| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ampC [H]
Identifier: 157370513
GI number: 157370513
Start: 2474186
End: 2475322
Strand: Direct
Name: ampC [H]
Synonym: Spro_2273
Alternate gene names: 157370513
Gene position: 2474186-2475322 (Clockwise)
Preceding gene: 157370511
Following gene: 157370515
Centisome position: 45.41
GC content: 56.73
Gene sequence:
>1137_bases ATGACCAAAATAAATCGCCTGGCGGCCGCGTTGTTGGCCGCAATGATCCTGCCGGCAGGCCATGCCGCCGACAAAGCCGA GATTGACGCCATTATTCAGCCGCTGATGCAAAAATACGGCGTGCCGGGCATGGCCATCGCCGTGTCGGTGGACGGGAAAC AGCAGTTTTATGATTATGGTGTGGCGTCCAAACAGACCGGCAAGCCGATCACCAACCAGACCCTGTTTGAAGTGGGCTCA TTGAGCAAAACCTTCACCGCCACGCTGGCGGCCTATGCGCAAAATGAGGGCAAACTGTCGTTCGCCGAACCGGCCAGCCA TTACCTGTCTGAGCTGCGTGGCAGTGCATTTGACCGTGTCAGCCTGCTGAACCTGGCGACACACACCTCCGGCTTGCCGC TGTTTGTCCCGGACGAAGTGACCAATGACGCGCAATTGATGGCGTATTACAAAAACTGGCAGCCACCACATGCCGTGGGG AGTTATCGGGTTTATTCCAACCTGGGTATTGGCATGCTGGGGATGATCACCGCCAAAAGCCTGAACCAGCCCTTTGCGCA GGCGATGGAAAAACAGCTGCTGCCGGCTTTGGGCATGAACCACAGCTACGTTAATGTTCCGGCTGCGCAGATGGATAATT ACGCGCAGGGCTACAACAAGAAAGACCAACCGGTGCGAGTCACCCCCGGCCCGTTGGACGCAGAATCCTACGGCATCAAA TCCAATGCCGAGGATCTGATCCGTTACCTTGAAGCCAACATGCAGGTGGCCAAGGTGGGGGATAAGTGGCGCAAGGCACT GGCAGCTACCCATACCGGTTATTACCGGGCCGGGGTGTTCACCCAGGATCTGATGTGGGAAAGCTACGCTTATCCGGAAA AGTTGACGACGCTGACGGAAGGCAACAACGCCGGGATGATCATGAACGGCACTCCGGCCACCGCCATCACGCCACCGAAG CAGGAACAGGGCGCTGCCTGGTACAATAAAACCGGATCGACCGGTGGCTTCTCCACCTACGCGGTATTCATCCCATCGAA GAAAATTGCCGTGGTGATGCTGGCCAACAAATGGTTCCCGAACGACGATCGGGTTGCGGCCACCTACCAGTTGATACAGG CGCTGGATAAACGTTAA
Upstream 100 bases:
>100_bases TCAGAAAAGGAATAACACCATCATCCAAGGATATCTTCGCGTCGACAGGCAATAAAATCTTTTGCCATCGGCCGATACCC TGCAAACCAAGAGCTTTCAC
Downstream 100 bases:
>100_bases TTAATGGCCTCTCAGGACGCTGTAATGGCGTCCTGAGACGATGACTGGTGCGCCCGCTTTTCCCGCATAAAATCAACAAA TACCCGCAGCTTGAGCGGCA
Product: beta-lactamase
Products: NA
Alternate protein names: Cephalosporinase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTKINRLAAALLAAMILPAGHAADKAEIDAIIQPLMQKYGVPGMAIAVSVDGKQQFYDYGVASKQTGKPITNQTLFEVGS LSKTFTATLAAYAQNEGKLSFAEPASHYLSELRGSAFDRVSLLNLATHTSGLPLFVPDEVTNDAQLMAYYKNWQPPHAVG SYRVYSNLGIGMLGMITAKSLNQPFAQAMEKQLLPALGMNHSYVNVPAAQMDNYAQGYNKKDQPVRVTPGPLDAESYGIK SNAEDLIRYLEANMQVAKVGDKWRKALAATHTGYYRAGVFTQDLMWESYAYPEKLTTLTEGNNAGMIMNGTPATAITPPK QEQGAAWYNKTGSTGGFSTYAVFIPSKKIAVVMLANKWFPNDDRVAATYQLIQALDKR
Sequences:
>Translated_378_residues MTKINRLAAALLAAMILPAGHAADKAEIDAIIQPLMQKYGVPGMAIAVSVDGKQQFYDYGVASKQTGKPITNQTLFEVGS LSKTFTATLAAYAQNEGKLSFAEPASHYLSELRGSAFDRVSLLNLATHTSGLPLFVPDEVTNDAQLMAYYKNWQPPHAVG SYRVYSNLGIGMLGMITAKSLNQPFAQAMEKQLLPALGMNHSYVNVPAAQMDNYAQGYNKKDQPVRVTPGPLDAESYGIK SNAEDLIRYLEANMQVAKVGDKWRKALAATHTGYYRAGVFTQDLMWESYAYPEKLTTLTEGNNAGMIMNGTPATAITPPK QEQGAAWYNKTGSTGGFSTYAVFIPSKKIAVVMLANKWFPNDDRVAATYQLIQALDKR >Mature_377_residues TKINRLAAALLAAMILPAGHAADKAEIDAIIQPLMQKYGVPGMAIAVSVDGKQQFYDYGVASKQTGKPITNQTLFEVGSL SKTFTATLAAYAQNEGKLSFAEPASHYLSELRGSAFDRVSLLNLATHTSGLPLFVPDEVTNDAQLMAYYKNWQPPHAVGS YRVYSNLGIGMLGMITAKSLNQPFAQAMEKQLLPALGMNHSYVNVPAAQMDNYAQGYNKKDQPVRVTPGPLDAESYGIKS NAEDLIRYLEANMQVAKVGDKWRKALAATHTGYYRAGVFTQDLMWESYAYPEKLTTLTEGNNAGMIMNGTPATAITPPKQ EQGAAWYNKTGSTGGFSTYAVFIPSKKIAVVMLANKWFPNDDRVAATYQLIQALDKR
