| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is malI [H]
Identifier: 157370511
GI number: 157370511
Start: 2472046
End: 2473104
Strand: Direct
Name: malI [H]
Synonym: Spro_2271
Alternate gene names: 157370511
Gene position: 2472046-2473104 (Clockwise)
Preceding gene: 157370507
Following gene: 157370513
Centisome position: 45.37
GC content: 61.95
Gene sequence:
>1059_bases ATGCCCAGGATCGGGCTTGCAGAGGTCATGACCATCAAAAAGATCACCATCACCGATGTTGCACAGCAGGCCGGCGTCTC GGTCACTACCGTTTCGCTGGTGCTGAGCGGCAAAGGGCGTATTTCACCCACCACCGTGGCGCGGGTGAACCAGGCGATTG AGCGCTTGGGCTACGTGCGCAACCGTCAGGCGGCGACGCTACGTGGTGGCGAGTCGGGGGTGATTGGGCTGATCCTGCGT GATATCTGCGAGCCGTTTTATGCAGAAATGACCGCGGGCCTGAGCGAGGTGCTGGAGGCGCACGGCAAAGTGCTGTTTCT GACTCAAAGCGGTCGCGACGGCAAGGGGCTGATGCGCTGTTTTGATACTTTGCTCGAGCACGGCATTGACGGCATGGTGC TGGCGGGCGGCGTACGCTCGGCTGAGGGCCTGAAGGAAAAGGCTGCGGAGCAGGGCGTGCCGCTGGTGTGCGCAGCGCGC TCTAATGGGCTGGAAGGGGTCGACGTGGTGCGGCCGGACAACATGCAGGCGGCTAAAATGGCCACCGAATTTCTGATCAA ACGCGGTCACAGCCAAATTGCCTATCTGGGTGGGCAAAGCAGTTCGTTAACCCGCGCAGAACGGTTGGGGGGCTTTTGTG CCACGCTGGTGCAATATGGCCTGCCATTCCGCTCCGACTGGATTGTCGAATGTGACTGCCATCAACGGGCCGCGGCGGAG GCGGCGGAAAACCTGCTACGGCAACATCCCAATATCAGCGCGCTGGTTTGCCACAAGGCGTCGGTGGCATTGGGCGCCTA TTTTGGCATTGTGCGTAGTGGGCGCAGCATCGGTTCTGAGGGGGTGGATACCTATTACGGCCAGCAGGTGGCGCTGATTG GTTTTGGCGACGTGCCTGAGGCCGAACTGACCGAACCGCCGCTGACGCTGGTCTCCAGTTCCGCGCGGGAAGTGGGGCGC AGCGCCGCCTCACGCTTGCTGCAACGGATTGCCGACGCCGACTTACCGCCGCAAAACGTGATCCTGCCGCCATTGCTGAT CAAGCGCGGCTCGGCCTGA
Upstream 100 bases:
>100_bases ATCACAATTCCAGCGTGCACTTTACGGCGACAATGGCAAGACCAGTAAAACGTTTTACTGACCAAACAGATTCGGTATAC CATTTGCCTTACCAGGCAGA
Downstream 100 bases:
>100_bases CCTCATTGTTGTTCATCCGTGACCTGTTGCTGGATCCAACTGACAAACACTTTCATTGCCGGGGTCATATCGCGTGATTT CAGGTGGGTCAGCCAGTAGC
Product: DNA-binding transcriptional repressor MalI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPRIGLAEVMTIKKITITDVAQQAGVSVTTVSLVLSGKGRISPTTVARVNQAIERLGYVRNRQAATLRGGESGVIGLILR DICEPFYAEMTAGLSEVLEAHGKVLFLTQSGRDGKGLMRCFDTLLEHGIDGMVLAGGVRSAEGLKEKAAEQGVPLVCAAR SNGLEGVDVVRPDNMQAAKMATEFLIKRGHSQIAYLGGQSSSLTRAERLGGFCATLVQYGLPFRSDWIVECDCHQRAAAE AAENLLRQHPNISALVCHKASVALGAYFGIVRSGRSIGSEGVDTYYGQQVALIGFGDVPEAELTEPPLTLVSSSAREVGR SAASRLLQRIADADLPPQNVILPPLLIKRGSA
Sequences:
>Translated_352_residues MPRIGLAEVMTIKKITITDVAQQAGVSVTTVSLVLSGKGRISPTTVARVNQAIERLGYVRNRQAATLRGGESGVIGLILR DICEPFYAEMTAGLSEVLEAHGKVLFLTQSGRDGKGLMRCFDTLLEHGIDGMVLAGGVRSAEGLKEKAAEQGVPLVCAAR SNGLEGVDVVRPDNMQAAKMATEFLIKRGHSQIAYLGGQSSSLTRAERLGGFCATLVQYGLPFRSDWIVECDCHQRAAAE AAENLLRQHPNISALVCHKASVALGAYFGIVRSGRSIGSEGVDTYYGQQVALIGFGDVPEAELTEPPLTLVSSSAREVGR SAASRLLQRIADADLPPQNVILPPLLIKRGSA >Mature_351_residues PRIGLAEVMTIKKITITDVAQQAGVSVTTVSLVLSGKGRISPTTVARVNQAIERLGYVRNRQAATLRGGESGVIGLILRD ICEPFYAEMTAGLSEVLEAHGKVLFLTQSGRDGKGLMRCFDTLLEHGIDGMVLAGGVRSAEGLKEKAAEQGVPLVCAARS NGLEGVDVVRPDNMQAAKMATEFLIKRGHSQIAYLGGQSSSLTRAERLGGFCATLVQYGLPFRSDWIVECDCHQRAAAEA AENLLRQHPNISALVCHKASVALGAYFGIVRSGRSIGSEGVDTYYGQQVALIGFGDVPEAELTEPPLTLVSSSAREVGRS AASRLLQRIADADLPPQNVILPPLLIKRGSA
