| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is xdhD [C]
Identifier: 157370731
GI number: 157370731
Start: 2733729
End: 2736014
Strand: Reverse
Name: xdhD [C]
Synonym: Spro_2491
Alternate gene names: 157370731
Gene position: 2736014-2733729 (Counterclockwise)
Preceding gene: 157370732
Following gene: 157370730
Centisome position: 50.21
GC content: 60.28
Gene sequence:
>2286_bases ATGAGCCGTCTGGAAATAACCCGCCGCCGCCTGTTACAGGCCGGTGGCGTGGTGATGGTCAGCAGCCTGTTGCCGGTTTC GCTTAATACCCTTGCCGCCGAGCCTGCCACCCTGGGGAACCTGCCGCTGGATCGCGTGGACAGTTTTATCGGTCTGACCG CCGACGGCCGGGTCACCGCCTTTAACGGCCATGTGGATCTCGGTACTGGCATTCGCACGGCGTTGGCGCAAATTGTTGCC GATGAAATCTGCGTCCCTTTTGATCAGGTGACGGTCATTCTGGGGGATACCCAGCGCACGCCGGATCAGGGGCCGACCAT CGCCAGTGCCACCATTCAGGTGACTTCAATACCGCTGCGTCAGGCGGCGGCACAGGTGCGGCAATTGCTGCTGGGGCTGG CCGCTCGCGCTTTCGCGTTGCCGGTAGACAGGCTGCGTGCAGAAAATGGCCGGGTATTTGCAGCGGATAAACCCCATGTC AGCCTGAGTTATGGCGATCTGGCCAGAGGGCAAAACTTACAGGTGGCACTGGATAAAACGGTCATGTTGAAGAGCGTGAC GGAGAGTCGTTACGTTGGCAAGGCGGTGCCACGGGTGGATATCCCGGCCAAGGTCACCGGCCAACTGACCTATGTGCACG ATCTTCGCCTGCCGGGCATGCTGCACGGCAGAGTGGTGCGGCCGCCTTATATCGGGGCTGACAGCAGTGCCCCGCTGGGC AGTGGGCTGCTGTCGGTGGACAGAGCTTCCATTGCTCATTTGCCAGGTATCGTAAAGCTGGTGGTGATTAACGATTTTAT CGGCATCGTCGCCGAGCGTGAAGAGCAGGCGATCGCAGCCATGCGGCAGCTGAAAACCGTGTGGCGCCCGTGGTCCGGGC TGCCGGATCTCTCGGCGGATGGGCTGCATGCGGCGTTGGTGGCTAACCCGAAAACCGACCGCGTACTGCGTGATGATGCC GGGGTCGATGCCGCGCTGGGGTCGTTACATACCGAGGTTAATGCCGATTACGTCTGGCCCTATCATCAGCATGCTTCCAT CGGGCCTTCCTGTGCGGTGGCCGACGTCAGCAGTGAGCATGCAGAAATTTGGTCCGGGACGCAAAACCCTCACGATCTGC GTAAAGACATTGCCCATTTGCTCGACCGGCAGCCGGAGCAGGTACACATCAACCGTATGGAGGCCTCAGGTTGCTATGGC CGCAACTGCGCCGATGACGTATCGGCAGATGCCGCACTGTTATCACAGGCGACCGGCAAACCGGTCAGGGTGCAGTTGAT GCGCGAGCAAGAGTCGGGCTGGGAGCCCAAGGGCACCGGGCAGTTGATCCGGGTGCGCGGTGGGCTGGATCAGCACCGGC AGGTGGCGGCCTATGAGTTGAAAACCAGTTATCCTTCCAATAATGCCGTGACATTGTCACTGGTGTTGGCCGGCAAGGTG GCCAATCGGGCCGACGTACAGCAGATGGGCGACAGAACCGCCATTCCGCAGTATGAATATCCGAACATGCGGGTGATTTG CCAGGACGCTGCGCCGATCGTTCGGGCTTCCTGGATGCGCGGGGTGTCGGCGCTGCCCAACGTGTTCGCCCATGAGTCGT GGATTGATGAACTGGCATGGCATGCCGGGCAGGATCCGATCGCTTTCCGCCTGCAATATCTGAAAGACCCGCGTGCGGTC GCGTTGATCAATGCGCTGAAGAAACAGGCTAACTGGCAGCAGGGGCCGTCGCATCGCAACCCGGCACCGGATACGCAAGC GTGGGTCAGTGGACGTGGCTTTGCTTATGCGCGTTACTTCCACAGCAAATTCCCCGGTTTCGGCGCCGCCTGGGCTGCCT GGGTGTGTGACCTTAGCGTCAATCGCCACAGCGGTCAGATCAAGCTCGATAAAATCTTTGTTGCCCATGACTGCGGACGC