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The map label for this gene is ycaC [H]

Identifier: 157370304

GI number: 157370304

Start: 2253968

End: 2254648

Strand: Reverse

Name: ycaC [H]

Synonym: Spro_2062

Alternate gene names: 157370304

Gene position: 2254648-2253968 (Counterclockwise)

Preceding gene: 157370306

Following gene: 157370302

Centisome position: 41.38

GC content: 54.33

Gene sequence:

>681_bases
ATGAGCACTCCAGCAAACTTTAATGGCCAGCGTCCTGTTATTGATGCTAATGACGCGGTCATGTTGTTGATTGACCACCA
GAGTGGCCTGTTCCAAACCGTCGGCGATATGCCAATGACGGAACTGCGCGCTCGCGCTGGTGCCCTGGCCAGTATCGCTA
CGCTTAGCAAGTTGCCGGTCATTACCACTGCATCAGTACCGCAAGGTCCGAATGGCCCTTTGATCCCTGAGATCCACCAA
AATGCCCCGCATGCGCAATATGTGGCGCGCAAAGGTGAGATCAACGCCTGGGATAACCCGGACTTTGTTGCAGCCGTTAA
AGCGACCGGCCGCAAAACTCTGATTATCGCCGGTACCATCACCAGTGTTTGCATGGCCTTCCCGTCGATCAGCGCCGTTG
CCGAAGGCTATAAAGTCTTTGCCGTTATCGACGCCTCGGGTACCTATTCGAAAATGGCGCAGGAAATTACCCTGGCGCGT
GTGGTGCAGGCAGGTGTGGTACCGATCGATACCGCCGGCGTGGCCTCTGAACTTCAGGGCAGCTGGAATCGCGAGGATGC
ACAACAATGGGCCGAGGTTTACACCAAAATCTTCCCTGCGTATCAACTGCTGATTGAAAGCTACGTTAAAGCCCAGGACG
TAGTGAAAAATAACGAAGTGCTGGATTCCCAGCGCGACTAA

Upstream 100 bases:

>100_bases
GAATTTTCCCCTGCCCCTACACTGTTTCCAAACACTAAGATTACATCTTGGTTAGGCAGCATTAATTGTTTTCAACGTCC
CGATTACAGAGGAATAAAAG

Downstream 100 bases:

>100_bases
CGCTCCTGCTCTGGCTGGTCTGCTTCCCCCTGGGCCAGCCCTGTTCACCTGAGCAATATGCATAAAAAAACCCCGGCTTT
CGGCCAGGGTCATCAATGTT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSTPANFNGQRPVIDANDAVMLLIDHQSGLFQTVGDMPMTELRARAGALASIATLSKLPVITTASVPQGPNGPLIPEIHQ
NAPHAQYVARKGEINAWDNPDFVAAVKATGRKTLIIAGTITSVCMAFPSISAVAEGYKVFAVIDASGTYSKMAQEITLAR
VVQAGVVPIDTAGVASELQGSWNREDAQQWAEVYTKIFPAYQLLIESYVKAQDVVKNNEVLDSQRD

Sequences:

>Translated_226_residues
MSTPANFNGQRPVIDANDAVMLLIDHQSGLFQTVGDMPMTELRARAGALASIATLSKLPVITTASVPQGPNGPLIPEIHQ
NAPHAQYVARKGEINAWDNPDFVAAVKATGRKTLIIAGTITSVCMAFPSISAVAEGYKVFAVIDASGTYSKMAQEITLAR
VVQAGVVPIDTAGVASELQGSWNREDAQQWAEVYTKIFPAYQLLIESYVKAQDVVKNNEVLDSQRD
>Mature_225_residues
STPANFNGQRPVIDANDAVMLLIDHQSGLFQTVGDMPMTELRARAGALASIATLSKLPVITTASVPQGPNGPLIPEIHQN
APHAQYVARKGEINAWDNPDFVAAVKATGRKTLIIAGTITSVCMAFPSISAVAEGYKVFAVIDASGTYSKMAQEITLARV
VQAGVVPIDTAGVASELQGSWNREDAQQWAEVYTKIFPAYQLLIESYVKAQDVVKNNEVLDSQRD

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=195, Percent_Identity=46.6666666666667, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24226; Mature: 24095

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPANFNGQRPVIDANDAVMLLIDHQSGLFQTVGDMPMTELRARAGALASIATLSKLPV
CCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCE
ITTASVPQGPNGPLIPEIHQNAPHAQYVARKGEINAWDNPDFVAAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEHHH
TSVCMAFPSISAVAEGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPIDTAGVASELQG
HHHHHHCCCHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHCC
SWNREDAQQWAEVYTKIFPAYQLLIESYVKAQDVVKNNEVLDSQRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STPANFNGQRPVIDANDAVMLLIDHQSGLFQTVGDMPMTELRARAGALASIATLSKLPV
CCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCE
ITTASVPQGPNGPLIPEIHQNAPHAQYVARKGEINAWDNPDFVAAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEHHH
TSVCMAFPSISAVAEGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPIDTAGVASELQG
HHHHHHCCCHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHCC
SWNREDAQQWAEVYTKIFPAYQLLIESYVKAQDVVKNNEVLDSQRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]