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The map label for this gene is nahR [H]

Identifier: 157370699

GI number: 157370699

Start: 2693633

End: 2694529

Strand: Reverse

Name: nahR [H]

Synonym: Spro_2459

Alternate gene names: 157370699

Gene position: 2694529-2693633 (Counterclockwise)

Preceding gene: 157370701

Following gene: 157370695

Centisome position: 49.45

GC content: 56.97

Gene sequence:

>897_bases
ATGAATAATATCAGGCGCCTGGATCTCAATTTGTTGGTGACGTTGGACACCTTGCTGGCCGAGCACAATGTGACCCGGAC
GGCACAGCGATTAAACCTGTCGCAGCCTGCGGTCAGTGTGCATCTTGCCAAACTCAGGGATATCTTTCACGACCCTTTGT
TGATGCCGGGACCACGCGGCATGCGACCGACCGCGCGTGGTGACGAATTACGTGAACCACTGCGGCTGGCACTCGAGGCG
TTGGAGCTTGCGGTATCACCATCAGAACCTTTTGATCCCAGAGTGGCCGATAATACCTGGCGTGTGGCGGCATTCGACTA
CGGTGAGTCGACCATCGTTCAACCGGCGCTGATGGGGTTGCGGGCTGCGGCACCGCACAGCCGCCTGGCAGTGATAGAAA
CCGTGCCCTCACGCATTGCCAAACAGGCCGAGCAGGGCGAGATAGACCTGGCCTTTCATACTCGTGAAGGTTCACCGCCC
AACTTGCGTCAGCGCATTTTGTTTAGTGAACGCTATGTGCTGGTCGGGCGTGCGGGGCACCCTGGCTTGCAAAACCCGCC
GTCGCTGGCCCAGTTTTGCGAGTTGGAACATGTGATGGTATCACCGGACGGCGGAGGGTTTTTCGGCATCACTGACAAGG
TACTGGCAGAAGCCGGTTTAACCCGGCGAGTGGTGCTTTCCGTACCACATTTTCTGTTTGTGATGTCGGTGCTGGCAAAT
TCAGATCTGGTGGCGATGTTGCCATCGCGGCTGGTACGTAACAACAATGCGCTGCAGGTGGTTGAACCGCCGCTTCAAGT
GCCTGGGTTCGAAATGACCATGTTGTGGCACGAGCGTTCCCATCGTGATCCGGCACATCAATGGCTACGTGAGCATATTG
TTGCCTCGGTTGGCTGA

Upstream 100 bases:

>100_bases
AGTAAAACATTCATAGCGGGACCTCCATTAGTTGATGGAAGTCAGGGTAGGCGCTTATCAGGTATACTAGAAATGAATTT
CTAATATTACAGGTATTACC

Downstream 100 bases:

>100_bases
AGTTCAGGGATGCCTGCTGTATTTCAGTAATTTACCCTGAAGCAACAACATCAACGTACGCACAAACAGCAGGCCAATCA
GCACGTTGCTGAAGACAAAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNNIRRLDLNLLVTLDTLLAEHNVTRTAQRLNLSQPAVSVHLAKLRDIFHDPLLMPGPRGMRPTARGDELREPLRLALEA
LELAVSPSEPFDPRVADNTWRVAAFDYGESTIVQPALMGLRAAAPHSRLAVIETVPSRIAKQAEQGEIDLAFHTREGSPP
NLRQRILFSERYVLVGRAGHPGLQNPPSLAQFCELEHVMVSPDGGGFFGITDKVLAEAGLTRRVVLSVPHFLFVMSVLAN
SDLVAMLPSRLVRNNNALQVVEPPLQVPGFEMTMLWHERSHRDPAHQWLREHIVASVG

Sequences:

>Translated_298_residues
MNNIRRLDLNLLVTLDTLLAEHNVTRTAQRLNLSQPAVSVHLAKLRDIFHDPLLMPGPRGMRPTARGDELREPLRLALEA
LELAVSPSEPFDPRVADNTWRVAAFDYGESTIVQPALMGLRAAAPHSRLAVIETVPSRIAKQAEQGEIDLAFHTREGSPP
NLRQRILFSERYVLVGRAGHPGLQNPPSLAQFCELEHVMVSPDGGGFFGITDKVLAEAGLTRRVVLSVPHFLFVMSVLAN
SDLVAMLPSRLVRNNNALQVVEPPLQVPGFEMTMLWHERSHRDPAHQWLREHIVASVG
>Mature_298_residues
MNNIRRLDLNLLVTLDTLLAEHNVTRTAQRLNLSQPAVSVHLAKLRDIFHDPLLMPGPRGMRPTARGDELREPLRLALEA
LELAVSPSEPFDPRVADNTWRVAAFDYGESTIVQPALMGLRAAAPHSRLAVIETVPSRIAKQAEQGEIDLAFHTREGSPP
NLRQRILFSERYVLVGRAGHPGLQNPPSLAQFCELEHVMVSPDGGGFFGITDKVLAEAGLTRRVVLSVPHFLFVMSVLAN
SDLVAMLPSRLVRNNNALQVVEPPLQVPGFEMTMLWHERSHRDPAHQWLREHIVASVG

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=298, Percent_Identity=27.5167785234899, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI87081766, Length=286, Percent_Identity=26.2237762237762, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33101; Mature: 33101

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIRRLDLNLLVTLDTLLAEHNVTRTAQRLNLSQPAVSVHLAKLRDIFHDPLLMPGPRG
CCCCEEECHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
MRPTARGDELREPLRLALEALELAVSPSEPFDPRVADNTWRVAAFDYGESTIVQPALMGL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
RAAAPHSRLAVIETVPSRIAKQAEQGEIDLAFHTREGSPPNLRQRILFSERYVLVGRAGH
HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCC
PGLQNPPSLAQFCELEHVMVSPDGGGFFGITDKVLAEAGLTRRVVLSVPHFLFVMSVLAN
CCCCCCHHHHHHHCCCEEEECCCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
SDLVAMLPSRLVRNNNALQVVEPPLQVPGFEMTMLWHERSHRDPAHQWLREHIVASVG
CCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNIRRLDLNLLVTLDTLLAEHNVTRTAQRLNLSQPAVSVHLAKLRDIFHDPLLMPGPRG
CCCCEEECHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
MRPTARGDELREPLRLALEALELAVSPSEPFDPRVADNTWRVAAFDYGESTIVQPALMGL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
RAAAPHSRLAVIETVPSRIAKQAEQGEIDLAFHTREGSPPNLRQRILFSERYVLVGRAGH
HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCC
PGLQNPPSLAQFCELEHVMVSPDGGGFFGITDKVLAEAGLTRRVVLSVPHFLFVMSVLAN
CCCCCCHHHHHHHCCCEEEECCCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
SDLVAMLPSRLVRNNNALQVVEPPLQVPGFEMTMLWHERSHRDPAHQWLREHIVASVG
CCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]