| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370628
Identifier: 157370628
GI number: 157370628
Start: 2608589
End: 2610058
Strand: Reverse
Name: 157370628
Synonym: Spro_2388
Alternate gene names: NA
Gene position: 2610058-2608589 (Counterclockwise)
Preceding gene: 157370629
Following gene: 157370626
Centisome position: 47.9
GC content: 40.75
Gene sequence:
>1470_bases ATGAAAATTGAATCATCCAAGGTTGAAGGTTTGTTTAGCTCATCTTTTACTCGTGTTAATGCTGTCCCTCTCCCGAGCGA TACTTTACCCGGCGTAGGTATTATTGGTTGTGGCTACAATCCATTTTTAGCCTATGCAGATGCTTCTGCTGTCCTGCATC CTATTCTCGACTGGTCAAAATCTCAGTTTAACGAAATTACTATGAACGGTCAGCAATATCAATTACCTGATGTGCTTCAG GCGGTATGGCTCAGTAACCAGTCTTACGCATCGGTAACGGGGAAATCGCTCCAAAGTTATTTAACTGAATTGGCTAACAG TATTAAAGTAAGTGGTAACTATGGCTTTTTTAGTGCCTCAGCCACAAATGAATTTAGCGACAGTTCATTGAGAAAGTCAG AAAATGAGTTTAGTCGATGTCAGCAGTCATTTGATTTGTGGTCAATTAGTATCCCAGCCGATATTGCAAGGTTGCAAAAC TATGTTTCAGATGATTTTATAAAACTGATTAATGCAATAAATCCAGAAAGTAAAGATTCAATAGCCACTGTATTCAACGT TTATGGCAGCCATGTTCTAATGAGTGGTGTTATGGGCGGGAAAGCTCACGTATCCGCCTCAGCAAACAAGTTAACACTCA CCCAAAAATTTGAGATGAGTACGATTGTTCAGGCTAAATACGAACAACTAACATCACAACTTAGCGTCGAAGACAAACTT AAGTATTCAGAAGCCTTCGATAGTTTCAGCGAAAGCGGTAGTTACACATATGATATTCTAGGCGGTAGCCCTTCTTTAGG GGCGCTTGTTTTTAAAAATAACTCGCAAGGTAGTAGTGACGATAATTTAAAAAATTGGATACAGTCTATTTCCAGTATGC CGGTGTTGACCAAGTTCATAGACCAAACCTCGTTAATGCCTGTATGGCTATTGTGTGAAGACAAGACAAAAGCCGATGCA TTAAAAAAATATTACGATAATACATGGTCAAAATCGCAGATGGCCGTTGCCAGTCTCAGAGCAAACTACATCGACGAGCT GACATTTGTCCTGGGTGACAACTCAGATATCCCTGCTCCAGTCGGATACACTAAAGTTCCGATTGATCTTAATTCTGATG CTGGGGGTAAATATGTCTATCTTTGCTATCATGAAGCGCAGTTCACGCCAGTAAATGGCAAACAGCCGATTGTTGATATC CAAGTGCTCTATGGTAGCCAGATGCCAGCGCCTGGATATATAAAAATTGATGTTGATTTGAATAGCGGTGCTGGCGGGGA ATTTGTCTACCTTTCATACAAAAAGGGAGAACCAACGTCGTCCGATGTAATTAATAAAATCACCGCTGTATATGGAAAAA ATGAGTACGTCCCAACCCCATATGGATATAAACAAATTAGCGGTGACCTTAATGCTGGAGCAGGCGGTGACTTTGTTTAC CTCTGTACTTACCAAGGTGGTACAGAATAA
Upstream 100 bases:
>100_bases CACAAATAAACCCGGAGGTGAAATATAACGTTAACTTTTCAACGCAAATAATTTAAATTAGATTTTTCATGAGTTTAACC AAGCATTAAGAGGATTTAAA
Downstream 100 bases:
>100_bases TAAAAGAGCGTTAAAAACGGTGGGTATAACCCACCGTGACTGATTTAAACAATAAAGTCAGTGGCAGTATTTGCTTGCCC GACAATATTAACCAGAAAAT
Product: membrane attack complex component/perforin/complement C9
Products: NA
Alternate protein names: Perforin; Curculin Domain Protein Lectin
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MKIESSKVEGLFSSSFTRVNAVPLPSDTLPGVGIIGCGYNPFLAYADASAVLHPILDWSKSQFNEITMNGQQYQLPDVLQ AVWLSNQSYASVTGKSLQSYLTELANSIKVSGNYGFFSASATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQN YVSDDFIKLINAINPESKDSIATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKL KYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFIDQTSLMPVWLLCEDKTKADA LKKYYDNTWSKSQMAVASLRANYIDELTFVLGDNSDIPAPVGYTKVPIDLNSDAGGKYVYLCYHEAQFTPVNGKQPIVDI QVLYGSQMPAPGYIKIDVDLNSGAGGEFVYLSYKKGEPTSSDVINKITAVYGKNEYVPTPYGYKQISGDLNAGAGGDFVY LCTYQGGTE
Sequences:
