Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 157370626

GI number: 157370626

Start: 2606268

End: 2606762

Strand: Reverse

Name: yqhA [C]

Synonym: Spro_2386

Alternate gene names: 157370626

Gene position: 2606762-2606268 (Counterclockwise)

Preceding gene: 157370628

Following gene: 157370625

Centisome position: 47.84

GC content: 50.1

Gene sequence:

>495_bases
ATGGAACGCTTTCTAGAAAATGCCATGTACGCCTCTCGCTGGCTACTTGCCCCGGTTTACTTCGGCCTGTCGCTGGCCTT
GCTGGCGCTGTCGATAAAATTCTTCCAGGAGATCATCCATGTTCTGCCGAACATTTTCGCCATAGCCGAGGCGGATTTGG
TTCTGACGCTGCTGTCGTTGATCGATATGGCGCTGGTAGGCGGACTTCTGGTAATGGTGATGTTCTCTGGCTACGAGAAC
TTTGTTTCGCAACTGGATATCAGCGACGACAAAGAAAAGTTGAGCTGGTTGGGCAAAATGGACTCCACATCGTTGAAGAG
CAAAGTGGCCGCGTCAATTGTCGCCATCTCTTCCATCCATCTGCTGCGAGTGTTTATGGATGCCAAAAACGTGCCGGACA
ATAAGCTGATGTGGTATGTGATCATCCACCTCACCTTTGTGCTCTCCGCCTTTGTGATGGGCTACCTCGATAAACTGACA
CGCGATAAAAAATGA

Upstream 100 bases:

>100_bases
ATCCAGGGCTGCTCCCCTCAATCGAGCCAAGTCCACTTGCCATTTGCCGGGCCTGTTGCGCTATACTGTGGCCCACTTTT
TGTAACGAACTCAGTTGACT

Downstream 100 bases:

>100_bases
TCCTCCGTTAGCCGTCACCCTCTGCTGACGGCTAACCCCCCCCCGTTTAAACCTGCTATTAATCAATGAATTGAGTCGAA
TTTTAAACCTCTTCTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MERFLENAMYASRWLLAPVYFGLSLALLALSIKFFQEIIHVLPNIFAIAEADLVLTLLSLIDMALVGGLLVMVMFSGYEN
FVSQLDISDDKEKLSWLGKMDSTSLKSKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKLT
RDKK

Sequences:

>Translated_164_residues
MERFLENAMYASRWLLAPVYFGLSLALLALSIKFFQEIIHVLPNIFAIAEADLVLTLLSLIDMALVGGLLVMVMFSGYEN
FVSQLDISDDKEKLSWLGKMDSTSLKSKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKLT
RDKK
>Mature_164_residues
MERFLENAMYASRWLLAPVYFGLSLALLALSIKFFQEIIHVLPNIFAIAEADLVLTLLSLIDMALVGGLLVMVMFSGYEN
FVSQLDISDDKEKLSWLGKMDSTSLKSKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKLT
RDKK

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=161, Percent_Identity=90.0621118012422, Blast_Score=285, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2386_SERP5 (A8GEE7)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478615.1
- STRING:   A8GEE7
- GeneID:   5602552
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2386
- eggNOG:   COG2862
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- BioCyc:   SPRO399741:SPRO_2386-MONOMER
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18497; Mature: 18497

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2586c398)-; HASH(0x258dfdc0)-; HASH(0x25630944)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLALLALSIKFFQEIIHVLPNIFAIAEADLVLTLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMALVGGLLVMVMFSGYENFVSQLDISDDKEKLSWLGKMDSTSLKSKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKLTRDKK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MERFLENAMYASRWLLAPVYFGLSLALLALSIKFFQEIIHVLPNIFAIAEADLVLTLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMALVGGLLVMVMFSGYENFVSQLDISDDKEKLSWLGKMDSTSLKSKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKLTRDKK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA