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The map label for this gene is ydiK [H]

Identifier: 157370415

GI number: 157370415

Start: 2374573

End: 2375673

Strand: Reverse

Name: ydiK [H]

Synonym: Spro_2175

Alternate gene names: 157370415

Gene position: 2375673-2374573 (Counterclockwise)

Preceding gene: 157370418

Following gene: 157370413

Centisome position: 43.6

GC content: 57.77

Gene sequence:

>1101_bases
ATGACAATCCCGAAATCCCGCTATGATTTGCCACGGATTATTTTTGGCGTGCTGTTTATCGCCATAATGATCGTCGCCTG
TTTTTGGGTCATTCAACCTTTTATTCTCGGTTTTGCCTGGGCCGGCATGGTGGTCATAGCCACCTGGCCACTGCTGATTA
AGCTGCAAAAAATACTTTGGGGACGGCGTTCACTGGCGGTGCTGGTGATGACGATACTGCTGATCCTGCTGTTTATCCTG
CCAATCTCTCTGCTGGTCAGTAGCGTGGTGGACAACAGCGCGCCAATCGTGGCCTGGGCCAGCACGCCGGGCAAACTGCA
TATTCCCGATCTGGCCTGGCTGCAATCGATCCCGATGATCGGCGATAAGGTCTATCACAGTTACCACACCCTGGTGAACG
CCGGTGGCAGTGCGTTGGTGGCGAAGGTGCAACCTTACTTCGGCCAGACCGCCACCTGGTTCGTGGCACAGGCCGCGCAT
ATTGGCCGCCTGCTGCTGCATTGCACATTGATGCTGCTGTTTAGCGTGTTGCTGTATGCACGCGGCGAGCAAGTGGCTCT
GGGCATTCGCCACTTCGCAACACGTTTGGGTGCAGAAAGAGGCGACGCCGCCGTGGTACTGGGTGGTCAGGCGATCCGCG
CGGTGGCGCTGGGCGTGGTGGTGACGGCGCTGGTGCAGTCGGTACTGGGCGGTATTGGCCTGGCGGTGACCGGCATACCT
GCCGCTACCCTGCTGACGGTATTGATCTTTATCTGCTGCGTGGCACAGTTGGGGCCATTACTGGTGCTGGTACCGGCAAT
CATCTGGTTGTACTGGAGTGGAGATACCACCTGGGGCACCGTGCTGTTGGTATGGAGCTGCGTGGTCGCCACGCTCGATA
ACGTGCTGCGGCCAGTGCTAATCCGCATGGGTGCCGATCTGCCGATGATCCTGATCCTGTCCGGTGTGATCGGCGGCTTA
CTGGCTTTCGGCATGATTGGCCTGTTTATCGGCCCGGTGGTGTTGGCGGTGTCTTACCGTTTGCTCACTGCCTGGATGAA
TGAAGCGCCAGAACCGACTGCCGACCTGGAAGAAGTGGCCAAAGATCTGGAACAGATGTAA

Upstream 100 bases:

>100_bases
TCGCTCGCAACAAAAGGTGCGCCGTGCTGTCGTTTTTCATCAACGTGCACCATGATTAAACGATCCCAAGGAGTTAACTG
ACCAGAATGAGAACCCATTC

Downstream 100 bases:

>100_bases
CCCCGTTTCTGCCCGGGTCACCGGGCAGAACTCCCCTTTCCCCTCGCTTGCTTCCAGAATTAGATCGTCCGCAATAATAA
AATTCACCGCCGGTTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTIPKSRYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILWGRRSLAVLVMTILLILLFIL
PISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMIGDKVYHSYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAH
IGRLLLHCTLMLLFSVLLYARGEQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIP
AATLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATLDNVLRPVLIRMGADLPMILILSGVIGGL
LAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEEVAKDLEQM

Sequences:

>Translated_366_residues
MTIPKSRYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILWGRRSLAVLVMTILLILLFIL
PISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMIGDKVYHSYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAH
IGRLLLHCTLMLLFSVLLYARGEQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIP
AATLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATLDNVLRPVLIRMGADLPMILILSGVIGGL
LAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEEVAKDLEQM
>Mature_365_residues
TIPKSRYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILWGRRSLAVLVMTILLILLFILP
ISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMIGDKVYHSYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAHI
GRLLLHCTLMLLFSVLLYARGEQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIPA
ATLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATLDNVLRPVLIRMGADLPMILILSGVIGGLL
AFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEEVAKDLEQM

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=349, Percent_Identity=71.0601719197708, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39413; Mature: 39282

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPKSRYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRRSLAVLVMTILLILLFILPISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHCCHH
GDKVYHSYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAHIGRLLLHCTLMLLFSVLLYA
HHHHHHHHHHHHHCCCCHHHHECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIP
CCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
AATLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATLDNVLRPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEEVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
KDLEQM
HHHHCC
>Mature Secondary Structure 
TIPKSRYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRRSLAVLVMTILLILLFILPISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHCCHH
GDKVYHSYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAHIGRLLLHCTLMLLFSVLLYA
HHHHHHHHHHHHHCCCCHHHHECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIP
CCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
AATLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATLDNVLRPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEEVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
KDLEQM
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]