Click here to switch to the map view.

The map label for this gene is 157370428

Identifier: 157370428

GI number: 157370428

Start: 2389884

End: 2390189

Strand: Reverse

Name: 157370428

Synonym: Spro_2188

Alternate gene names: NA

Gene position: 2390189-2389884 (Counterclockwise)

Preceding gene: 157370429

Following gene: 157370427

Centisome position: 43.87

GC content: 54.9

Gene sequence:

>306_bases
ATGCTGACATTTACTGCCCAGACCCCGTTCGAGAAACTCGACAACGGCCTCATCCGCCGGCAAGGCATCATGAGCAACGG
CGCCCGTGCCACCGAAGTGAAATTCGACGCCGGTACCTTTGGCCAGTTGCAAAAGCGCGATTTCTCTTTGCAAACGCAGG
TGGTTTCCGGTGAGTTTGAATTCACTCTGGGCAATGACATTCAGGTGGTGGTAGCCGGGGAAAGCATCGTTATTCCTGCC
AACACCGCCAGCGGCTGTTTCTGTCTGACTGCAGGTACCCTGTGGGAAATCATTACCACAGGCTGA

Upstream 100 bases:

>100_bases
CTTTACCGTTAACTCGCCAGTACGATCCCGTAGCTTTGCTCCTGTCACCGCAAGCCGTATCAGGTATCATCAAGGCGAAT
ACCTTATCAGGACCGAATCC

Downstream 100 bases:

>100_bases
TCGACAATAGTCTCACCAATGAAGTGGTTATTTGCGCAACAAACACCGGCTAAGGGTTTGCATTTGCGCCATATTTACTG
CTGATTTGACGGAACCGAGG

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Pectin Degradation Protein KdgF

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLTFTAQTPFEKLDNGLIRRQGIMSNGARATEVKFDAGTFGQLQKRDFSLQTQVVSGEFEFTLGNDIQVVVAGESIVIPA
NTASGCFCLTAGTLWEIITTG

Sequences:

>Translated_101_residues
MLTFTAQTPFEKLDNGLIRRQGIMSNGARATEVKFDAGTFGQLQKRDFSLQTQVVSGEFEFTLGNDIQVVVAGESIVIPA
NTASGCFCLTAGTLWEIITTG
>Mature_101_residues
MLTFTAQTPFEKLDNGLIRRQGIMSNGARATEVKFDAGTFGQLQKRDFSLQTQVVSGEFEFTLGNDIQVVVAGESIVIPA
NTASGCFCLTAGTLWEIITTG

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10878; Mature: 10878

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFTAQTPFEKLDNGLIRRQGIMSNGARATEVKFDAGTFGQLQKRDFSLQTQVVSGEFE
CEEECCCCCHHHHCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEE
FTLGNDIQVVVAGESIVIPANTASGCFCLTAGTLWEIITTG
EEECCCEEEEEECCEEEEECCCCCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MLTFTAQTPFEKLDNGLIRRQGIMSNGARATEVKFDAGTFGQLQKRDFSLQTQVVSGEFE
CEEECCCCCHHHHCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEE
FTLGNDIQVVVAGESIVIPANTASGCFCLTAGTLWEIITTG
EEECCCEEEEEECCEEEEECCCCCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA