Click here to switch to the map view.

The map label for this gene is nohA [H]

Identifier: 157370283

GI number: 157370283

Start: 2235519

End: 2236073

Strand: Direct

Name: nohA [H]

Synonym: Spro_2041

Alternate gene names: 157370283

Gene position: 2235519-2236073 (Clockwise)

Preceding gene: 157370282

Following gene: 157370284

Centisome position: 41.03

GC content: 52.79

Gene sequence:

>555_bases
ATGAATGTAACAAAGGCACAACTGGCGGATCTCTTCGAAGTTTCAACGCGCACGATCACCACATGGCAATCGCAAGGAAT
GCCGGTAGTGGCCGGCGAGGGGAACGGCGGTAAAGGCGGGGAAAATACCTATTCGACAAAGGGCGTTATTACCTGGTACG
CCGACCGCGAGGCCTCGCTAGAAAACGAGATATTGCGTAAAGAGCTGGACGCCCTGCAGCAAAGCGGGGATGAGGCCTTG
CAGCCCGGCACTATCGATTATGAGCGCTACCGTTTAACCCGTGCTCAGGCCGACGGCCAGGAATTAAAGAATGCTAAAGA
CTCCGCCGAGGTAGTGGAAACCGGCTTCTGCATGTTTGTCCTGTCAAAGGTTGCGGGGGAGATTGCCGGCATTCTTGACG
GCATTCCTCTCTCAATGCAGCGGCGCTTTCCTGAACTGGAAAATCGGCATATCGAATTTTTAAAGCGGGATGTGGTGAAA
GCCATGAATAAAGCGGCTGCGCTGGATGAAATTCTTCCGGGGTTGCTGAATGAGTATATCGAACAAACGGATTGA

Upstream 100 bases:

>100_bases
TAGCCAGAGCGGGAAGTGATCCTATCGAGATCCTCTCGATTTTCGGGAAATCACTTCCCGGTTAAAAAAATGTTAATAAA
AAGGAGTTTCGGGGGGATTT

Downstream 100 bases:

>100_bases
TCGGCTGCGTTATTGGGTTGCCGCCGGTCTGCGTTCGCTATTCCGCCCCGTTCCTATGACGGCGGTCGAATGGGCTAACG
AATTTTATTACCTCCCCAAA

Product: DNA packaging Nu1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNVTKAQLADLFEVSTRTITTWQSQGMPVVAGEGNGGKGGENTYSTKGVITWYADREASLENEILRKELDALQQSGDEAL
QPGTIDYERYRLTRAQADGQELKNAKDSAEVVETGFCMFVLSKVAGEIAGILDGIPLSMQRRFPELENRHIEFLKRDVVK
AMNKAAALDEILPGLLNEYIEQTD

Sequences:

>Translated_184_residues
MNVTKAQLADLFEVSTRTITTWQSQGMPVVAGEGNGGKGGENTYSTKGVITWYADREASLENEILRKELDALQQSGDEAL
QPGTIDYERYRLTRAQADGQELKNAKDSAEVVETGFCMFVLSKVAGEIAGILDGIPLSMQRRFPELENRHIEFLKRDVVK
AMNKAAALDEILPGLLNEYIEQTD
>Mature_184_residues
MNVTKAQLADLFEVSTRTITTWQSQGMPVVAGEGNGGKGGENTYSTKGVITWYADREASLENEILRKELDALQQSGDEAL
QPGTIDYERYRLTRAQADGQELKNAKDSAEVVETGFCMFVLSKVAGEIAGILDGIPLSMQRRFPELENRHIEFLKRDVVK
AMNKAAALDEILPGLLNEYIEQTD

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda DNA packaging protein NU1 [H]

Homologues:

Organism=Escherichia coli, GI1786773, Length=183, Percent_Identity=69.3989071038251, Blast_Score=271, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010906
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07471 Phage_Nu1 [H]

EC number: NA

Molecular weight: Translated: 20371; Mature: 20371

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTKAQLADLFEVSTRTITTWQSQGMPVVAGEGNGGKGGENTYSTKGVITWYADREASL
CCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHH
ENEILRKELDALQQSGDEALQPGTIDYERYRLTRAQADGQELKNAKDSAEVVETGFCMFV
HHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHH
LSKVAGEIAGILDGIPLSMQRRFPELENRHIEFLKRDVVKAMNKAAALDEILPGLLNEYI
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQTD
HHCC
>Mature Secondary Structure
MNVTKAQLADLFEVSTRTITTWQSQGMPVVAGEGNGGKGGENTYSTKGVITWYADREASL
CCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHH
ENEILRKELDALQQSGDEALQPGTIDYERYRLTRAQADGQELKNAKDSAEVVETGFCMFV
HHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHH
LSKVAGEIAGILDGIPLSMQRRFPELENRHIEFLKRDVVKAMNKAAALDEILPGLLNEYI
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQTD
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1630906 [H]