ATCATCAACCCGGCCGGAGTGCGCCATCAGGTGCATGGCAATATTCTTCAGTCCGCCAGCCGGGTGCTGAAAGAGTTTGT CACCTTTGACGCTTCGGCGGTGACGTCGCTGGACTGGGGCGGCTACCCGATCCTGCGTTTTGACGAGTTGCCGCAGGTGG ATGTTCAATTGCTGGACTATCCGGATGAGCCGCCGATGGGGGCGGGAGAATCGGCTTCGGTGCCGAGTGCGGCCGCTATC GCCAATGCGTTATTTGATGCGCTGGGGGTGCGCCTGCGGGAAGTGCCATTTACTCCCGAGCAGGTGCTGAAAGCGTTAAA ACAGCAGGCTTCCGCCAACGCAGCAACCAGGGATAAGTCATTATGA
Upstream 100 bases:
>100_bases AAAACGAACTGGCCTATAACCTGTGTCGTTGCGGCACCCATATCGAAATCCTGCGCGCCGCCGCCAAAGCCCGGCAGCTG TTGGCTGAAAGGGGGCAGGC
Downstream 100 bases:
>100_bases GCAAATTAAAGAAAGCCGCTGGATGGGGCAGCCTGGCCGTCATCGCCGTAGCAGTCACCGGCGCTATTATCAGCTGGCAG CCGGAAATTTCGCCTCGTGA
Product: aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: ALDH [H]
Number of amino acids: Translated: 761; Mature: 760
Protein sequence:
>761_residues MSRLEITRRRLLQAGGVVMVSSLLPVSLNTLAAEPATLGNLPLDRVDSFIGLTADGRVTAFNGHVDLGTGIRTALAQIVA DEICVPFDQVTVILGDTQRTPDQGPTIASATIQVTSIPLRQAAAQVRQLLLGLAARAFALPVDRLRAENGRVFAADKPHV SLSYGDLARGQNLQVALDKTVMLKSVTESRYVGKAVPRVDIPAKVTGQLTYVHDLRLPGMLHGRVVRPPYIGADSSAPLG SGLLSVDRASIAHLPGIVKLVVINDFIGIVAEREEQAIAAMRQLKTVWRPWSGLPDLSADGLHAALVANPKTDRVLRDDA GVDAALGSLHTEVNADYVWPYHQHASIGPSCAVADVSSEHAEIWSGTQNPHDLRKDIAHLLDRQPEQVHINRMEASGCYG RNCADDVSADAALLSQATGKPVRVQLMREQESGWEPKGTGQLIRVRGGLDQHRQVAAYELKTSYPSNNAVTLSLVLAGKV ANRADVQQMGDRTAIPQYEYPNMRVICQDAAPIVRASWMRGVSALPNVFAHESWIDELAWHAGQDPIAFRLQYLKDPRAV ALINALKKQANWQQGPSHRNPAPDTQAWVSGRGFAYARYFHSKFPGFGAAWAAWVCDLSVNRHSGQIKLDKIFVAHDCGR IINPAGVRHQVHGNILQSASRVLKEFVTFDASAVTSLDWGGYPILRFDELPQVDVQLLDYPDEPPMGAGESASVPSAAAI ANALFDALGVRLREVPFTPEQVLKALKQQASANAATRDKSL
Sequences:
>Translated_761_residues MSRLEITRRRLLQAGGVVMVSSLLPVSLNTLAAEPATLGNLPLDRVDSFIGLTADGRVTAFNGHVDLGTGIRTALAQIVA DEICVPFDQVTVILGDTQRTPDQGPTIASATIQVTSIPLRQAAAQVRQLLLGLAARAFALPVDRLRAENGRVFAADKPHV SLSYGDLARGQNLQVALDKTVMLKSVTESRYVGKAVPRVDIPAKVTGQLTYVHDLRLPGMLHGRVVRPPYIGADSSAPLG SGLLSVDRASIAHLPGIVKLVVINDFIGIVAEREEQAIAAMRQLKTVWRPWSGLPDLSADGLHAALVANPKTDRVLRDDA GVDAALGSLHTEVNADYVWPYHQHASIGPSCAVADVSSEHAEIWSGTQNPHDLRKDIAHLLDRQPEQVHINRMEASGCYG RNCADDVSADAALLSQATGKPVRVQLMREQESGWEPKGTGQLIRVRGGLDQHRQVAAYELKTSYPSNNAVTLSLVLAGKV ANRADVQQMGDRTAIPQYEYPNMRVICQDAAPIVRASWMRGVSALPNVFAHESWIDELAWHAGQDPIAFRLQYLKDPRAV ALINALKKQANWQQGPSHRNPAPDTQAWVSGRGFAYARYFHSKFPGFGAAWAAWVCDLSVNRHSGQIKLDKIFVAHDCGR IINPAGVRHQVHGNILQSASRVLKEFVTFDASAVTSLDWGGYPILRFDELPQVDVQLLDYPDEPPMGAGESASVPSAAAI ANALFDALGVRLREVPFTPEQVLKALKQQASANAATRDKSL >Mature_760_residues SRLEITRRRLLQAGGVVMVSSLLPVSLNTLAAEPATLGNLPLDRVDSFIGLTADGRVTAFNGHVDLGTGIRTALAQIVAD EICVPFDQVTVILGDTQRTPDQGPTIASATIQVTSIPLRQAAAQVRQLLLGLAARAFALPVDRLRAENGRVFAADKPHVS LSYGDLARGQNLQVALDKTVMLKSVTESRYVGKAVPRVDIPAKVTGQLTYVHDLRLPGMLHGRVVRPPYIGADSSAPLGS GLLSVDRASIAHLPGIVKLVVINDFIGIVAEREEQAIAAMRQLKTVWRPWSGLPDLSADGLHAALVANPKTDRVLRDDAG VDAALGSLHTEVNADYVWPYHQHASIGPSCAVADVSSEHAEIWSGTQNPHDLRKDIAHLLDRQPEQVHINRMEASGCYGR NCADDVSADAALLSQATGKPVRVQLMREQESGWEPKGTGQLIRVRGGLDQHRQVAAYELKTSYPSNNAVTLSLVLAGKVA NRADVQQMGDRTAIPQYEYPNMRVICQDAAPIVRASWMRGVSALPNVFAHESWIDELAWHAGQDPIAFRLQYLKDPRAVA LINALKKQANWQQGPSHRNPAPDTQAWVSGRGFAYARYFHSKFPGFGAAWAAWVCDLSVNRHSGQIKLDKIFVAHDCGRI INPAGVRHQVHGNILQSASRVLKEFVTFDASAVTSLDWGGYPILRFDELPQVDVQLLDYPDEPPMGAGESASVPSAAAIA NALFDALGVRLREVPFTPEQVLKALKQQASANAATRDKSL
Specific function: Probably Has No Xanthine Dehydrogenase Activity; However Deletion Results In Increased Adenine Sensitivity, Suggesting That This Protein Contributes To The Conversion Of Adenine To Guanine Nucleotides During Purine Salvage. [C]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789246, Length=151, Percent_Identity=30.4635761589404, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1786478, Length=145, Percent_Identity=28.9655172413793, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.3 [H]
Molecular weight: Translated: 82457; Mature: 82326
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLEITRRRLLQAGGVVMVSSLLPVSLNTLAAEPATLGNLPLDRVDSFIGLTADGRVTA CCCHHHHHHHHHHHCCCEEEHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEEE FNGHVDLGTGIRTALAQIVADEICVPFDQVTVILGDTQRTPDQGPTIASATIQVTSIPLR EECCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCHH QAAAQVRQLLLGLAARAFALPVDRLRAENGRVFAADKPHVSLSYGDLARGQNLQVALDKT HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCEEEECCCCCCCCCEEEEECHH VMLKSVTESRYVGKAVPRVDIPAKVTGQLTYVHDLRLPGMLHGRVVRPPYIGADSSAPLG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHCCCEECCCCCCCCCCCCCC SGLLSVDRASIAHLPGIVKLVVINDFIGIVAEREEQAIAAMRQLKTVWRPWSGLPDLSAD CCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GLHAALVANPKTDRVLRDDAGVDAALGSLHTEVNADYVWPYHQHASIGPSCAVADVSSEH CCEEEEEECCCCCCEECCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEECCCCHH AEIWSGTQNPHDLRKDIAHLLDRQPEQVHINRMEASGCYGRNCADDVSADAALLSQATGK HHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC PVRVQLMREQESGWEPKGTGQLIRVRGGLDQHRQVAAYELKTSYPSNNAVTLSLVLAGKV CEEEEEEEHHHCCCCCCCCCCEEEEECCCCHHHHEEEEEEECCCCCCCEEEEEEEEECCC ANRADVQQMGDRTAIPQYEYPNMRVICQDAAPIVRASWMRGVSALPNVFAHESWIDELAW CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAGQDPIAFRLQYLKDPRAVALINALKKQANWQQGPSHRNPAPDTQAWVSGRGFAYARYF HCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEHHHH HSKFPGFGAAWAAWVCDLSVNRHSGQIKLDKIFVAHDCGRIINPAGVRHQVHGNILQSAS HHCCCCCCHHHHHHHEECEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH RVLKEFVTFDASAVTSLDWGGYPILRFDELPQVDVQLLDYPDEPPMGAGESASVPSAAAI HHHHHHHHCCCHHHEECCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH ANALFDALGVRLREVPFTPEQVLKALKQQASANAATRDKSL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRLEITRRRLLQAGGVVMVSSLLPVSLNTLAAEPATLGNLPLDRVDSFIGLTADGRVTA CCHHHHHHHHHHHCCCEEEHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCEEEE FNGHVDLGTGIRTALAQIVADEICVPFDQVTVILGDTQRTPDQGPTIASATIQVTSIPLR EECCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCHH QAAAQVRQLLLGLAARAFALPVDRLRAENGRVFAADKPHVSLSYGDLARGQNLQVALDKT HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCEEEECCCCCCCCCEEEEECHH VMLKSVTESRYVGKAVPRVDIPAKVTGQLTYVHDLRLPGMLHGRVVRPPYIGADSSAPLG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHCCCEECCCCCCCCCCCCCC SGLLSVDRASIAHLPGIVKLVVINDFIGIVAEREEQAIAAMRQLKTVWRPWSGLPDLSAD CCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GLHAALVANPKTDRVLRDDAGVDAALGSLHTEVNADYVWPYHQHASIGPSCAVADVSSEH CCEEEEEECCCCCCEECCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEECCCCHH AEIWSGTQNPHDLRKDIAHLLDRQPEQVHINRMEASGCYGRNCADDVSADAALLSQATGK HHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC PVRVQLMREQESGWEPKGTGQLIRVRGGLDQHRQVAAYELKTSYPSNNAVTLSLVLAGKV CEEEEEEEHHHCCCCCCCCCCEEEEECCCCHHHHEEEEEEECCCCCCCEEEEEEEEECCC ANRADVQQMGDRTAIPQYEYPNMRVICQDAAPIVRASWMRGVSALPNVFAHESWIDELAW CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAGQDPIAFRLQYLKDPRAVALINALKKQANWQQGPSHRNPAPDTQAWVSGRGFAYARYF HCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEHHHH HSKFPGFGAAWAAWVCDLSVNRHSGQIKLDKIFVAHDCGRIINPAGVRHQVHGNILQSAS HHCCCCCCHHHHHHHEECEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH RVLKEFVTFDASAVTSLDWGGYPILRFDELPQVDVQLLDYPDEPPMGAGESASVPSAAAI HHHHHHHHCCCHHHEECCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH ANALFDALGVRLREVPFTPEQVLKALKQQASANAATRDKSL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2606906 [H]