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The map label for this gene is ydgA [H]

Identifier: 157370516

GI number: 157370516

Start: 2477561

End: 2479090

Strand: Reverse

Name: ydgA [H]

Synonym: Spro_2276

Alternate gene names: 157370516

Gene position: 2479090-2477561 (Counterclockwise)

Preceding gene: 157370517

Following gene: 157370514

Centisome position: 45.5

GC content: 55.23

Gene sequence:

>1530_bases
ATGAAAAAATCGTTAGTCGCTGTTAGCGTCATTGTGGTTCTTGGCGCAGCATGGACCGGGGCTTCCTGGTACACCGGCAA
ACTGATCGAACAACGGATGGGTGAAGTGGTTGATAACGCCAACAGCCAGCTGAAAGCCTACCTGCCGAAAGCCGGTGTCA
AACTGGGTTATGAAAATTACCAACGCGGTATTTTCAGCAGTAAAATTCGCTATGTACTGCGTGCCGACGGCAGCGTCACC
ACCGACGATGCTCCGCTGAAAGCCGGTGACGAAGTGGCGTTTATGGAAACCATCGACCATGGCCCCTTCCCGTTTGCCCA
GTTGAAAAAATTCAACCTGCTGCCAAGCATGGCGTCGGTGCATACCGAACTGGAAAATACCCCGGCGACCAAGGGCCTGT
TTGAAATCACCAAGGGCAAATCGCTGTTCACCGCCGATTCCCGTATCTCCTACAGTGGTGATACCTCGTCTGCCATTGAC
GTGATCCCGCTGGAATACCAGAAAGACAAGTCCTCGCTGAAGTTTAGCGGTGCGACCATCAATGCCGACGTGTCCCGCGA
TATGAAAGCCATCACTCTGGACGCCAACAGCGACAACGCGGTGATCAGCGGCCCGAACCAGTTTGGTCAGACCGAGCAGG
TTCAGCTGCAGGGCTTCTCGCTGAAAAGCCAGACCCACGCCGGGCAGTTCGATCTCAGCCTGGGCAACCAGAACATGGCG
TTGAAACAGGTCAAGGTTGCCGTTGACGGTAAAGAGACCCTGACGCTGGACGGCTTCAAGCTGACAAGCCAATTCGGGGA
GAAAGACACTAACCTGAACGGCCAGATTGATTACACCATGGACGCGCTGAAGATCCAGAACAGCGACTTCGGCTCCGGCA
AGCTATCGCTGAAAATCGACAAACTGGATGCCAAATCGCTGAAAGAGTTTGCCGACCGTTACAACCAGCAGGCCATGCAG
ATGCTGCAACAGGCGCAGACCATGGATCCGGTTGCCTATCAGCAACAAACCACCGATATCCTGCTGCAGAACCTGCCGCT
GCTGTTGAAGGGCAACCCAAGCATCAGCATTGCTCCACTAAGCTGGAAAAACAGCAAGGGCGAAAGTACCTTTACCCTGA
ATCTGGACCTGACCGATCCTGCGCAAGCCGGTTCCCCGGCAGAATCACCGGATCAGCTGATTGCCCGTTCAGTGAAAAAA
CTGGACGCTAATCTGAGCATTCCAGTGGCGATGGCGACCGAAACCACTTCGCAAACCGCGTTACTGCAAGGCTATAGCGC
CGAAGAGGCGCAGAAACTGGCGCAGCAACAGGTGCAGGGTCTGGCGGCCATGGGTCAGATGTTCAAATTGACCACGCTGA
AAGACGGGGTGATCGGCAGTAGCTTCCATTACGCCGACAACCAGGTTGATCTGAACGGCAACAAAATGTCGCTGCAAGAG
TTCATCGGCACCTTTGGCCTGTTGGGTGCACCTGGCCCGGTCGAAACTCCGGCTCCGGACGCAGTCCCTGCTCCGGCACC
CGCCCAGTAA

Upstream 100 bases:

>100_bases
TTAAACGCCTGCGGGTAAACGCCTGCCGGCGTTTTTTATTGGCCCAAATTTGCCCATCCATCTGTTTGCAACAGATGGCT
TTATAAGGATGAACAGAACT

Downstream 100 bases:

>100_bases
TATTTCCCCTCGGGGCCCGCTTGCTCGGGCCCCTGTTTTATCCTTAATCGCCGTACACCGCATCGCGTATCTGCTGAGGA
TACATCCCGCTCATGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMGEVVDNANSQLKAYLPKAGVKLGYENYQRGIFSSKIRYVLRADGSVT
TDDAPLKAGDEVAFMETIDHGPFPFAQLKKFNLLPSMASVHTELENTPATKGLFEITKGKSLFTADSRISYSGDTSSAID
VIPLEYQKDKSSLKFSGATINADVSRDMKAITLDANSDNAVISGPNQFGQTEQVQLQGFSLKSQTHAGQFDLSLGNQNMA
LKQVKVAVDGKETLTLDGFKLTSQFGEKDTNLNGQIDYTMDALKIQNSDFGSGKLSLKIDKLDAKSLKEFADRYNQQAMQ
MLQQAQTMDPVAYQQQTTDILLQNLPLLLKGNPSISIAPLSWKNSKGESTFTLNLDLTDPAQAGSPAESPDQLIARSVKK
LDANLSIPVAMATETTSQTALLQGYSAEEAQKLAQQQVQGLAAMGQMFKLTTLKDGVIGSSFHYADNQVDLNGNKMSLQE
FIGTFGLLGAPGPVETPAPDAVPAPAPAQ

Sequences:

>Translated_509_residues
MKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMGEVVDNANSQLKAYLPKAGVKLGYENYQRGIFSSKIRYVLRADGSVT
TDDAPLKAGDEVAFMETIDHGPFPFAQLKKFNLLPSMASVHTELENTPATKGLFEITKGKSLFTADSRISYSGDTSSAID
VIPLEYQKDKSSLKFSGATINADVSRDMKAITLDANSDNAVISGPNQFGQTEQVQLQGFSLKSQTHAGQFDLSLGNQNMA
LKQVKVAVDGKETLTLDGFKLTSQFGEKDTNLNGQIDYTMDALKIQNSDFGSGKLSLKIDKLDAKSLKEFADRYNQQAMQ
MLQQAQTMDPVAYQQQTTDILLQNLPLLLKGNPSISIAPLSWKNSKGESTFTLNLDLTDPAQAGSPAESPDQLIARSVKK
LDANLSIPVAMATETTSQTALLQGYSAEEAQKLAQQQVQGLAAMGQMFKLTTLKDGVIGSSFHYADNQVDLNGNKMSLQE
FIGTFGLLGAPGPVETPAPDAVPAPAPAQ
>Mature_509_residues
MKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMGEVVDNANSQLKAYLPKAGVKLGYENYQRGIFSSKIRYVLRADGSVT
TDDAPLKAGDEVAFMETIDHGPFPFAQLKKFNLLPSMASVHTELENTPATKGLFEITKGKSLFTADSRISYSGDTSSAID
VIPLEYQKDKSSLKFSGATINADVSRDMKAITLDANSDNAVISGPNQFGQTEQVQLQGFSLKSQTHAGQFDLSLGNQNMA
LKQVKVAVDGKETLTLDGFKLTSQFGEKDTNLNGQIDYTMDALKIQNSDFGSGKLSLKIDKLDAKSLKEFADRYNQQAMQ
MLQQAQTMDPVAYQQQTTDILLQNLPLLLKGNPSISIAPLSWKNSKGESTFTLNLDLTDPAQAGSPAESPDQLIARSVKK
LDANLSIPVAMATETTSQTALLQGYSAEEAQKLAQQQVQGLAAMGQMFKLTTLKDGVIGSSFHYADNQVDLNGNKMSLQE
FIGTFGLLGAPGPVETPAPDAVPAPAPAQ

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=507, Percent_Identity=43.5897435897436, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI87082339, Length=484, Percent_Identity=28.5123966942149, Blast_Score=205, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 54828; Mature: 54828

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMGEVVDNANSQLKAYLPKAGVKLGYENY
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECHHHH
QRGIFSSKIRYVLRADGSVTTDDAPLKAGDEVAFMETIDHGPFPFAQLKKFNLLPSMASV
HCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEHHCCCCCCHHHHHHHCCCCHHHHH
HTELENTPATKGLFEITKGKSLFTADSRISYSGDTSSAIDVIPLEYQKDKSSLKFSGATI
HHHHCCCCCCCCCEEEECCCEEEEECCEEEECCCCCCCEEEEECCCCCCCCCEEECCEEE
NADVSRDMKAITLDANSDNAVISGPNQFGQTEQVQLQGFSLKSQTHAGQFDLSLGNQNMA
ECCCCCCEEEEEEECCCCCCEEECCHHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEE
LKQVKVAVDGKETLTLDGFKLTSQFGEKDTNLNGQIDYTMDALKIQNSDFGSGKLSLKID
EEEEEEEECCCCEEEECCEEHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
KLDAKSLKEFADRYNQQAMQMLQQAQTMDPVAYQQQTTDILLQNLPLLLKGNPSISIAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEE
SWKNSKGESTFTLNLDLTDPAQAGSPAESPDQLIARSVKKLDANLSIPVAMATETTSQTA
CCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHH
LLQGYSAEEAQKLAQQQVQGLAAMGQMFKLTTLKDGVIGSSFHYADNQVDLNGNKMSLQE
HHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCEEECCCCEEHHHH
FIGTFGLLGAPGPVETPAPDAVPAPAPAQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMGEVVDNANSQLKAYLPKAGVKLGYENY
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECHHHH
QRGIFSSKIRYVLRADGSVTTDDAPLKAGDEVAFMETIDHGPFPFAQLKKFNLLPSMASV
HCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEHHCCCCCCHHHHHHHCCCCHHHHH
HTELENTPATKGLFEITKGKSLFTADSRISYSGDTSSAIDVIPLEYQKDKSSLKFSGATI
HHHHCCCCCCCCCEEEECCCEEEEECCEEEECCCCCCCEEEEECCCCCCCCCEEECCEEE
NADVSRDMKAITLDANSDNAVISGPNQFGQTEQVQLQGFSLKSQTHAGQFDLSLGNQNMA
ECCCCCCEEEEEEECCCCCCEEECCHHCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEE
LKQVKVAVDGKETLTLDGFKLTSQFGEKDTNLNGQIDYTMDALKIQNSDFGSGKLSLKID
EEEEEEEECCCCEEEECCEEHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
KLDAKSLKEFADRYNQQAMQMLQQAQTMDPVAYQQQTTDILLQNLPLLLKGNPSISIAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEE
SWKNSKGESTFTLNLDLTDPAQAGSPAESPDQLIARSVKKLDANLSIPVAMATETTSQTA
CCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHH
LLQGYSAEEAQKLAQQQVQGLAAMGQMFKLTTLKDGVIGSSFHYADNQVDLNGNKMSLQE
HHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCEEECCCCEEHHHH
FIGTFGLLGAPGPVETPAPDAVPAPAPAQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]