| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is btuD [H]
Identifier: 157370393
GI number: 157370393
Start: 2348996
End: 2349751
Strand: Direct
Name: btuD [H]
Synonym: Spro_2153
Alternate gene names: 157370393
Gene position: 2348996-2349751 (Clockwise)
Preceding gene: 157370392
Following gene: 157370394
Centisome position: 43.11
GC content: 57.8
Gene sequence:
>756_bases ATGCTGCAACTCAGTCAGGTTGGGGTAGAAGGGCGTCTGGCCCCATTTTCAGCACAGGTCGATGCTGGGTTGCAGTTTCA CCTTATTGGTCCGAACGGTGCCGGCAAAAGTACACTGCTGGCGTGTTTGGCAGGCATGCTGCCTGGCACGGGCGAGATCC GGCTGGCAGACCAGCCGCTGGCGGGTTATCAGGGCAATGAACTGGCTCTGCGCCGTGCTTATTTAAGCCAGCAACAGCCG CCAGTGGCGCTGATGCCGGTATTCCAGTATCTGGAACTGCACCGGCCTGCAGGTAGCACGGAACAGGCGCTGGAGAGCAC TATTGTTTATCTGTGCCAGCGTTTTAAACTGATGGACAAGCTGCCGCGCATGCTGACTCAGTTGTCCGGCGGTGAATGGC AGCGGGTGCGGCTGGCCGCGGTATTACTGCAGGTTTGGCCGACGGTCAATCCTTACAGCCAACTGCTGCTACTGGATGAA CCGACCAATAGCCTGGACGTGGCGCAAAAAGTAGCGCTGGATCGGTTACTGCGGGAGTTTTGTCAGAGTGGACGTAGCGC GTTGGTTTGCGCGCACGACCTTAATCATACCTTGCAGCAGGCCGATCGGGTCTGGTTGCTGCATGCCGGGCGTCTTGTCG CGCAGGGAACCACGCGGGAAGTGATGGAGCCGGTATTGCTTTCACAGATCTATGACGTGGATTTTCACCTGCAGGCGGTA GGCGATCAACGCTGGATTATGACCAGGACGGCATAA
Upstream 100 bases:
>100_bases CAACGTTTCTCTCCGGATATGACACCGGAAGATCCTGCGTTGGTGGCCGCCGTCAAACAGGCGTTGGCCAAGTAATATAA AGAAGGAGCGATAATTCATA
Downstream 100 bases:
>100_bases TGCGTTAGCGCATTGAAAATGCGACTTAAACGAAAAATAAACGGACCTGATATAAATAGCCGGATAACGACCGGCTTTAT TTCCCCTTGCTTCCCAAAAA
Product: vitamin B12-transporter ATPase
Products: NA
Alternate protein names: Vitamin B12-transporting ATPase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLQLSQVGVEGRLAPFSAQVDAGLQFHLIGPNGAGKSTLLACLAGMLPGTGEIRLADQPLAGYQGNELALRRAYLSQQQP PVALMPVFQYLELHRPAGSTEQALESTIVYLCQRFKLMDKLPRMLTQLSGGEWQRVRLAAVLLQVWPTVNPYSQLLLLDE PTNSLDVAQKVALDRLLREFCQSGRSALVCAHDLNHTLQQADRVWLLHAGRLVAQGTTREVMEPVLLSQIYDVDFHLQAV GDQRWIMTRTA
Sequences:
>Translated_251_residues MLQLSQVGVEGRLAPFSAQVDAGLQFHLIGPNGAGKSTLLACLAGMLPGTGEIRLADQPLAGYQGNELALRRAYLSQQQP PVALMPVFQYLELHRPAGSTEQALESTIVYLCQRFKLMDKLPRMLTQLSGGEWQRVRLAAVLLQVWPTVNPYSQLLLLDE PTNSLDVAQKVALDRLLREFCQSGRSALVCAHDLNHTLQQADRVWLLHAGRLVAQGTTREVMEPVLLSQIYDVDFHLQAV GDQRWIMTRTA >Mature_251_residues MLQLSQVGVEGRLAPFSAQVDAGLQFHLIGPNGAGKSTLLACLAGMLPGTGEIRLADQPLAGYQGNELALRRAYLSQQQP PVALMPVFQYLELHRPAGSTEQALESTIVYLCQRFKLMDKLPRMLTQLSGGEWQRVRLAAVLLQVWPTVNPYSQLLLLDE PTNSLDVAQKVALDRLLREFCQSGRSALVCAHDLNHTLQQADRVWLLHAGRLVAQGTTREVMEPVLLSQIYDVDFHLQAV GDQRWIMTRTA
Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system [H]
COG id: COG4138
COG function: function code H; ABC-type cobalamin transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1788002, Length=248, Percent_Identity=50, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI1790739, Length=237, Percent_Identity=32.9113924050633, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=35.042735042735, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786803, Length=223, Percent_Identity=29.5964125560538, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994943, Length=209, Percent_Identity=29.1866028708134, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1788506, Length=225, Percent_Identity=31.5555555555556, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789873, Length=203, Percent_Identity=32.0197044334975, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=28.6343612334802, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786253, Length=214, Percent_Identity=30.8411214953271, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=34.1584158415842, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=29.5238095238095, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789864, Length=214, Percent_Identity=26.6355140186916, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789991, Length=239, Percent_Identity=28.0334728033473, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786654, Length=204, Percent_Identity=34.3137254901961, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1789751, Length=188, Percent_Identity=35.6382978723404, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787029, Length=199, Percent_Identity=26.1306532663317, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=218, Percent_Identity=33.4862385321101, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=30.1369863013699, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787759, Length=247, Percent_Identity=27.9352226720648, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=29.8076923076923, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI48994883, Length=227, Percent_Identity=29.5154185022026, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1787143, Length=216, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=29.3577981651376, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=31.1627906976744, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786398, Length=216, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786563, Length=217, Percent_Identity=29.9539170506912, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788225, Length=216, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787547, Length=220, Percent_Identity=27.7272727272727, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=26.6666666666667, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1789962, Length=220, Percent_Identity=28.6363636363636, Blast_Score=61, Evalue=7e-11, Organism=Escherichia coli, GI1789032, Length=227, Percent_Identity=26.431718061674, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193202349, Length=223, Percent_Identity=27.3542600896861, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211017, Length=218, Percent_Identity=30.2752293577982, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211015, Length=218, Percent_Identity=30.2752293577982, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71992285, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17541710, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71996809, Length=218, Percent_Identity=30.2752293577982, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25146777, Length=221, Percent_Identity=27.6018099547511, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI212646699, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983516, Length=227, Percent_Identity=28.1938325991189, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983510, Length=227, Percent_Identity=28.1938325991189, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983523, Length=227, Percent_Identity=28.1938325991189, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=8e-14, Organism=Drosophila melanogaster, GI24641565, Length=251, Percent_Identity=29.4820717131474, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI85726357, Length=220, Percent_Identity=27.7272727272727, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136662, Length=214, Percent_Identity=28.0373831775701, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=223, Percent_Identity=29.1479820627803, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281363262, Length=225, Percent_Identity=29.7777777777778, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24653245, Length=225, Percent_Identity=29.7777777777778, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.33 [H]
Molecular weight: Translated: 27848; Mature: 27848
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLSQVGVEGRLAPFSAQVDAGLQFHLIGPNGAGKSTLLACLAGMLPGTGEIRLADQPL CCCCHHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCC AGYQGNELALRRAYLSQQQPPVALMPVFQYLELHRPAGSTEQALESTIVYLCQRFKLMDK CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LPRMLTQLSGGEWQRVRLAAVLLQVWPTVNPYSQLLLLDEPTNSLDVAQKVALDRLLREF HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH CQSGRSALVCAHDLNHTLQQADRVWLLHAGRLVAQGTTREVMEPVLLSQIYDVDFHLQAV HHCCCCEEEEHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHHHHHCCCEEEEEE GDQRWIMTRTA CCCEEEEEECC >Mature Secondary Structure MLQLSQVGVEGRLAPFSAQVDAGLQFHLIGPNGAGKSTLLACLAGMLPGTGEIRLADQPL CCCCHHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCC AGYQGNELALRRAYLSQQQPPVALMPVFQYLELHRPAGSTEQALESTIVYLCQRFKLMDK CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LPRMLTQLSGGEWQRVRLAAVLLQVWPTVNPYSQLLLLDEPTNSLDVAQKVALDRLLREF HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH CQSGRSALVCAHDLNHTLQQADRVWLLHAGRLVAQGTTREVMEPVLLSQIYDVDFHLQAV HHCCCCEEEEHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHHHHHCCCEEEEEE GDQRWIMTRTA CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA