Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 157370607

GI number: 157370607

Start: 2582084

End: 2583520

Strand: Direct

Name: yebQ [H]

Synonym: Spro_2367

Alternate gene names: 157370607

Gene position: 2582084-2583520 (Clockwise)

Preceding gene: 157370600

Following gene: 157370611

Centisome position: 47.39

GC content: 59.85

Gene sequence:

>1437_bases
ATGAAGCCAATTACTCAGCATACCGCCCCCAGCCCCCATATCGGTGGGATCCTCGCCAGCCTTTCCTTGTCCATGCTGGT
TTCCTCACTGGGTGCCAGTATCGCCAACATCGGTTTGCCCTCGCTGGCGCTGGCGTTTAACACCTCGTTTCAGGCGGTGC
AGTGGGTAATGATCGTCTATCTGCTGACCATTACCACCTCCATCATCGCGGTCGGGCGTCTGGGCGACCGCATTGGCCGA
CGTCGCCTGTTGCTGCTGGGGATTGGCCTGTTCAGCGTCGCTTCCGCACTCTGTGCCATGGCACCTGATATCTGGCTGCT
GCTCTCCGCCCGTATTGCACAAGGGCTGGGAGCGGCAGTGATGATGGCGATGACCATGGCGCTGGTCGGTGAGACGTTGG
GGAAAGAAAATACCGGCCGTGCCATGGGGCTGCTTGGCAGCATGTCGGCGATTGGCACCGCGCTGGGTCCTTCGCTTGGT
GGCGCATTGATTTTTGGCTTTGGCTGGCGTGCGGTGTTTTTGGTTACCTTTCCGCTGGGCCTGCTGGCCTTGCTGCTGGC
TTACCGTTATCTGCCGCACGGTCGGCCGCAACCGCAATCGGAGAGCGGCAGGTTTGATTTGCCCGGCACTTTGCTGCTTG
GTGTGACACTGGCCTGCTATGCACTGTCGATGACGCTGGGGCATGGTGATTTCGGTGCCATCAATTTGCTGTTGTTGCTG
TGCGCGGGGCTGGGGATCGGACTGTTTGTGCGGCTGGAAAATACCACGGCATCGCCTTTGATACAGCCGGCACTGTTCCG
CCAGCCAGGGCTGAGCAGTGGGTTAATGATGAGCGCACTGGTGATGACGGTGATGATGACGTCGCTGGTAGTGGGGCCGT
TTTACCTGACGCGCGGTTTGGGCTTGACGGTGGGACAGGCCGGGTTGGCGATGTCAGCCGGGCCGCTGGTGGCCGCTTTG
TTCGGTGTGCCTGCCGGCCGACTGGTGGATCGCCTGGGAGCGGCAAGAACAACTGCCGTGGGGCTGGCGATCATGGTCGT
CGGCGCGGGAGTAATGTCGATGATGTCAATCAGGCAGGGTGTTTTCGGCTACGTGACCCCTCTTTGCCTGATTACCCTGG
GTTACTCGCTATTTCAGGTGGCCAATAACACGGCATTGATGAAGCATGCGGCACCTGAGCAGCGCGGGGTGATCTCCGGC
ATGATCAATCTCTCACGCAATCTGGGTTTGATCACCGGTGCTTCCGCCATGGGCGCGTTGTTTATGCTGGCGGCGAACGC
CGACGATATCAAGTTGGCGACCGCAGAGGCGATATCCAATGGCATGCGAGTGACCTATCTGGCGGCTGGCGTATTGGTGG
CCATTGCGCTGGTAATGACCATCAGGAGCCGTGCCGCCATTAAACGCGACGCTGATTACAGCAGGTCACCCCGGTAG

Upstream 100 bases:

>100_bases
TGATATGGCGTAGCATGCACTAATAAACTGCATATGCTGCGTCTTCCGCCAGGTTATCGGCTGGCATAGGCTACTGACAG
GTTCTTTCAGGAGTCAGACT

Downstream 100 bases:

>100_bases
GCGATATGGATCTTGTTGCCGTCGGGATCACGCAGGTAGGCACCAAAATAACCTTTGCCATAATGAGCGCGTTCGCCGGC
TTCACCTTCCGAAGTCCCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKPITQHTAPSPHIGGILASLSLSMLVSSLGASIANIGLPSLALAFNTSFQAVQWVMIVYLLTITTSIIAVGRLGDRIGR
RRLLLLGIGLFSVASALCAMAPDIWLLLSARIAQGLGAAVMMAMTMALVGETLGKENTGRAMGLLGSMSAIGTALGPSLG
GALIFGFGWRAVFLVTFPLGLLALLLAYRYLPHGRPQPQSESGRFDLPGTLLLGVTLACYALSMTLGHGDFGAINLLLLL
CAGLGIGLFVRLENTTASPLIQPALFRQPGLSSGLMMSALVMTVMMTSLVVGPFYLTRGLGLTVGQAGLAMSAGPLVAAL
FGVPAGRLVDRLGAARTTAVGLAIMVVGAGVMSMMSIRQGVFGYVTPLCLITLGYSLFQVANNTALMKHAAPEQRGVISG
MINLSRNLGLITGASAMGALFMLAANADDIKLATAEAISNGMRVTYLAAGVLVAIALVMTIRSRAAIKRDADYSRSPR

Sequences:

>Translated_478_residues
MKPITQHTAPSPHIGGILASLSLSMLVSSLGASIANIGLPSLALAFNTSFQAVQWVMIVYLLTITTSIIAVGRLGDRIGR
RRLLLLGIGLFSVASALCAMAPDIWLLLSARIAQGLGAAVMMAMTMALVGETLGKENTGRAMGLLGSMSAIGTALGPSLG
GALIFGFGWRAVFLVTFPLGLLALLLAYRYLPHGRPQPQSESGRFDLPGTLLLGVTLACYALSMTLGHGDFGAINLLLLL
CAGLGIGLFVRLENTTASPLIQPALFRQPGLSSGLMMSALVMTVMMTSLVVGPFYLTRGLGLTVGQAGLAMSAGPLVAAL
FGVPAGRLVDRLGAARTTAVGLAIMVVGAGVMSMMSIRQGVFGYVTPLCLITLGYSLFQVANNTALMKHAAPEQRGVISG
MINLSRNLGLITGASAMGALFMLAANADDIKLATAEAISNGMRVTYLAAGVLVAIALVMTIRSRAAIKRDADYSRSPR
>Mature_478_residues
MKPITQHTAPSPHIGGILASLSLSMLVSSLGASIANIGLPSLALAFNTSFQAVQWVMIVYLLTITTSIIAVGRLGDRIGR
RRLLLLGIGLFSVASALCAMAPDIWLLLSARIAQGLGAAVMMAMTMALVGETLGKENTGRAMGLLGSMSAIGTALGPSLG
GALIFGFGWRAVFLVTFPLGLLALLLAYRYLPHGRPQPQSESGRFDLPGTLLLGVTLACYALSMTLGHGDFGAINLLLLL
CAGLGIGLFVRLENTTASPLIQPALFRQPGLSSGLMMSALVMTVMMTSLVVGPFYLTRGLGLTVGQAGLAMSAGPLVAAL
FGVPAGRLVDRLGAARTTAVGLAIMVVGAGVMSMMSIRQGVFGYVTPLCLITLGYSLFQVANNTALMKHAAPEQRGVISG
MINLSRNLGLITGASAMGALFMLAANADDIKLATAEAISNGMRVTYLAAGVLVAIALVMTIRSRAAIKRDADYSRSPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=419, Percent_Identity=28.8782816229117, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1790195, Length=408, Percent_Identity=27.4509803921569, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788710, Length=316, Percent_Identity=27.5316455696203, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1790146, Length=168, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1789042, Length=322, Percent_Identity=23.6024844720497, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788392, Length=199, Percent_Identity=32.1608040201005, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6323735, Length=474, Percent_Identity=25.3164556962025, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324264, Length=181, Percent_Identity=29.8342541436464, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6319770, Length=159, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49505; Mature: 49505

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPITQHTAPSPHIGGILASLSLSMLVSSLGASIANIGLPSLALAFNTSFQAVQWVMIVY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHH
LLTITTSIIAVGRLGDRIGRRRLLLLGIGLFSVASALCAMAPDIWLLLSARIAQGLGAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MMAMTMALVGETLGKENTGRAMGLLGSMSAIGTALGPSLGGALIFGFGWRAVFLVTFPLG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLALLLAYRYLPHGRPQPQSESGRFDLPGTLLLGVTLACYALSMTLGHGDFGAINLLLLL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
CAGLGIGLFVRLENTTASPLIQPALFRQPGLSSGLMMSALVMTVMMTSLVVGPFYLTRGL
HHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLTVGQAGLAMSAGPLVAALFGVPAGRLVDRLGAARTTAVGLAIMVVGAGVMSMMSIRQG
CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGYVTPLCLITLGYSLFQVANNTALMKHAAPEQRGVISGMINLSRNLGLITGASAMGAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEECHHHHHHH
FMLAANADDIKLATAEAISNGMRVTYLAAGVLVAIALVMTIRSRAAIKRDADYSRSPR
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPITQHTAPSPHIGGILASLSLSMLVSSLGASIANIGLPSLALAFNTSFQAVQWVMIVY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHH
LLTITTSIIAVGRLGDRIGRRRLLLLGIGLFSVASALCAMAPDIWLLLSARIAQGLGAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MMAMTMALVGETLGKENTGRAMGLLGSMSAIGTALGPSLGGALIFGFGWRAVFLVTFPLG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLALLLAYRYLPHGRPQPQSESGRFDLPGTLLLGVTLACYALSMTLGHGDFGAINLLLLL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
CAGLGIGLFVRLENTTASPLIQPALFRQPGLSSGLMMSALVMTVMMTSLVVGPFYLTRGL
HHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLTVGQAGLAMSAGPLVAALFGVPAGRLVDRLGAARTTAVGLAIMVVGAGVMSMMSIRQG
CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGYVTPLCLITLGYSLFQVANNTALMKHAAPEQRGVISGMINLSRNLGLITGASAMGAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCEEECHHHHHHH
FMLAANADDIKLATAEAISNGMRVTYLAAGVLVAIALVMTIRSRAAIKRDADYSRSPR
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]