Specific function: This protein is a serine beta-lactamase with a substrate specificity for cephalosporins [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-C beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI1790593, Length=350, Percent_Identity=39.7142857142857, Blast_Score=282, Evalue=2e-77, Organism=Escherichia coli, GI1786574, Length=379, Percent_Identity=24.5382585751979, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115533026, Length=250, Percent_Identity=24, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001586 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 41203; Mature: 41072
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00336 BETA_LACTAMASE_C
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKINRLAAALLAAMILPAGHAADKAEIDAIIQPLMQKYGVPGMAIAVSVDGKQQFYDYG CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCC VASKQTGKPITNQTLFEVGSLSKTFTATLAAYAQNEGKLSFAEPASHYLSELRGSAFDRV CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCHHHHH SLLNLATHTSGLPLFVPDEVTNDAQLMAYYKNWQPPHAVGSYRVYSNLGIGMLGMITAKS HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH LNQPFAQAMEKQLLPALGMNHSYVNVPAAQMDNYAQGYNKKDQPVRVTPGPLDAESYGIK CCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC SNAEDLIRYLEANMQVAKVGDKWRKALAATHTGYYRAGVFTQDLMWESYAYPEKLTTLTE CCHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHEEEC GNNAGMIMNGTPATAITPPKQEQGAAWYNKTGSTGGFSTYAVFIPSKKIAVVMLANKWFP CCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCC NDDRVAATYQLIQALDKR CCCCHHHHHHHHHHHHCC >Mature Secondary Structure TKINRLAAALLAAMILPAGHAADKAEIDAIIQPLMQKYGVPGMAIAVSVDGKQQFYDYG CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCC VASKQTGKPITNQTLFEVGSLSKTFTATLAAYAQNEGKLSFAEPASHYLSELRGSAFDRV CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCHHHHH SLLNLATHTSGLPLFVPDEVTNDAQLMAYYKNWQPPHAVGSYRVYSNLGIGMLGMITAKS HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH LNQPFAQAMEKQLLPALGMNHSYVNVPAAQMDNYAQGYNKKDQPVRVTPGPLDAESYGIK CCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC SNAEDLIRYLEANMQVAKVGDKWRKALAATHTGYYRAGVFTQDLMWESYAYPEKLTTLTE CCHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHEEEC GNNAGMIMNGTPATAITPPKQEQGAAWYNKTGSTGGFSTYAVFIPSKKIAVVMLANKWFP CCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCC NDDRVAATYQLIQALDKR CCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2227364 [H]