| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pykF [H]
Identifier: 157370427
GI number: 157370427
Start: 2388069
End: 2389481
Strand: Reverse
Name: pykF [H]
Synonym: Spro_2187
Alternate gene names: 157370427
Gene position: 2389481-2388069 (Counterclockwise)
Preceding gene: 157370428
Following gene: 157370426
Centisome position: 43.85
GC content: 54.28
Gene sequence:
>1413_bases ATGAAAAAGACCAAAATTGTTTGTACCATCGGTCCAAAAACCGAATCGGAAGAAATGCTGACCAACCTGCTGAATGCAGG CATGAACGTAATGCGCCTTAACTTCTCCCACGGCGATTATGAAGAGCACGGCAACCGCATCAAGAACATGCGCGCCGTGA TGGCGAAAACCGGTCAGAACGCCGGCATCCTGTTGGATACCAAAGGCCCGGAAATTCGCACCATGAAACTGGAAGGCGGT AAAGACGCGGCGCTGGTTGCCGGTCAGACCTTCACTTTCACCACCGATCAGAGCGTTATCGGCAACAACGAACGCGTTGC GGTAACCTACGCCGGCTTTAGCGCTGACCTGAAAATCGGCAACACCGTATTGGTGGATGACGGCTTGATCGGCATGGAAG TCACCAACGTGACCGAAAGCGAAGTGATCTGTAAGGTGCTGAACAGCGGCGACCTGGGCGAAAACAAAGGCGTTAACCTG CCGGGCGTTTCCATCCAACTGCCTGCACTGGCCGAAAAAGACAAACGCGACCTGATTTTCGGCTGCGAACAGGGCGTGGA CTTCGTTGCCGCTTCCTTCATCCGCAAGCGTTCTGACGTGCTGGAAATTCGTGAGCACCTGAAAGCGCACGGCGGCTCGC AGATCCAAATTATCTCCAAAATCGAAAACCAGGAAGGCCTGAACAACTTCGACGAAATCCTCGAAGCTTCTGACGGCATC ATGGTTGCTCGTGGCGATCTGGGCGTTGAAATCCCGGTAGAAGAAGTTATCTTCGCTCAGAAGATGATGATCGAAAAATG TAACCGTGCACGCAAAGTGGTGATCACCGCCACCCAAATGCTCGATTCCATGATCAAGAACCCACGCCCTACCCGTGCAG AAGCCGGCGACGTAGCTAACGCCATTTTGGACGGTACCGACGCCGTGATGCTGTCTGGTGAGAGCGCCAAGGGCAAGTAC CCACTGGAAGCCGTTACCATCATGGCGACCATCTGTGAGCGCACCGACCGCGTGATGCCAAGCCGTATCGACAGCCTGCA TGACAACCGCAAGCTGCGCATCACCGAAGCCGTATGCCGTGGTGCTGTTGAAACCGCAGAGAAACTGGATGCACCACTGA TCGTAGTGGCCACCAGCGGCGGCAAGTCAGCCAAATCCGTGCGTAAATACTTCCCTAACGCTGTGATCCTGGCGCTGACC ACCAACGAAACTACCGCTCATCAGCTTATTCTGACCAAGGGCGTGATCCCACAGATGGTCAAGGAAATTGCCTCTACCGA CGACTTCTATCGCATCGGTAAAGAAGCGGCATTGGCCAGCGGTTTGGCTCAAAAAGGCGACGTTGTAGTGATGGTTTCTG GTGCACTGGTACCAAGCGGCACTACCAATACTGCCTCGGTGCACGTACTCTAA
Upstream 100 bases:
>100_bases GTGTTTTGCACCACCAGGCACGACTCAAATCCCTTATCAGTGGCCTGACCGCTGGTTTTATTCGTTTTATTATCCATCAC AACTTGTAGAAAACTCCGTC
Downstream 100 bases:
>100_bases TATAAAACGTGACATAATTATTTTGACAAAAACGCCGCTTTGCGGCGTTTTTTTTAACACTGGTAAACCGTTTTCTCAAA AACGCAACCGTGGATTGCTC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-1 [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVMAKTGQNAGILLDTKGPEIRTMKLEGG KDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIGNTVLVDDGLIGMEVTNVTESEVICKVLNSGDLGENKGVNL PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKAHGGSQIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICERTDRVMPSRIDSLHDNRKLRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALT TNETTAHQLILTKGVIPQMVKEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL
Sequences:
>Translated_470_residues MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVMAKTGQNAGILLDTKGPEIRTMKLEGG KDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIGNTVLVDDGLIGMEVTNVTESEVICKVLNSGDLGENKGVNL PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKAHGGSQIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICERTDRVMPSRIDSLHDNRKLRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALT TNETTAHQLILTKGVIPQMVKEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL >Mature_470_residues MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVMAKTGQNAGILLDTKGPEIRTMKLEGG KDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIGNTVLVDDGLIGMEVTNVTESEVICKVLNSGDLGENKGVNL PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKAHGGSQIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY PLEAVTIMATICERTDRVMPSRIDSLHDNRKLRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALT TNETTAHQLILTKGVIPQMVKEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=46.7078189300411, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=46.7078189300411, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI33286418, Length=487, Percent_Identity=46.8172484599589, Blast_Score=394, Evalue=1e-110, Organism=Homo sapiens, GI10835121, Length=486, Percent_Identity=46.0905349794239, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI32967597, Length=486, Percent_Identity=46.0905349794239, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=49.3055555555556, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=49.3055555555556, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=43.6440677966102, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=43.6440677966102, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=43.2558139534884, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=87.0212765957447, Blast_Score=842, Evalue=0.0, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=37.551867219917, Blast_Score=274, Evalue=8e-75, Organism=Caenorhabditis elegans, GI17544584, Length=480, Percent_Identity=41.875, Blast_Score=360, Evalue=1e-99, Organism=Caenorhabditis elegans, GI17506831, Length=483, Percent_Identity=45.9627329192547, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI71984406, Length=483, Percent_Identity=45.9627329192547, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI71984413, Length=480, Percent_Identity=46.25, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI17506829, Length=480, Percent_Identity=46.25, Blast_Score=352, Evalue=3e-97, Organism=Saccharomyces cerevisiae, GI6319279, Length=481, Percent_Identity=44.6985446985447, Blast_Score=348, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6324923, Length=483, Percent_Identity=43.6853002070393, Blast_Score=345, Evalue=1e-95, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=47.6482617586912, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=47.6482617586912, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24648966, Length=446, Percent_Identity=46.1883408071749, Blast_Score=345, Evalue=3e-95, Organism=Drosophila melanogaster, GI24581235, Length=481, Percent_Identity=35.1351351351351, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24646914, Length=274, Percent_Identity=46.7153284671533, Blast_Score=211, Evalue=7e-55,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50528; Mature: 50528
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVMAKTGQN CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC AGILLDTKGPEIRTMKLEGGKDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIG CCEEEECCCCCEEEEEECCCCCEEEEECCEEEEECCCHHCCCCCEEEEEEECCEECEEEC NTVLVDDGLIGMEVTNVTESEVICKVLNSGDLGENKGVNLPGVSIQLPALAEKDKRDLIF CEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE GCEQGVDFVAASFIRKRSDVLEIREHLKAHGGSQIQIISKIENQEGLNNFDEILEASDGI ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCE MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCCCCCCCCHHHHHH AILDGTDAVMLSGESAKGKYPLEAVTIMATICERTDRVMPSRIDSLHDNRKLRITEAVCR HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHH GAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALTTNETTAHQLILTKGVIPQMV HHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCHHHEEHHHCHHHHHH KEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECEECCCCCCCCCEEEEC >Mature Secondary Structure MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVMAKTGQN CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC AGILLDTKGPEIRTMKLEGGKDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIG CCEEEECCCCCEEEEEECCCCCEEEEECCEEEEECCCHHCCCCCEEEEEEECCEECEEEC NTVLVDDGLIGMEVTNVTESEVICKVLNSGDLGENKGVNLPGVSIQLPALAEKDKRDLIF CEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE GCEQGVDFVAASFIRKRSDVLEIREHLKAHGGSQIQIISKIENQEGLNNFDEILEASDGI ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCE MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVAN EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCCCCCCCCHHHHHH AILDGTDAVMLSGESAKGKYPLEAVTIMATICERTDRVMPSRIDSLHDNRKLRITEAVCR HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHH GAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALTTNETTAHQLILTKGVIPQMV HHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCHHHEEHHHCHHHHHH KEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]