KIVSDAESQKRALALLGQAPSRTALYDDPQVLAQAPYLADFKGIFAQAMPRPATQTKRQYAQVSRAIYNATFNVLRGDSD
GVTAVADLQQRLERIKARGWR
>Mature_421_residues
MRRLIPSMVAAALALSAGQAQADTLRMQCAPSKEGRQYCNEIKQRFEAQTGHSLEFIDLPPASDEKLSLFQQLFAAKDAS
AIDLFQADTVWIGVLNKHLLDLTDSVSDIQPDFFPAAWQNNVVNGRVKAVPAYLDSGAFYYRKDLLEKYGEQPPVTWTDL
TRIATRIQQGERAAGHKNFWGLVFQGKSYEGLTCNALEWVASQNGGSFINAEGNITINNSQAAQALDMAAGWIGKITPRG
TLGYMEEESRAVFQNGDAMFMRNWPYAYVLAQDNSSAIRGKVGVMPLPKGADGRSVSALGGWQWAINGYTKNPQAAIALL
KIVSDAESQKRALALLGQAPSRTALYDDPQVLAQAPYLADFKGIFAQAMPRPATQTKRQYAQVSRAIYNATFNVLRGDSD
GVTAVADLQQRLERIKARGWR

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46263; Mature: 46263

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLIPSMVAAALALSAGQAQADTLRMQCAPSKEGRQYCNEIKQRFEAQTGHSLEFIDLP
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
PASDEKLSLFQQLFAAKDASAIDLFQADTVWIGVLNKHLLDLTDSVSDIQPDFFPAAWQN
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHCCHHHCCCCCCCHHHCC
NVVNGRVKAVPAYLDSGAFYYRKDLLEKYGEQPPVTWTDLTRIATRIQQGERAAGHKNFW
CCCCCEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE
GLVFQGKSYEGLTCNALEWVASQNGGSFINAEGNITINNSQAAQALDMAAGWIGKITPRG
EEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCC
TLGYMEEESRAVFQNGDAMFMRNWPYAYVLAQDNSSAIRGKVGVMPLPKGADGRSVSALG
CCCCCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECC
GWQWAINGYTKNPQAAIALLKIVSDAESQKRALALLGQAPSRTALYDDPQVLAQAPYLAD
CEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHH
FKGIFAQAMPRPATQTKRQYAQVSRAIYNATFNVLRGDSDGVTAVADLQQRLERIKARGW
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MRRLIPSMVAAALALSAGQAQADTLRMQCAPSKEGRQYCNEIKQRFEAQTGHSLEFIDLP
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
PASDEKLSLFQQLFAAKDASAIDLFQADTVWIGVLNKHLLDLTDSVSDIQPDFFPAAWQN
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHCCHHHCCCCCCCHHHCC
NVVNGRVKAVPAYLDSGAFYYRKDLLEKYGEQPPVTWTDLTRIATRIQQGERAAGHKNFW
CCCCCEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE
GLVFQGKSYEGLTCNALEWVASQNGGSFINAEGNITINNSQAAQALDMAAGWIGKITPRG
EEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCC
TLGYMEEESRAVFQNGDAMFMRNWPYAYVLAQDNSSAIRGKVGVMPLPKGADGRSVSALG
CCCCCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECC
GWQWAINGYTKNPQAAIALLKIVSDAESQKRALALLGQAPSRTALYDDPQVLAQAPYLAD
CEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHH
FKGIFAQAMPRPATQTKRQYAQVSRAIYNATFNVLRGDSDGVTAVADLQQRLERIKARGW
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]