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The map label for this gene is holE [H]

Identifier: 157370282

GI number: 157370282

Start: 2234415

End: 2234675

Strand: Direct

Name: holE [H]

Synonym: Spro_2040

Alternate gene names: 157370282

Gene position: 2234415-2234675 (Clockwise)

Preceding gene: 157370281

Following gene: 157370283

Centisome position: 41.01

GC content: 50.96

Gene sequence:

>261_bases
ATGACCAAATCATTCAACCTTGCCAACCTCTCTAAAGAGGACATGGACAAGACAAACGTAGACTTGGCGGCATCAGGCGT
AGCGTACAAAGAGCGCATGAACCAGCCAGTGATAGCTGACCAAGTTGAGCTAGTGCAACCTGAGCATCTACGTGGATACA
TCTGTGAGCGTGTGGCGCATTACCGAGATGTGAGCAAAAGGCTACCTACCGGATCCGCGCCGGTATATCTGCAAATGGCT
GAGGCCAACGGTAAGAAGTAG

Upstream 100 bases:

>100_bases
ATATAACTGCCTTCGGGCGGTTTTATTATTAACCATCACAGAGGTGTTTTCCGAGGCCTCTGTGTGATGATGTATAATCC
TCCCCAACAGGAGGATCCCC

Downstream 100 bases:

>100_bases
ATTTGAAATAGTTGTAATTTATATTGTTATTATTAGTGATTATTTAAATGATTCTTAAAAAATTTTCAAAGTATGTCATC
CCCGGGTTCACTATGATGCT

Product: DNA polymerase II subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTKSFNLANLSKEDMDKTNVDLAASGVAYKERMNQPVIADQVELVQPEHLRGYICERVAHYRDVSKRLPTGSAPVYLQMA
EANGKK

Sequences:

>Translated_86_residues
MTKSFNLANLSKEDMDKTNVDLAASGVAYKERMNQPVIADQVELVQPEHLRGYICERVAHYRDVSKRLPTGSAPVYLQMA
EANGKK
>Mature_85_residues
TKSFNLANLSKEDMDKTNVDLAASGVAYKERMNQPVIADQVELVQPEHLRGYICERVAHYRDVSKRLPTGSAPVYLQMAE
ANGKK

Specific function: The exact function of the theta subunit is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788147, Length=67, Percent_Identity=58.2089552238806, Blast_Score=76, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009052
- InterPro:   IPR011325
- ProDom:   PD057609 [H]

Pfam domain/function: PF06440 DNA_pol3_theta [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 9638; Mature: 9507

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSFNLANLSKEDMDKTNVDLAASGVAYKERMNQPVIADQVELVQPEHLRGYICERVAH
CCCCCCCCCCCHHHCCCCCCCHHCCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH
YRDVSKRLPTGSAPVYLQMAEANGKK
HHHHHHHCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
TKSFNLANLSKEDMDKTNVDLAASGVAYKERMNQPVIADQVELVQPEHLRGYICERVAH
CCCCCCCCCCHHHCCCCCCCHHCCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH
YRDVSKRLPTGSAPVYLQMAEANGKK
HHHHHHHCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]