| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fabZ [H]
Identifier: 157370625
GI number: 157370625
Start: 2605560
End: 2606015
Strand: Reverse
Name: fabZ [H]
Synonym: Spro_2385
Alternate gene names: 157370625
Gene position: 2606015-2605560 (Counterclockwise)
Preceding gene: 157370626
Following gene: 157370624
Centisome position: 47.83
GC content: 56.8
Gene sequence:
>456_bases ATGCCGCTCAATGGTAAACCACTACAGTTTCAGGATGTTCAATCTATCCTGCCGCACCGCTTCCCCTGTCTGCTGGTTGA CCGCATTCTGCCTGACGGCACCTCCGTTGCCGAAGGCCGCTTAAGTGCCATCAAAAATATCACTGCCAACGAACCGACCT TCTGGACTGGCCACCACCAGACCACGGTGTTTCCCGGCATATTAATGGTGGAGGCACTGGCACAAACCACCGGCTTGTTG GCGCATTACTTTCTCAGCCCGCTATTACCCGGCGAACATTACTATTTTGCCGCCATTCATCACGCTCGCTTCTATCGCTC GGCCCGGCCCGGCGATCAGCTTCGCATGGATGTCGCCTTTGTCCGACAGCGCTCCGGCCTTGCCCGCTTTACCGGTCGTG CTACGGTAAATGGCCGCCGCATCTGTACCGCCGAGTTTATGTGCGCTCGTAAGTAG
Upstream 100 bases:
>100_bases TGCATCCAATGATAATAACATTATAATGTTATTACACTTCGACAGGCACAGATGCCGGCACAAGCTGAGCTTTGTCCCGC TGACAGGACCCTAATCAATC
Downstream 100 bases:
>100_bases AACCGCCGTTTTTGATGGAGGCTTAAAGAAATAACTATGTCTATGGTTGATAAATTGCTCAATAGCCTGGATTTTTCTCC TCGCGGTCAGGTGATTGCTC
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPLNGKPLQFQDVQSILPHRFPCLLVDRILPDGTSVAEGRLSAIKNITANEPTFWTGHHQTTVFPGILMVEALAQTTGLL AHYFLSPLLPGEHYYFAAIHHARFYRSARPGDQLRMDVAFVRQRSGLARFTGRATVNGRRICTAEFMCARK
Sequences:
>Translated_151_residues MPLNGKPLQFQDVQSILPHRFPCLLVDRILPDGTSVAEGRLSAIKNITANEPTFWTGHHQTTVFPGILMVEALAQTTGLL AHYFLSPLLPGEHYYFAAIHHARFYRSARPGDQLRMDVAFVRQRSGLARFTGRATVNGRRICTAEFMCARK >Mature_150_residues PLNGKPLQFQDVQSILPHRFPCLLVDRILPDGTSVAEGRLSAIKNITANEPTFWTGHHQTTVFPGILMVEALAQTTGLLA HYFLSPLLPGEHYYFAAIHHARFYRSARPGDQLRMDVAFVRQRSGLARFTGRATVNGRRICTAEFMCARK
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=152, Percent_Identity=50, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 16964; Mature: 16833
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNGKPLQFQDVQSILPHRFPCLLVDRILPDGTSVAEGRLSAIKNITANEPTFWTGHHQ CCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCC TTVFPGILMVEALAQTTGLLAHYFLSPLLPGEHYYFAAIHHARFYRSARPGDQLRMDVAF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHH VRQRSGLARFTGRATVNGRRICTAEFMCARK HHHHCCCHHHCCCEECCCCEEEHHHHHCCCC >Mature Secondary Structure PLNGKPLQFQDVQSILPHRFPCLLVDRILPDGTSVAEGRLSAIKNITANEPTFWTGHHQ CCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCC TTVFPGILMVEALAQTTGLLAHYFLSPLLPGEHYYFAAIHHARFYRSARPGDQLRMDVAF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHH VRQRSGLARFTGRATVNGRRICTAEFMCARK HHHHCCCHHHCCCEECCCCEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA