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The map label for this gene is speE [H]

Identifier: 157370624

GI number: 157370624

Start: 2604735

End: 2605523

Strand: Reverse

Name: speE [H]

Synonym: Spro_2384

Alternate gene names: 157370624

Gene position: 2605523-2604735 (Counterclockwise)

Preceding gene: 157370625

Following gene: 157370623

Centisome position: 47.82

GC content: 53.36

Gene sequence:

>789_bases
ATGTCTATGGTTGATAAATTGCTCAATAGCCTGGATTTTTCTCCTCGCGGTCAGGTGATTGCTCGCGAGCAAGACCACTG
CGGTGAAATTATTGTCTCTGACCACAAGGGCTACCGAACCCTGCGTTTTGACGGCATCTGCGAACAAAGCAAAATGTGCA
TCGATGCGCCACAGGTTCCGGTTCACAACTACATCAAAACCATGCTGATGGCCGTGGCCTGGCAGCCGCCTTCGGCGGTG
CTGATCCTGGGATTGGGCGGCGGCGGTCTGGTACGGGCATTACATGCCTATGACCCCAATATGCTGCTGGAAGTGGTGGA
ACTGCGCGAAGCGGTGGTCTCTGTTGCGCAAAGTTATTTCACCTTGCCCAGCGACGACACGGTTATCTTGCGCGTTGCTG
ACGCGGGCGATTTTTTACGTGCCCCCATAACCCGGCAGTATGATCTGATTTTTTCCGATCTCTACAGCGCCTTCAGCATG
GATCCGCAACAGGGTACGCAAAGCTTTCTTCAGCGGTGTGCCGGACGGCTTTCACCACAAGGTTGGTTGGTGCTGAACTA
CCATGAAGTGCCCGATGAAGATTCACTGCTGTACCACAGTTTGCACCGGGTGTTTAACAGCGTGTTGTATTGTGTTGCCC
CCAGCGGCAACGTGATTATCTATGCCGCATTAGCTGAAATCGAGACGCCGCTAAATCTGCTGCGTCGCCTTAGTGCCGAA
GTCGGGCCGAGTTTTAACTGTGACCTCGGCTACCTGTCACGCAAGATTGAACGCTTGCACTTTAGCTAA

Upstream 100 bases:

>100_bases
CGGTCGTGCTACGGTAAATGGCCGCCGCATCTGTACCGCCGAGTTTATGTGCGCTCGTAAGTAGAACCGCCGTTTTTGAT
GGAGGCTTAAAGAAATAACT

Downstream 100 bases:

>100_bases
GTCGGCATGGTCATTTCACTATTATCATTTGATTATTATTCTCTGGAGTCACCATCATGGAAAAGAAAACGGCGCGCCTG
ACCGTACTCATTGATCCTGA

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSMVDKLLNSLDFSPRGQVIAREQDHCGEIIVSDHKGYRTLRFDGICEQSKMCIDAPQVPVHNYIKTMLMAVAWQPPSAV
LILGLGGGGLVRALHAYDPNMLLEVVELREAVVSVAQSYFTLPSDDTVILRVADAGDFLRAPITRQYDLIFSDLYSAFSM
DPQQGTQSFLQRCAGRLSPQGWLVLNYHEVPDEDSLLYHSLHRVFNSVLYCVAPSGNVIIYAALAEIETPLNLLRRLSAE
VGPSFNCDLGYLSRKIERLHFS

Sequences:

>Translated_262_residues
MSMVDKLLNSLDFSPRGQVIAREQDHCGEIIVSDHKGYRTLRFDGICEQSKMCIDAPQVPVHNYIKTMLMAVAWQPPSAV
LILGLGGGGLVRALHAYDPNMLLEVVELREAVVSVAQSYFTLPSDDTVILRVADAGDFLRAPITRQYDLIFSDLYSAFSM
DPQQGTQSFLQRCAGRLSPQGWLVLNYHEVPDEDSLLYHSLHRVFNSVLYCVAPSGNVIIYAALAEIETPLNLLRRLSAE
VGPSFNCDLGYLSRKIERLHFS
>Mature_261_residues
SMVDKLLNSLDFSPRGQVIAREQDHCGEIIVSDHKGYRTLRFDGICEQSKMCIDAPQVPVHNYIKTMLMAVAWQPPSAVL
ILGLGGGGLVRALHAYDPNMLLEVVELREAVVSVAQSYFTLPSDDTVILRVADAGDFLRAPITRQYDLIFSDLYSAFSMD
PQQGTQSFLQRCAGRLSPQGWLVLNYHEVPDEDSLLYHSLHRVFNSVLYCVAPSGNVIIYAALAEIETPLNLLRRLSAEV
GPSFNCDLGYLSRKIERLHFS

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 29247; Mature: 29116

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMVDKLLNSLDFSPRGQVIAREQDHCGEIIVSDHKGYRTLRFDGICEQSKMCIDAPQVP
CCHHHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECCCCCC
VHNYIKTMLMAVAWQPPSAVLILGLGGGGLVRALHAYDPNMLLEVVELREAVVSVAQSYF
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
TLPSDDTVILRVADAGDFLRAPITRQYDLIFSDLYSAFSMDPQQGTQSFLQRCAGRLSPQ
CCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
GWLVLNYHEVPDEDSLLYHSLHRVFNSVLYCVAPSGNVIIYAALAEIETPLNLLRRLSAE
CEEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH
VGPSFNCDLGYLSRKIERLHFS
HCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMVDKLLNSLDFSPRGQVIAREQDHCGEIIVSDHKGYRTLRFDGICEQSKMCIDAPQVP
CHHHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECCCCCC
VHNYIKTMLMAVAWQPPSAVLILGLGGGGLVRALHAYDPNMLLEVVELREAVVSVAQSYF
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
TLPSDDTVILRVADAGDFLRAPITRQYDLIFSDLYSAFSMDPQQGTQSFLQRCAGRLSPQ
CCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
GWLVLNYHEVPDEDSLLYHSLHRVFNSVLYCVAPSGNVIIYAALAEIETPLNLLRRLSAE
CEEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH
VGPSFNCDLGYLSRKIERLHFS
HCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]