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The map label for this gene is araH [H]

Identifier: 157370487

GI number: 157370487

Start: 2449251

End: 2450234

Strand: Direct

Name: araH [H]

Synonym: Spro_2247

Alternate gene names: 157370487

Gene position: 2449251-2450234 (Clockwise)

Preceding gene: 157370486

Following gene: 157370488

Centisome position: 44.95

GC content: 58.43

Gene sequence:

>984_bases
ATGTCGACCATAACGACCCATTCTGTGAAAAAACGCAACGGCCTGGGGCTGGCGCGAATTTGGGACAGCTACGGCATGCT
GGTGGTGTTTGCGGTGCTGTTTTTAGCTTGCGCGCTGTTTGTGCCCAACTTTGGTTCCTTTATCAATATGAAAGGGCTGG
GGCTGGCGATTTCGATGTCCGGCATGGTGGCCTGCGGCATGCTGTTCTGCCTGGCCTCCGGTGACTTTGACCTGTCGGTC
GCTTCGGTGATTGCCTGCGCCGGGGTGACCACCGCGGTGGTGATCAACATGACCGAAAGCCTGTGGATCGGCGTGGCCGC
CGGTCTGTTACTGGGCATGGTCTCCGGGTTGATTAACGGTTTCGTTATCGCCCGGCTGAAAATCAACGCGCTGATCACCA
CCCTGGCCACCATGCAGATTTTCCGCGGGCTGGCCTACATTATCTCCGACGGTAAAGCGGTGGGCATTGAGGACGAACGC
TTCTTCGCCCTGGGTTACGCCAACTGGCTGGGCCTGCCTGCGCCGATCTGGATCACCGTCGCCTGTCTGATCCTGTTTGG
CTTCCTGCTCAACAAGACCACCTTTGGCCGCAATACGCTGGCGATTGGCGGTAACGAAGAGGCCGCGCGGTTGGCCGGGG
TGCCGGTGGTACGCACCAAAATCGTGATCTTTATGCTGTCCGGGCTGGTGTCCGCCGCCGCCGGTATCATTCTGGCTTCG
CGCATGACCAGTGGCCAGCCAATGACCTCAATTGGCTATGAGCTGATCGTGATCTCCGCCTGCGTGCTGGGTGGTGTGTC
ACTGAAAGGCGGCATCGGTAAAATTTCCTACGTTATCGCCGGCATTCTGATCCTGGGCACGGTGGAAAACGCCATGAACC
TGCTGAATATCTCGCCGTTCTCGCAGTATGTGGTGCGCGGCGTGATCCTGCTGGCGGCGGTGATTTTCGACCGTTACAAA
CAGCAGGCCAAGCGCAGCGTTTAA

Upstream 100 bases:

>100_bases
AGGCCAGTGAGGAAAAAGCCCTCAGCCTGGCGATGCTGCGCACCCCCGATATAGCCCCAGATGCCGCTGCGGCGGTGGCC
TGATTGTGAAGGAGAAAGAG

Downstream 100 bases:

>100_bases
ATTGCCAACCCTGTTCACAGTTCTGTTATCGGCCCGGGCAGTTATCCACCGGGCCGCTAAGCTAGGATTGATATCTAAGC
TATAAGATTGCCGGGAGGAC

Product: L-arabinose transporter permease

Products: ADP; phosphate; arabinose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSTITTHSVKKRNGLGLARIWDSYGMLVVFAVLFLACALFVPNFGSFINMKGLGLAISMSGMVACGMLFCLASGDFDLSV
ASVIACAGVTTAVVINMTESLWIGVAAGLLLGMVSGLINGFVIARLKINALITTLATMQIFRGLAYIISDGKAVGIEDER
FFALGYANWLGLPAPIWITVACLILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILAS
RMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPFSQYVVRGVILLAAVIFDRYK
QQAKRSV

Sequences:

>Translated_327_residues
MSTITTHSVKKRNGLGLARIWDSYGMLVVFAVLFLACALFVPNFGSFINMKGLGLAISMSGMVACGMLFCLASGDFDLSV
ASVIACAGVTTAVVINMTESLWIGVAAGLLLGMVSGLINGFVIARLKINALITTLATMQIFRGLAYIISDGKAVGIEDER
FFALGYANWLGLPAPIWITVACLILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILAS
RMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPFSQYVVRGVILLAAVIFDRYK
QQAKRSV
>Mature_326_residues
STITTHSVKKRNGLGLARIWDSYGMLVVFAVLFLACALFVPNFGSFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVA
SVIACAGVTTAVVINMTESLWIGVAAGLLLGMVSGLINGFVIARLKINALITTLATMQIFRGLAYIISDGKAVGIEDERF
FALGYANWLGLPAPIWITVACLILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILASR
MTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPFSQYVVRGVILLAAVIFDRYKQ
QAKRSV

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693152, Length=328, Percent_Identity=87.8048780487805, Blast_Score=556, Evalue=1e-160,
Organism=Escherichia coli, GI1790191, Length=322, Percent_Identity=35.0931677018634, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788896, Length=313, Percent_Identity=33.5463258785943, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1790524, Length=323, Percent_Identity=29.4117647058824, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789992, Length=341, Percent_Identity=31.0850439882698, Blast_Score=131, Evalue=8e-32,
Organism=Escherichia coli, GI87082395, Length=272, Percent_Identity=33.0882352941176, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787793, Length=256, Percent_Identity=34.375, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=29.5620437956204, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788471, Length=269, Percent_Identity=34.9442379182156, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693214, Length=260, Percent_Identity=35.7692307692308, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34406; Mature: 34275

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITTHSVKKRNGLGLARIWDSYGMLVVFAVLFLACALFVPNFGSFINMKGLGLAISMS
CCCCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEHH
GMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVAAGLLLGMVSGLING
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIARLKINALITTLATMQIFRGLAYIISDGKAVGIEDERFFALGYANWLGLPAPIWITV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHCCCCCHHHHHH
ACLILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILAS
HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPF
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SQYVVRGVILLAAVIFDRYKQQAKRSV
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STITTHSVKKRNGLGLARIWDSYGMLVVFAVLFLACALFVPNFGSFINMKGLGLAISMS
CCCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEHH
GMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVAAGLLLGMVSGLING
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIARLKINALITTLATMQIFRGLAYIISDGKAVGIEDERFFALGYANWLGLPAPIWITV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHCCCCCHHHHHH
ACLILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIVIFMLSGLVSAAAGIILAS
HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGILILGTVENAMNLLNISPF
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SQYVVRGVILLAAVIFDRYKQQAKRSV
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; arabinose [Periplasm]; H2O [C]

Specific reaction: ATP + arabinose [Periplasm] + H2O = ADP + phosphate + arabinose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2445996; 9097040; 9278503; 8045430 [H]