| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370561
Identifier: 157370561
GI number: 157370561
Start: 2533091
End: 2534395
Strand: Direct
Name: 157370561
Synonym: Spro_2321
Alternate gene names: NA
Gene position: 2533091-2534395 (Clockwise)
Preceding gene: 157370560
Following gene: 157370563
Centisome position: 46.49
GC content: 59.31
Gene sequence:
>1305_bases ATGAGCAACGCCCTGAGATGGCTGTTATGGCTGATTGTCGCAATAGTGGTGCTAGCGGGAGGCTACGCGCTTTATACCCT GTTACGTCCGGTCGGCCCGGAGCCTGCTGCTCCTATCGCCGGGGCCCCGGCGAGCATTAGCGATAAGCTGGCCCGCGGTG AATATCTGGCACGTGCCGCCGACTGCGTGGCCTGCCACACCGCACCTGGCGGCAAACCTTTCGCCGGCGGTTTTGCCTTT AAACTGCCATTCGGCACCATTTACGGCACCAACATTACCGCCGACCCGGAAACCGGGATCGGTGGCTGGAGTGACGATCA GTTTGTGAGTGCGGTGCGTGAAGGCGTCGGTCCACAGGGGAATCTGTATCCGGCCATGCCTTATACTTCCTACACTGGGT TAAGCCGTGACGACGTGCTGGCAATCAAGGCTTATCTGTTCAGCCTGCCGCCGGTGAAGCAGGCGAATCCGGAAAACGGT CTGTCGTTCCCGTTCAACCAGCGCTGGGGCATGAAGTTCTGGAATTTGGCGTTCTTCAACGAAAAACGTTTCGAGCCGAA CCTCAATCAGGATGAGCAATGGAATCGCGGGGCCTATTTGGCGACGGCTCTGGGCCACTGCAGCGAATGCCATACCCCGC GCAATCTGGGTTTTGGCATTAATCAGAGCAAAAACCTCAGCGGTGAGGTGATCCAGGGCTGGTTCGCCGGCAATATTACC CCGGATCGGCAGACCGGTATTGGCGCCTGGAGCGAACAGCAACTGTCGCAATATCTGGCCACCGGCCATGCGGAAGGGCG CAGTAGCGCTTCCGGCCCGATGGCAGAAGCGGTGGAAAACAGCCTGCAGTACCTGACGCCGGAGGACAACCAGGCCCTGG TGAAATATCTGCGCAATATCGAGCCGATCGCCACCGACAGTGCCAGCGCGGTGAATCTGCAGCCGAAGGGCGCGACCTCT TCCAGCGCGGTATTACCGGGTGGGCAGGAAGATTCGCTGGGCCGCAGGCTGTTCGCCGGGGACTGTAGCGGTTGTCACCA GTGGAACGGTACCGGTCGCCAGAGCAAATATGCTTCGTTGGTTGGCAGCACCGCGGTTAACGATCCGCAGGGCCGTAGCG TGGTGCAGGCGATCCTCAAAGGTACGCGCATCAGCATTGGTGAGCAGCACGAGTTTATGCCGGACTTTGGTAGCCAATAC TCGGACGAAGAAGTGGCTGCGGTAGCCAACTACGTGGTGGGCCAGTTTGGTGAAAAACAAGGCAAGGTGACCGCCAAACA GGTGGCGGAGCAGCGTAAGCAGTAA
Upstream 100 bases:
>100_bases ACGCGGCGATGAGTGGCAACGTTTGCCGCTGCGCTACCTACGTGCGCATTCGCGCCGCCATTCACCAGGCCGCCAAGGCG TTGGATTAAGGGAGAAACCC
Downstream 100 bases:
>100_bases CCCTTGGCGAGGGGGTTAACGCCCCCTCGCTACCCATCAGCTTTTACGGCGGGACATTACCAGTTTGTCCCTGGGGCGAT CTTGCCAGTCGGCAATCTGA
Product: gluconate 2-dehydrogenase
Products: NA
Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSNALRWLLWLIVAIVVLAGGYALYTLLRPVGPEPAAPIAGAPASISDKLARGEYLARAADCVACHTAPGGKPFAGGFAF KLPFGTIYGTNITADPETGIGGWSDDQFVSAVREGVGPQGNLYPAMPYTSYTGLSRDDVLAIKAYLFSLPPVKQANPENG LSFPFNQRWGMKFWNLAFFNEKRFEPNLNQDEQWNRGAYLATALGHCSECHTPRNLGFGINQSKNLSGEVIQGWFAGNIT PDRQTGIGAWSEQQLSQYLATGHAEGRSSASGPMAEAVENSLQYLTPEDNQALVKYLRNIEPIATDSASAVNLQPKGATS SSAVLPGGQEDSLGRRLFAGDCSGCHQWNGTGRQSKYASLVGSTAVNDPQGRSVVQAILKGTRISIGEQHEFMPDFGSQY SDEEVAAVANYVVGQFGEKQGKVTAKQVAEQRKQ
Sequences:
>Translated_434_residues MSNALRWLLWLIVAIVVLAGGYALYTLLRPVGPEPAAPIAGAPASISDKLARGEYLARAADCVACHTAPGGKPFAGGFAF KLPFGTIYGTNITADPETGIGGWSDDQFVSAVREGVGPQGNLYPAMPYTSYTGLSRDDVLAIKAYLFSLPPVKQANPENG LSFPFNQRWGMKFWNLAFFNEKRFEPNLNQDEQWNRGAYLATALGHCSECHTPRNLGFGINQSKNLSGEVIQGWFAGNIT PDRQTGIGAWSEQQLSQYLATGHAEGRSSASGPMAEAVENSLQYLTPEDNQALVKYLRNIEPIATDSASAVNLQPKGATS SSAVLPGGQEDSLGRRLFAGDCSGCHQWNGTGRQSKYASLVGSTAVNDPQGRSVVQAILKGTRISIGEQHEFMPDFGSQY SDEEVAAVANYVVGQFGEKQGKVTAKQVAEQRKQ >Mature_433_residues SNALRWLLWLIVAIVVLAGGYALYTLLRPVGPEPAAPIAGAPASISDKLARGEYLARAADCVACHTAPGGKPFAGGFAFK LPFGTIYGTNITADPETGIGGWSDDQFVSAVREGVGPQGNLYPAMPYTSYTGLSRDDVLAIKAYLFSLPPVKQANPENGL SFPFNQRWGMKFWNLAFFNEKRFEPNLNQDEQWNRGAYLATALGHCSECHTPRNLGFGINQSKNLSGEVIQGWFAGNITP DRQTGIGAWSEQQLSQYLATGHAEGRSSASGPMAEAVENSLQYLTPEDNQALVKYLRNIEPIATDSASAVNLQPKGATSS SAVLPGGQEDSLGRRLFAGDCSGCHQWNGTGRQSKYASLVGSTAVNDPQGRSVVQAILKGTRISIGEQHEFMPDFGSQYS DEEVAAVANYVVGQFGEKQGKVTAKQVAEQRKQ
Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR008168 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: =1.1.99.3 [H]
Molecular weight: Translated: 46606; Mature: 46474
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNALRWLLWLIVAIVVLAGGYALYTLLRPVGPEPAAPIAGAPASISDKLARGEYLARAA CCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DCVACHTAPGGKPFAGGFAFKLPFGTIYGTNITADPETGIGGWSDDQFVSAVREGVGPQG HHHEEECCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC NLYPAMPYTSYTGLSRDDVLAIKAYLFSLPPVKQANPENGLSFPFNQRWGMKFWNLAFFN CEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEC EKRFEPNLNQDEQWNRGAYLATALGHCSECHTPRNLGFGINQSKNLSGEVIQGWFAGNIT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEECCCCC PDRQTGIGAWSEQQLSQYLATGHAEGRSSASGPMAEAVENSLQYLTPEDNQALVKYLRNI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC EPIATDSASAVNLQPKGATSSSAVLPGGQEDSLGRRLFAGDCSGCHQWNGTGRQSKYASL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHH VGSTAVNDPQGRSVVQAILKGTRISIGEQHEFMPDFGSQYSDEEVAAVANYVVGQFGEKQ HHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GKVTAKQVAEQRKQ CCCHHHHHHHHHCC >Mature Secondary Structure SNALRWLLWLIVAIVVLAGGYALYTLLRPVGPEPAAPIAGAPASISDKLARGEYLARAA CHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DCVACHTAPGGKPFAGGFAFKLPFGTIYGTNITADPETGIGGWSDDQFVSAVREGVGPQG HHHEEECCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC NLYPAMPYTSYTGLSRDDVLAIKAYLFSLPPVKQANPENGLSFPFNQRWGMKFWNLAFFN CEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEC EKRFEPNLNQDEQWNRGAYLATALGHCSECHTPRNLGFGINQSKNLSGEVIQGWFAGNIT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEECCCCC PDRQTGIGAWSEQQLSQYLATGHAEGRSSASGPMAEAVENSLQYLTPEDNQALVKYLRNI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC EPIATDSASAVNLQPKGATSSSAVLPGGQEDSLGRRLFAGDCSGCHQWNGTGRQSKYASL CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHH VGSTAVNDPQGRSVVQAILKGTRISIGEQHEFMPDFGSQYSDEEVAAVANYVVGQFGEKQ HHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GKVTAKQVAEQRKQ CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9352901 [H]