| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is adhB [H]
Identifier: 157370730
GI number: 157370730
Start: 2732434
End: 2733732
Strand: Reverse
Name: adhB [H]
Synonym: Spro_2490
Alternate gene names: 157370730
Gene position: 2733732-2732434 (Counterclockwise)
Preceding gene: 157370731
Following gene: 157370729
Centisome position: 50.17
GC content: 58.51
Gene sequence:
>1299_bases ATGAGCAAATTAAAGAAAGCCGCTGGATGGGGCAGCCTGGCCGTCATCGCCGTAGCAGTCACCGGCGCTATTATCAGCTG GCAGCCGGAAATTTCGCCTCGTGATGTGAACGAGACCCAGGTTTTTAGTCAGCAACAGATTGCCCGTGGCAAAATGCTGG CCGATCTCGGCGACTGTTCGGTTTGCCATACCCGGCCGGGCGGTAAACGCAATACCGGCGGGCTGGCGATGGAGATCCCA TTCGGCACCATCTACACCACCAACATCACTCCGGATAACGAAACCGGCATTGGCAAATGGTCGTATGCTGCCTTTGAACG GGCAATGCGTCATGGGGTCGATCGCCAGGGGCGCTATCTCTATCCTGCTTTCCCCTATACCGCCTTTACCCGCACCAGTG ACGAAGATCTGCAGGCGTTATACGCCTACCTGATGTCGCAACCGGCGGTGAACTACCAGCCACCCGTTACCGCACTGAGT TTTCCGTTTAACATTCGCCAGGGCATAGTCACCTGGAACTGGCTATTCCTGACGCCGGGCGCGATGAAGGCAGACCCCGA CCAAAGCGCCGAATGGAATCGGGGAGCCTATCTTACCGAGGGGCTGGGTCATTGCAGCGCCTGTCATTCACCCCGCAATC TGATGTTTGGCGAAAAAGGCGGCAGTGCGCACTTGACCGGCGGCGTGGCGGAGGCCTGGACGGCACCGTCGCTCACCGGC AGTTCGGTGGCACCGCTGGATTGGACCCGGCAGGATCTCCTCAGCTTTATGCGCAGCGGATACTCGGCAAATCACGGCGT AGCGGCAGGGCCGATGGCACCGGTAATTGAAGAGGGGCTTTCACGTCTGCCGGAGCAGGACCTGCAGGCCATCGCTACCT ATCTTCGCAGCTACCATCCGGCGCAAGCCAAGGCTGCGGAGGCACAAAGACTGAACGACTGGGCAGAGTTAAAAACGCAG CCGTTAACCACCGAAGGGGCGCGTATTTTCTCCGGGGCCTGCATGGCTTGCCATGCTCAGGAAAAGGGGGCGCAAATGGC CGGTGTCAGGCCTTCACTGGCGCTGAATACCAATCTGTTTGCCGATACGCCAGACAATGCGATTAGGGTGGTGCTGGACG GTATCCAGCGGCCGGCCAATATCAATCTGGGATATATGCCGGCATTCCGTCATAACCTGAACGATGGACAGATTGCGGCG TTGCTTGATTTCCTGCGGCAAAGTTACGCCGGGAAAGCGCCGTGGCCTGACCTGCAGGCGCAAGTCAGCCGCTTACGCAG TGAGACTGAAGATAGATAG
Upstream 100 bases:
>100_bases TGGGGGTGCGCCTGCGGGAAGTGCCATTTACTCCCGAGCAGGTGCTGAAAGCGTTAAAACAGCAGGCTTCCGCCAACGCA GCAACCAGGGATAAGTCATT
Downstream 100 bases:
>100_bases GTTTGGTAAATAGATAGGTTCGTTAAAATGGCGGGGGCCATTGCAGGCCCCCAATTTAGCATTTGCCCCGTAAACTCTCG CCCCCTCGGGCGGGGATATA
Product: gluconate 2-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSKLKKAAGWGSLAVIAVAVTGAIISWQPEISPRDVNETQVFSQQQIARGKMLADLGDCSVCHTRPGGKRNTGGLAMEIP FGTIYTTNITPDNETGIGKWSYAAFERAMRHGVDRQGRYLYPAFPYTAFTRTSDEDLQALYAYLMSQPAVNYQPPVTALS FPFNIRQGIVTWNWLFLTPGAMKADPDQSAEWNRGAYLTEGLGHCSACHSPRNLMFGEKGGSAHLTGGVAEAWTAPSLTG SSVAPLDWTRQDLLSFMRSGYSANHGVAAGPMAPVIEEGLSRLPEQDLQAIATYLRSYHPAQAKAAEAQRLNDWAELKTQ PLTTEGARIFSGACMACHAQEKGAQMAGVRPSLALNTNLFADTPDNAIRVVLDGIQRPANINLGYMPAFRHNLNDGQIAA LLDFLRQSYAGKAPWPDLQAQVSRLRSETEDR
Sequences:
>Translated_432_residues MSKLKKAAGWGSLAVIAVAVTGAIISWQPEISPRDVNETQVFSQQQIARGKMLADLGDCSVCHTRPGGKRNTGGLAMEIP FGTIYTTNITPDNETGIGKWSYAAFERAMRHGVDRQGRYLYPAFPYTAFTRTSDEDLQALYAYLMSQPAVNYQPPVTALS FPFNIRQGIVTWNWLFLTPGAMKADPDQSAEWNRGAYLTEGLGHCSACHSPRNLMFGEKGGSAHLTGGVAEAWTAPSLTG SSVAPLDWTRQDLLSFMRSGYSANHGVAAGPMAPVIEEGLSRLPEQDLQAIATYLRSYHPAQAKAAEAQRLNDWAELKTQ PLTTEGARIFSGACMACHAQEKGAQMAGVRPSLALNTNLFADTPDNAIRVVLDGIQRPANINLGYMPAFRHNLNDGQIAA LLDFLRQSYAGKAPWPDLQAQVSRLRSETEDR >Mature_431_residues SKLKKAAGWGSLAVIAVAVTGAIISWQPEISPRDVNETQVFSQQQIARGKMLADLGDCSVCHTRPGGKRNTGGLAMEIPF GTIYTTNITPDNETGIGKWSYAAFERAMRHGVDRQGRYLYPAFPYTAFTRTSDEDLQALYAYLMSQPAVNYQPPVTALSF PFNIRQGIVTWNWLFLTPGAMKADPDQSAEWNRGAYLTEGLGHCSACHSPRNLMFGEKGGSAHLTGGVAEAWTAPSLTGS SVAPLDWTRQDLLSFMRSGYSANHGVAAGPMAPVIEEGLSRLPEQDLQAIATYLRSYHPAQAKAAEAQRLNDWAELKTQP LTTEGARIFSGACMACHAQEKGAQMAGVRPSLALNTNLFADTPDNAIRVVLDGIQRPANINLGYMPAFRHNLNDGQIAAL LDFLRQSYAGKAPWPDLQAQVSRLRSETEDR
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 47052; Mature: 46920
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLKKAAGWGSLAVIAVAVTGAIISWQPEISPRDVNETQVFSQQQIARGKMLADLGDCS CCCHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VCHTRPGGKRNTGGLAMEIPFGTIYTTNITPDNETGIGKWSYAAFERAMRHGVDRQGRYL EEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE YPAFPYTAFTRTSDEDLQALYAYLMSQPAVNYQPPVTALSFPFNIRQGIVTWNWLFLTPG EECCCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCEEEEEEEECCC AMKADPDQSAEWNRGAYLTEGLGHCSACHSPRNLMFGEKGGSAHLTGGVAEAWTAPSLTG CCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCEECCCCCCCEECCCHHHHCCCCCCCC SSVAPLDWTRQDLLSFMRSGYSANHGVAAGPMAPVIEEGLSRLPEQDLQAIATYLRSYHP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC AQAKAAEAQRLNDWAELKTQPLTTEGARIFSGACMACHAQEKGAQMAGVRPSLALNTNLF HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHEECCHHCCCHHCCCCCCEEECCCEE ADTPDNAIRVVLDGIQRPANINLGYMPAFRHNLNDGQIAALLDFLRQSYAGKAPWPDLQA CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH QVSRLRSETEDR HHHHHHHHCCCC >Mature Secondary Structure SKLKKAAGWGSLAVIAVAVTGAIISWQPEISPRDVNETQVFSQQQIARGKMLADLGDCS CCHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VCHTRPGGKRNTGGLAMEIPFGTIYTTNITPDNETGIGKWSYAAFERAMRHGVDRQGRYL EEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE YPAFPYTAFTRTSDEDLQALYAYLMSQPAVNYQPPVTALSFPFNIRQGIVTWNWLFLTPG EECCCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCEEEEEEEECCC AMKADPDQSAEWNRGAYLTEGLGHCSACHSPRNLMFGEKGGSAHLTGGVAEAWTAPSLTG CCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCEECCCCCCCEECCCHHHHCCCCCCCC SSVAPLDWTRQDLLSFMRSGYSANHGVAAGPMAPVIEEGLSRLPEQDLQAIATYLRSYHP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC AQAKAAEAQRLNDWAELKTQPLTTEGARIFSGACMACHAQEKGAQMAGVRPSLALNTNLF HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHEECCHHCCCHHCCCCCCEEECCCEE ADTPDNAIRVVLDGIQRPANINLGYMPAFRHNLNDGQIAALLDFLRQSYAGKAPWPDLQA CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH QVSRLRSETEDR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA