| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hemA
Identifier: 157370231
GI number: 157370231
Start: 2177050
End: 2178312
Strand: Direct
Name: hemA
Synonym: Spro_1989
Alternate gene names: 157370231
Gene position: 2177050-2178312 (Clockwise)
Preceding gene: 157370227
Following gene: 157370232
Centisome position: 39.95
GC content: 58.75
Gene sequence:
>1263_bases ATGACCCTGCTGGCGTTAGGTATAAATCACAAAACCGCTCCGGTTTCTCTGCGTGAAAGGGTGACCTTCTCCCCAGAGTC TATCGAACAGGCGCTAACCAGCTTGCTCCAACAACCGTTGGTGCAGGGCGGTGTCGTGTTGTCTACCTGCAACCGCACCG AGCTGTATCTTAGCGTGGAGCAACAGGAACATATTCACGAACAGCTGGTCTCCTGGCTGTGTGAGTACCACCACCTGCGC CCGGAAGAGGTGAGTAAAAGCCTGTACTGGCACCACGGCAACGAAGCCGTTAGCCACCTGATGCGCGTGGCCAGCGGGTT GGATTCACTGGTGCTGGGCGAACCGCAAATTCTTGGGCAGGTGAAGAAAGCCTTTGCCGAGTCCCAACGCGGGCAGTCAC TGTCTGGTGAGCTTGAGCGCCTGTTCCAAAAATCCTTCTCCGTCGCCAAACGCGTACGTACCGAAACCGAAATCGGCGCC AGTGCGGTATCCGTGGCCTTTGCCGCCTGTACCCTGGCACGCCAGATATTCGAATCTCTTGCCGAACTGAACGTCCTGTT GGTGGGGGCCGGTGAAACCATTGAACTGGTGGCGCGTCATCTGCGCGAGCATAAAGTACGGCATATGATTATTGCCAACC GTACCCGCGAGCGCGCCCAGCTGCTGGCGGACGAAGTCGGCGCAGAAGTGATCACCTTGCCGGAAATCGACGAACGCCTG GCGGACGCCGACATTATTATCAGTTCTACCGCCAGCCCACTGCCGATCATCGGTAAAGGGATGGTGGAGCGAGCGCTGAA AGCGCGCCGCAACCAGCCAATGCTGCTGGTGGATATTGCCGTACCGCGCGATATCGAACCGGAAGTGGGCAAGCTGGCTA ACGCCTATTTATATAGCGTGGACGATCTGCACGCCATCATTCAGAGCAACCTGGCGCAGCGCAAGGCCGCGGCGGTGCAG GCTGAGTCTATCGTCCAGCAGGAAAGCATCAACTTTATGGCCTGGTTGCGCTCGCAGGGCGCAGTGGAAACCATCCGCGA CTACCGTTCGCAGGCCGATCAGATCCGTGCGGAAATGGAAGCCAAAGCCCTGGCCGCCATTGCGCAGGGCGCGGACGTGG AGCAGGTTATCCACGAGCTGGCCCACCGGCTGACCAACCGTCTTATTCATGCCCCTACCAAATCCCTCCAACAGGCCGCC GGCGATGGCGACGTGGAGCGGTTGCAATTATTACGCGACAGCCTCGGGCTGGATCAGCATTAG
Upstream 100 bases:
>100_bases GATTGGACGGAAGATGCGGTTGTGCCTTTTATTGATCCCGCGCATCAAGTAGAATGCCGTTCAACGAGAACCCGTACCAA AAGAAGTATTACTCGAAGCA
Downstream 100 bases:
>100_bases TTTTCTCTTTATTAACAGGGTTTAATACCACGCATGAAGCCTTCTATTGTTGCCAAACTGGAAGCGTTACAAGAGCGCCA TGAAGAAGTGCAGGCGCTGC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTLLALGINHKTAPVSLRERVTFSPESIEQALTSLLQQPLVQGGVVLSTCNRTELYLSVEQQEHIHEQLVSWLCEYHHLR PEEVSKSLYWHHGNEAVSHLMRVASGLDSLVLGEPQILGQVKKAFAESQRGQSLSGELERLFQKSFSVAKRVRTETEIGA SAVSVAFAACTLARQIFESLAELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEVGAEVITLPEIDERL ADADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSVDDLHAIIQSNLAQRKAAAVQ AESIVQQESINFMAWLRSQGAVETIRDYRSQADQIRAEMEAKALAAIAQGADVEQVIHELAHRLTNRLIHAPTKSLQQAA GDGDVERLQLLRDSLGLDQH
Sequences:
>Translated_420_residues MTLLALGINHKTAPVSLRERVTFSPESIEQALTSLLQQPLVQGGVVLSTCNRTELYLSVEQQEHIHEQLVSWLCEYHHLR PEEVSKSLYWHHGNEAVSHLMRVASGLDSLVLGEPQILGQVKKAFAESQRGQSLSGELERLFQKSFSVAKRVRTETEIGA SAVSVAFAACTLARQIFESLAELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEVGAEVITLPEIDERL ADADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSVDDLHAIIQSNLAQRKAAAVQ AESIVQQESINFMAWLRSQGAVETIRDYRSQADQIRAEMEAKALAAIAQGADVEQVIHELAHRLTNRLIHAPTKSLQQAA GDGDVERLQLLRDSLGLDQH >Mature_419_residues TLLALGINHKTAPVSLRERVTFSPESIEQALTSLLQQPLVQGGVVLSTCNRTELYLSVEQQEHIHEQLVSWLCEYHHLRP EEVSKSLYWHHGNEAVSHLMRVASGLDSLVLGEPQILGQVKKAFAESQRGQSLSGELERLFQKSFSVAKRVRTETEIGAS AVSVAFAACTLARQIFESLAELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEVGAEVITLPEIDERLA DADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSVDDLHAIIQSNLAQRKAAAVQA ESIVQQESINFMAWLRSQGAVETIRDYRSQADQIRAEMEAKALAAIAQGADVEQVIHELAHRLTNRLIHAPTKSLQQAAG DGDVERLQLLRDSLGLDQH
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=418, Percent_Identity=79.6650717703349, Blast_Score=667, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_SERP5 (A8GDA2)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001478220.1 - ProteinModelPortal: A8GDA2 - SMR: A8GDA2 - STRING: A8GDA2 - GeneID: 5603230 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1989 - eggNOG: COG0373 - HOGENOM: HBG732626 - OMA: GPILNRL - ProtClustDB: PRK00045 - BioCyc: SPRO399741:SPRO_1989-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR003462 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PANTHER: PTHR13812 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 46453; Mature: 46322
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 50-50 BINDING 109-109 BINDING 120-120
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLALGINHKTAPVSLRERVTFSPESIEQALTSLLQQPLVQGGVVLSTCNRTELYLSVE CEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEH QQEHIHEQLVSWLCEYHHLRPEEVSKSLYWHHGNEAVSHLMRVASGLDSLVLGEPQILGQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHH VKKAFAESQRGQSLSGELERLFQKSFSVAKRVRTETEIGASAVSVAFAACTLARQIFESL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEVGAEVITLPEIDERL HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECCCHHHHH ADADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSV CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH DDLHAIIQSNLAQRKAAAVQAESIVQQESINFMAWLRSQGAVETIRDYRSQADQIRAEME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AKALAAIAQGADVEQVIHELAHRLTNRLIHAPTKSLQQAAGDGDVERLQLLRDSLGLDQH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLLALGINHKTAPVSLRERVTFSPESIEQALTSLLQQPLVQGGVVLSTCNRTELYLSVE EEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEH QQEHIHEQLVSWLCEYHHLRPEEVSKSLYWHHGNEAVSHLMRVASGLDSLVLGEPQILGQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCHHHHHH VKKAFAESQRGQSLSGELERLFQKSFSVAKRVRTETEIGASAVSVAFAACTLARQIFESL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEVGAEVITLPEIDERL HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECCCHHHHH ADADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSV CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH DDLHAIIQSNLAQRKAAAVQAESIVQQESINFMAWLRSQGAVETIRDYRSQADQIRAEME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AKALAAIAQGADVEQVIHELAHRLTNRLIHAPTKSLQQAAGDGDVERLQLLRDSLGLDQH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA