| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370627
Identifier: 157370627
GI number: 157370627
Start: 2607072
End: 2608544
Strand: Direct
Name: 157370627
Synonym: Spro_2387
Alternate gene names: NA
Gene position: 2607072-2608544 (Clockwise)
Preceding gene: 157370613
Following gene: 157370633
Centisome position: 47.85
GC content: 48.68
Gene sequence:
>1473_bases ATGGACAATTCCCTAAATGGAAAGACCAGCGGTTGGGATGATGTTAATGATTTGCTGAATTATCATAATAGAGGAAATGG TTTAACCCTCAATAATAAGCCTTCTTTTGGTGTGGAAGAGGCTGGCAAGCAAATAGCGCGTAGTGAGCAGACCTGGAATG GCATTCATGTGACCGGCAAAGGTGCCACCGTCACTTATTCGTTCCCTGACTGGGATTATAATCAGAGTAATTTAAACTTC CGATTTGGCTCCAATAATCAAGATACCGGCCTTAGCGCCTTTACCGCAGAGCAAAAGGCCCAGGCCAAGCTTTCGCTGCA ATCCTGGGCTGATGTAGCTAACCTTACGTTTGTTGAAGTTGCCCCGGATCAAAAGTCCAATATTACCTTCGGAAATTATG AGGGTTCCGGCCAGGCTTATGCAATTAAGCCATTCAGCGGGGCGGGTAACGACTATCGAGGGCATAATACCGATGGTCAA AGCTGGTTCAACATCAATTACGATTACGCGGATCCCCGGGATGGGGTTTACGCCAATCTACACCCTGAGTTGGGCAACTA TGGCCGTTTGAGTATCACCCATGAACTGGGGCATACGTTGGGGCTGGATCATCCAGGAAAATATAATGCTGATGAAAACA ATCCACCCAACTACAGCATGGCGAATTACGCCGAGGATACGCGCCAATTCAGCGTAATGAGCTATTGGGATGAGTCCCTT ACCGGTGGTGATAACGGCGGTCATTTTGCCGCCGCGCCGCTGGTTGACGATATTGCCGCTATTCAATATCTCTATGGCGC CAATACCACTACGCGCACCGGGGATACGGTGTACGGGTTCAATTCTAATACCGGGCGGGATTTCTACACGCTGACGGACA GTAACCAGAAGCTGGTGTTCTCCGTCTGGGATGCCGGCGGCAACGATACGCTTGATTTCTCGGGCTATACGCAAAACCAA CGCATCAATTTGACGGAAGGCTCTTTCTCTGACGTCGGCGGGTTGAAGGGCAACGTTTCCATCGCCGTTGGTGCTGTGAT TGAAAATGCCATTGGTGGTTCAGGTAATGATGTGATTGTCGGCAATGATGCGGCCAATATTATCCATGGTGGTGCGGGTA ATGACGTTATCTACGGTGGCGGCGGGCAGGATCAGTTATTCGGTGGCAGCGGTAAAGATATCTTTGTTTTCTCTGCGGTG AGTGATTCGTCGTTCAAATCACCGGATAAAATCCTGGACTTTGAAACCGGCATCGACAAAATCGATCTGTCCTTCTTTAA TCATGGCGACAATGGCGCAGGATTTATTCATTTCGTCGACGCGTTTAGCGGGCAGGCGGGGGAGGCATTGCTAACCTATG ACTCACAAAGTAATTTAAGTGAGTTGGCGCTAAATATAAATGGCCAGGCGGCTCCGGATTTTCTGGTTAATATTGTCGGG CAAGCAAATACTGCCACTGACTTTATTGTTTAA
Upstream 100 bases:
>100_bases ATACTAGCATTTAAATGCTGCGATATGATGTTGCGGTAATTCTATATATCGAAATTTTATTTCTATATAACGGAAATGAA TTAACCTACTGGAGATGGAT
Downstream 100 bases:
>100_bases ATCAGTCACGGTGGGTTATACCCACCGTTTTTAACGCTCTTTTATTATTCTGTACCACCTTGGTAAGTACAGAGGTAAAC AAAGTCACCGCCTGCTCCAG
Product: serralysin
Products: NA
Alternate protein names: Extracellular metalloproteinase; Zinc proteinase [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MDNSLNGKTSGWDDVNDLLNYHNRGNGLTLNNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNF RFGSNNQDTGLSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGNDYRGHNTDGQ SWFNINYDYADPRDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYNADENNPPNYSMANYAEDTRQFSVMSYWDESL TGGDNGGHFAAAPLVDDIAAIQYLYGANTTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFSGYTQNQ RINLTEGSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQLFGGSGKDIFVFSAV SDSSFKSPDKILDFETGIDKIDLSFFNHGDNGAGFIHFVDAFSGQAGEALLTYDSQSNLSELALNINGQAAPDFLVNIVG QANTATDFIV
Sequences:
>Translated_490_residues MDNSLNGKTSGWDDVNDLLNYHNRGNGLTLNNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNF RFGSNNQDTGLSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGNDYRGHNTDGQ SWFNINYDYADPRDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYNADENNPPNYSMANYAEDTRQFSVMSYWDESL TGGDNGGHFAAAPLVDDIAAIQYLYGANTTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFSGYTQNQ RINLTEGSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQLFGGSGKDIFVFSAV SDSSFKSPDKILDFETGIDKIDLSFFNHGDNGAGFIHFVDAFSGQAGEALLTYDSQSNLSELALNINGQAAPDFLVNIVG QANTATDFIV >Mature_490_residues MDNSLNGKTSGWDDVNDLLNYHNRGNGLTLNNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNF RFGSNNQDTGLSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGNDYRGHNTDGQ SWFNINYDYADPRDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYNADENNPPNYSMANYAEDTRQFSVMSYWDESL TGGDNGGHFAAAPLVDDIAAIQYLYGANTTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFSGYTQNQ RINLTEGSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQLFGGSGKDIFVFSAV SDSSFKSPDKILDFETGIDKIDLSFFNHGDNGAGFIHFVDAFSGQAGEALLTYDSQSNLSELALNINGQAAPDFLVNIVG QANTATDFIV
Specific function: Has insecticidal activity against the locust M.palpalis. When administered orally to locusts at a low dose it causes them to lie on their sides exhibiting sporadic limb movements and muscular twitching, followed by full recovery. When administered at high
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR001818 - InterPro: IPR016294 - InterPro: IPR013858 - InterPro: IPR006026 - InterPro: IPR011049 [H]
Pfam domain/function: PF00353 HemolysinCabind; PF00413 Peptidase_M10; PF08548 Peptidase_M10_C [H]
EC number: =3.4.24.40 [H]
Molecular weight: Translated: 52539; Mature: 52539
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00142 ZINC_PROTEASE ; PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSLNGKTSGWDDVNDLLNYHNRGNGLTLNNKPSFGVEEAGKQIARSEQTWNGIHVTGK CCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEC GATVTYSFPDWDYNQSNLNFRFGSNNQDTGLSAFTAEQKAQAKLSLQSWADVANLTFVEV CCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHEEEHHHHHHHHCEEEEEE APDQKSNITFGNYEGSGQAYAIKPFSGAGNDYRGHNTDGQSWFNINYDYADPRDGVYANL CCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE HPELGNYGRLSITHELGHTLGLDHPGKYNADENNPPNYSMANYAEDTRQFSVMSYWDESL CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEHHHHHC TGGDNGGHFAAAPLVDDIAAIQYLYGANTTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVF CCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEE SVWDAGGNDTLDFSGYTQNQRINLTEGSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIV EEECCCCCCEEEECCCCCCCEEEECCCCCHHCCCCCCCEEEEEEEHHHHHCCCCCCEEEE GNDAANIIHGGAGNDVIYGGGGQDQLFGGSGKDIFVFSAVSDSSFKSPDKILDFETGIDK CCCHHHEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHEEECCCCCCE IDLSFFNHGDNGAGFIHFVDAFSGQAGEALLTYDSQSNLSELALNINGQAAPDFLVNIVG EEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHEEEC QANTATDFIV CCCCCCCCCC >Mature Secondary Structure MDNSLNGKTSGWDDVNDLLNYHNRGNGLTLNNKPSFGVEEAGKQIARSEQTWNGIHVTGK CCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEC GATVTYSFPDWDYNQSNLNFRFGSNNQDTGLSAFTAEQKAQAKLSLQSWADVANLTFVEV CCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHEEEHHHHHHHHCEEEEEE APDQKSNITFGNYEGSGQAYAIKPFSGAGNDYRGHNTDGQSWFNINYDYADPRDGVYANL CCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE HPELGNYGRLSITHELGHTLGLDHPGKYNADENNPPNYSMANYAEDTRQFSVMSYWDESL CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEHHHHHC TGGDNGGHFAAAPLVDDIAAIQYLYGANTTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVF CCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCCEEEE SVWDAGGNDTLDFSGYTQNQRINLTEGSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIV EEECCCCCCEEEECCCCCCCEEEECCCCCHHCCCCCCCEEEEEEEHHHHHCCCCCCEEEE GNDAANIIHGGAGNDVIYGGGGQDQLFGGSGKDIFVFSAVSDSSFKSPDKILDFETGIDK CCCHHHEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHEEECCCCCCE IDLSFFNHGDNGAGFIHFVDAFSGQAGEALLTYDSQSNLSELALNINGQAAPDFLVNIVG EEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHEEEC QANTATDFIV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2274043; 8089845; 7752231 [H]