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The map label for this gene is ydhO [H]

Identifier: 157370437

GI number: 157370437

Start: 2399503

End: 2400324

Strand: Reverse

Name: ydhO [H]

Synonym: Spro_2197

Alternate gene names: 157370437

Gene position: 2400324-2399503 (Counterclockwise)

Preceding gene: 157370439

Following gene: 157370436

Centisome position: 44.05

GC content: 49.64

Gene sequence:

>822_bases
ATGCGTTTAATTCTTACGCTTTTTGTGCTGTTGTTTACACAGCTATTCTTTAATCTGGCGCATGCAGCGCCACAGGCACG
TGTTGCCGCTGAGCAGCGCAAGAGCCACGTAAACGAAGCCCGGCCGGATGACCGCAAGAAAAAGAAAGCGGTTAAGGCCA
GCAGCAAAAAAGTAAAAGTCACTACTCCGCAGAAAACCGCCAAGGTCTCCAAAGCCAAAACAGAAAAAACCGCTAAAAAG
ATCGTTAGCGCAAAATCAAAAAACAAAACTCATAAAATAGCCAAAATTAAAGTGACCCCACCGAAGAAGGGCTATAAAAA
AGGCTATGGGCGCCATCGTGAAACCGGTATGGCAACCGCCAAATTGGTGGCTGACGAAAAACCACTGAAGCTCAGCCCTG
CGCACAAAAAACGCTACCAGCATGCCAAGCAAACCGCGATGGCCAAGCTGATGGATCAAATGGGTAAACCTTATCGCTGG
GGTGGCTCCTCGCCAAGAACCGGCTTTGACTGTAGCGGTCTGATTTATTACGCCTATAAAGACATCGTTAAAATTAAAAT
GCCGCGTACCGCCAACGAGATGTATCACCTGCGTGACGCAGCGCCGATCAAGAAGAGTGAGCTGGAAAGCGGCGATCTGG
TGTTCTTCCGCATTAACAACCGCGGCGTGGCAGACCATGTTGGGGTTTATTTGGGTAACGGCAAATTCATTCAGTCCCCG
CGTACCGGCGAAGAAATCCGCATCAGCCAGCTCGATAACGACTACTGGCAAAACCACTACATCGGCGCACGCCGGGTAGT
CACGCCAAAAACCATTCGATAA

Upstream 100 bases:

>100_bases
GATTATCATTTATGAGTTCTTCGCTGTTTTATATGGCGAAATTCGGGAATACTGTCACTCATTCGATATCTGTTCCGGGG
CCAAGGTTGGTAACGTCGAC

Downstream 100 bases:

>100_bases
ACTCCCTTGCGGCTGGCGCTGTCAGCCGCTCTCCCCTGATCGTTTCCCCAAACCTCGTAGTCATAACCAATCCCTTGCCC
GTTCCCCCTGTAATTCATCG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRLILTLFVLLFTQLFFNLAHAAPQARVAAEQRKSHVNEARPDDRKKKKAVKASSKKVKVTTPQKTAKVSKAKTEKTAKK
IVSAKSKNKTHKIAKIKVTPPKKGYKKGYGRHRETGMATAKLVADEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRW
GGSSPRTGFDCSGLIYYAYKDIVKIKMPRTANEMYHLRDAAPIKKSELESGDLVFFRINNRGVADHVGVYLGNGKFIQSP
RTGEEIRISQLDNDYWQNHYIGARRVVTPKTIR

Sequences:

>Translated_273_residues
MRLILTLFVLLFTQLFFNLAHAAPQARVAAEQRKSHVNEARPDDRKKKKAVKASSKKVKVTTPQKTAKVSKAKTEKTAKK
IVSAKSKNKTHKIAKIKVTPPKKGYKKGYGRHRETGMATAKLVADEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRW
GGSSPRTGFDCSGLIYYAYKDIVKIKMPRTANEMYHLRDAAPIKKSELESGDLVFFRINNRGVADHVGVYLGNGKFIQSP
RTGEEIRISQLDNDYWQNHYIGARRVVTPKTIR
>Mature_273_residues
MRLILTLFVLLFTQLFFNLAHAAPQARVAAEQRKSHVNEARPDDRKKKKAVKASSKKVKVTTPQKTAKVSKAKTEKTAKK
IVSAKSKNKTHKIAKIKVTPPKKGYKKGYGRHRETGMATAKLVADEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRW
GGSSPRTGFDCSGLIYYAYKDIVKIKMPRTANEMYHLRDAAPIKKSELESGDLVFFRINNRGVADHVGVYLGNGKFIQSP
RTGEEIRISQLDNDYWQNHYIGARRVVTPKTIR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=277, Percent_Identity=53.4296028880866, Blast_Score=271, Evalue=3e-74,
Organism=Escherichia coli, GI1786421, Length=129, Percent_Identity=57.3643410852713, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI1788001, Length=126, Percent_Identity=38.0952380952381, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788501, Length=156, Percent_Identity=31.4102564102564, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 30933; Mature: 30933

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILTLFVLLFTQLFFNLAHAAPQARVAAEQRKSHVNEARPDDRKKKKAVKASSKKVKV
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEE
TTPQKTAKVSKAKTEKTAKKIVSAKSKNKTHKIAKIKVTPPKKGYKKGYGRHRETGMATA
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCHHHCHHHH
KLVADEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRWGGSSPRTGFDCSGLIYYAYK
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHEEEH
DIVKIKMPRTANEMYHLRDAAPIKKSELESGDLVFFRINNRGVADHVGVYLGNGKFIQSP
HHHEEECCCCHHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCCHHHCCEEECCCEEECCC
RTGEEIRISQLDNDYWQNHYIGARRVVTPKTIR
CCCCEEEEECCCCHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure
MRLILTLFVLLFTQLFFNLAHAAPQARVAAEQRKSHVNEARPDDRKKKKAVKASSKKVKV
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEE
TTPQKTAKVSKAKTEKTAKKIVSAKSKNKTHKIAKIKVTPPKKGYKKGYGRHRETGMATA
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCHHHCHHHH
KLVADEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRWGGSSPRTGFDCSGLIYYAYK
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHEEEH
DIVKIKMPRTANEMYHLRDAAPIKKSELESGDLVFFRINNRGVADHVGVYLGNGKFIQSP
HHHEEECCCCHHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCCHHHCCEEECCCEEECCC
RTGEEIRISQLDNDYWQNHYIGARRVVTPKTIR
CCCCEEEEECCCCHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]