Specific function: Repressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787906, Length=337, Percent_Identity=55.786350148368, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI1790194, Length=337, Percent_Identity=27.0029673590504, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1790369, Length=316, Percent_Identity=27.2151898734177, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789068, Length=338, Percent_Identity=28.1065088757396, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI48994940, Length=334, Percent_Identity=27.5449101796407, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788474, Length=346, Percent_Identity=25.7225433526012, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787948, Length=337, Percent_Identity=25.8160237388724, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789202, Length=336, Percent_Identity=25.8928571428571, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786540, Length=341, Percent_Identity=24.633431085044, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787580, Length=333, Percent_Identity=25.2252252252252, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790715, Length=332, Percent_Identity=24.6987951807229, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1786268, Length=308, Percent_Identity=24.6753246753247, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790689, Length=353, Percent_Identity=25.7790368271955, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37377; Mature: 37245
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50943 HTH_CROC1 ; PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIGLAEVMTIKKITITDVAQQAGVSVTTVSLVLSGKGRISPTTVARVNQAIERLGYVR CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH NRQAATLRGGESGVIGLILRDICEPFYAEMTAGLSEVLEAHGKVLFLTQSGRDGKGLMRC CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH FDTLLEHGIDGMVLAGGVRSAEGLKEKAAEQGVPLVCAARSNGLEGVDVVRPDNMQAAKM HHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCHHHHH ATEFLIKRGHSQIAYLGGQSSSLTRAERLGGFCATLVQYGLPFRSDWIVECDCHQRAAAE HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHH AAENLLRQHPNISALVCHKASVALGAYFGIVRSGRSIGSEGVDTYYGQQVALIGFGDVPE HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCC AELTEPPLTLVSSSAREVGRSAASRLLQRIADADLPPQNVILPPLLIKRGSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure PRIGLAEVMTIKKITITDVAQQAGVSVTTVSLVLSGKGRISPTTVARVNQAIERLGYVR CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH NRQAATLRGGESGVIGLILRDICEPFYAEMTAGLSEVLEAHGKVLFLTQSGRDGKGLMRC CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH FDTLLEHGIDGMVLAGGVRSAEGLKEKAAEQGVPLVCAARSNGLEGVDVVRPDNMQAAKM HHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCHHHHH ATEFLIKRGHSQIAYLGGQSSSLTRAERLGGFCATLVQYGLPFRSDWIVECDCHQRAAAE HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHH AAENLLRQHPNISALVCHKASVALGAYFGIVRSGRSIGSEGVDTYYGQQVALIGFGDVPE HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCC AELTEPPLTLVSSSAREVGRSAASRLLQRIADADLPPQNVILPPLLIKRGSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670898; 1856179; 9097039; 9278503 [H]