>Translated_489_residues MKIESSKVEGLFSSSFTRVNAVPLPSDTLPGVGIIGCGYNPFLAYADASAVLHPILDWSKSQFNEITMNGQQYQLPDVLQ AVWLSNQSYASVTGKSLQSYLTELANSIKVSGNYGFFSASATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQN YVSDDFIKLINAINPESKDSIATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKL KYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFIDQTSLMPVWLLCEDKTKADA LKKYYDNTWSKSQMAVASLRANYIDELTFVLGDNSDIPAPVGYTKVPIDLNSDAGGKYVYLCYHEAQFTPVNGKQPIVDI QVLYGSQMPAPGYIKIDVDLNSGAGGEFVYLSYKKGEPTSSDVINKITAVYGKNEYVPTPYGYKQISGDLNAGAGGDFVY LCTYQGGTE >Mature_489_residues MKIESSKVEGLFSSSFTRVNAVPLPSDTLPGVGIIGCGYNPFLAYADASAVLHPILDWSKSQFNEITMNGQQYQLPDVLQ AVWLSNQSYASVTGKSLQSYLTELANSIKVSGNYGFFSASATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQN YVSDDFIKLINAINPESKDSIATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKL KYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFIDQTSLMPVWLLCEDKTKADA LKKYYDNTWSKSQMAVASLRANYIDELTFVLGDNSDIPAPVGYTKVPIDLNSDAGGKYVYLCYHEAQFTPVNGKQPIVDI QVLYGSQMPAPGYIKIDVDLNSGAGGEFVYLSYKKGEPTSSDVINKITAVYGKNEYVPTPYGYKQISGDLNAGAGGDFVY LCTYQGGTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53414; Mature: 53414
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIESSKVEGLFSSSFTRVNAVPLPSDTLPGVGIIGCGYNPFLAYADASAVLHPILDWSK CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHCCH SQFNEITMNGQQYQLPDVLQAVWLSNQSYASVTGKSLQSYLTELANSIKVSGNYGFFSAS HHCCEEEECCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECC ATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQNYVSDDFIKLINAINPESKDS CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHH IATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKL HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHH KYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFI HHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHH DQTSLMPVWLLCEDKTKADALKKYYDNTWSKSQMAVASLRANYIDELTFVLGDNSDIPAP CCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCC VGYTKVPIDLNSDAGGKYVYLCYHEAQFTPVNGKQPIVDIQVLYGSQMPAPGYIKIDVDL CCCEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEE NSGAGGEFVYLSYKKGEPTSSDVINKITAVYGKNEYVPTPYGYKQISGDLNAGAGGDFVY CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEE LCTYQGGTE EEEECCCCC >Mature Secondary Structure MKIESSKVEGLFSSSFTRVNAVPLPSDTLPGVGIIGCGYNPFLAYADASAVLHPILDWSK CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHCCH SQFNEITMNGQQYQLPDVLQAVWLSNQSYASVTGKSLQSYLTELANSIKVSGNYGFFSAS HHCCEEEECCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECC ATNEFSDSSLRKSENEFSRCQQSFDLWSISIPADIARLQNYVSDDFIKLINAINPESKDS CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHH IATVFNVYGSHVLMSGVMGGKAHVSASANKLTLTQKFEMSTIVQAKYEQLTSQLSVEDKL HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHH KYSEAFDSFSESGSYTYDILGGSPSLGALVFKNNSQGSSDDNLKNWIQSISSMPVLTKFI HHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHH DQTSLMPVWLLCEDKTKADALKKYYDNTWSKSQMAVASLRANYIDELTFVLGDNSDIPAP CCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCC VGYTKVPIDLNSDAGGKYVYLCYHEAQFTPVNGKQPIVDIQVLYGSQMPAPGYIKIDVDL CCCEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEE NSGAGGEFVYLSYKKGEPTSSDVINKITAVYGKNEYVPTPYGYKQISGDLNAGAGGDFVY CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEE LCTYQGGTE EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA