| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ydiA [C]
Identifier: 157370413
GI number: 157370413
Start: 2370367
End: 2371245
Strand: Reverse
Name: ydiA [C]
Synonym: Spro_2173
Alternate gene names: 157370413
Gene position: 2371245-2370367 (Counterclockwise)
Preceding gene: 157370415
Following gene: 157370412
Centisome position: 43.52
GC content: 55.4
Gene sequence:
>879_bases ATGATAAGGGCCAGCAGACGTGATAATGACGTCACTATTTCAGCTAAGGAGCCCCGGGTGGAAAGAAGCGTTTTTTATAT TTCGGACGGTACGGCGATCACCGCAGAGGTTTTGGGCCACGCGGTGTTGTCGCAATTTCCGGTCAAGGCCACCACCTTTA CGCTGCCCTTTGTGGAAACCGAAGCGCGGGCCCGTGGGGTTTGCCAGCAGATTAACGATATCTATCGTGATACCGGCGTG CGCCCGTTAGTATTTTACTCAATCATTTCGCCAGAAGTTCGCAAAGTCATTACCCAGAGCGAAGGTTTCTGCCAGGACAT CGTGCAGGCGCTGGTTGGCCCGTTGCAGGGGGAACTGGAGGTAGAACCTACCCCGGTGCCTAACCGCACCCACGGGTTGA CCGCCAGCAACCTCGGCAAATATGACGCCCGTATCGCGGCTATTGACTACACGTTAGCCCATGATGACGGCATTTCGCTG CGTAATCTCGATCAGGCGCAGGTGATCTTGCTCGGCGTTTCGCGCTGTGGTAAGACTCCCACCAGCCTGTATCTGGCCAT GCAGTTTGGTATCCGCGCGGCCAACTATCCGTTTACCGCCGACGATATGGACAACTTGCACCTCCCCGCCGCGCTGAAGC CGTTTCAGCACAAGCTTTTCGGCCTGACGATCGATCCGGAGCGGTTAGCCGCCATCCGTGAAGAACGGCGTGAAAACAGC CGTTATGCTTCCATTCGCCAGTGCCGGATGGAGCTAGCGGAAGTGGAAGCGCTGTTCCGTAAAAACCAGATCCGTTATCT GAACACCACCAATTATTCGGTGGAAGAGATCTCGACCAAAATCCTGGATATTCTGGGCATGAGCCGCCGCATGTTCTAG
Upstream 100 bases:
>100_bases ACCGGCGTTTATTCCCTGACCGACCTGTTTATTCATCGACTCTGCCCGCATTATCACAATTTTTTTGCCCGCCCCTTTAC CGTTGAATCATCTGCAGCCC
Downstream 100 bases:
>100_bases CCTTAACGCGGCGGGCCTGTCTCCTGCCGCGTGTTGTTTATTTCCCCACCGGCCACGTTTTTTGTGCTTTTTTTAGCGAT TTTGATCAACAGAACACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MIRASRRDNDVTISAKEPRVERSVFYISDGTAITAEVLGHAVLSQFPVKATTFTLPFVETEARARGVCQQINDIYRDTGV RPLVFYSIISPEVRKVITQSEGFCQDIVQALVGPLQGELEVEPTPVPNRTHGLTASNLGKYDARIAAIDYTLAHDDGISL RNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFTADDMDNLHLPAALKPFQHKLFGLTIDPERLAAIREERRENS RYASIRQCRMELAEVEALFRKNQIRYLNTTNYSVEEISTKILDILGMSRRMF
Sequences:
>Translated_292_residues MIRASRRDNDVTISAKEPRVERSVFYISDGTAITAEVLGHAVLSQFPVKATTFTLPFVETEARARGVCQQINDIYRDTGV RPLVFYSIISPEVRKVITQSEGFCQDIVQALVGPLQGELEVEPTPVPNRTHGLTASNLGKYDARIAAIDYTLAHDDGISL RNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFTADDMDNLHLPAALKPFQHKLFGLTIDPERLAAIREERRENS RYASIRQCRMELAEVEALFRKNQIRYLNTTNYSVEEISTKILDILGMSRRMF >Mature_292_residues MIRASRRDNDVTISAKEPRVERSVFYISDGTAITAEVLGHAVLSQFPVKATTFTLPFVETEARARGVCQQINDIYRDTGV RPLVFYSIISPEVRKVITQSEGFCQDIVQALVGPLQGELEVEPTPVPNRTHGLTASNLGKYDARIAAIDYTLAHDDGISL RNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFTADDMDNLHLPAALKPFQHKLFGLTIDPERLAAIREERRENS RYASIRQCRMELAEVEALFRKNQIRYLNTTNYSVEEISTKILDILGMSRRMF
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]
Homologues:
Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=81.3186813186813, Blast_Score=473, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005177 [H]
Pfam domain/function: PF03618 DUF299 [H]
EC number: NA
Molecular weight: Translated: 32825; Mature: 32825
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRASRRDNDVTISAKEPRVERSVFYISDGTAITAEVLGHAVLSQFPVKATTFTLPFVET CCCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH EARARGVCQQINDIYRDTGVRPLVFYSIISPEVRKVITQSEGFCQDIVQALVGPLQGELE HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE VEPTPVPNRTHGLTASNLGKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTP ECCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEHHHCCCCC TSLYLAMQFGIRAANYPFTADDMDNLHLPAALKPFQHKLFGLTIDPERLAAIREERRENS HHEEEEEECCCEECCCCCCCCCCCCCCCCHHHCCHHHHHEEEEECHHHHHHHHHHHHHHH RYASIRQCRMELAEVEALFRKNQIRYLNTTNYSVEEISTKILDILGMSRRMF HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRASRRDNDVTISAKEPRVERSVFYISDGTAITAEVLGHAVLSQFPVKATTFTLPFVET CCCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH EARARGVCQQINDIYRDTGVRPLVFYSIISPEVRKVITQSEGFCQDIVQALVGPLQGELE HHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE VEPTPVPNRTHGLTASNLGKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTP ECCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEHHHCCCCC TSLYLAMQFGIRAANYPFTADDMDNLHLPAALKPFQHKLFGLTIDPERLAAIREERRENS HHEEEEEECCCEECCCCCCCCCCCCCCCCHHHCCHHHHHEEEEECHHHHHHHHHHHHHHH RYASIRQCRMELAEVEALFRKNQIRYLNTTNYSVEEISTKILDILGMSRRMF HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA