| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yebZ [H]
Identifier: 157370186
GI number: 157370186
Start: 2128181
End: 2129062
Strand: Direct
Name: yebZ [H]
Synonym: Spro_1944
Alternate gene names: 157370186
Gene position: 2128181-2129062 (Clockwise)
Preceding gene: 157370185
Following gene: 157370187
Centisome position: 39.06
GC content: 60.09
Gene sequence:
>882_bases ATGAGTCTGGCGACCCTGTTTGTCCTGTGTCGCTTTGTGCACTTTGCGGCGGTGATGCTGATGTTTGGCACCAGCCTGTT CACCGCCTTATTGTCGCCGCAGCGCCTTTCCCCGTATCTCACCCGTGATGTGCGTCCTTTGTTGGTCTCTTGCACCTGGC TTGCCGGGCTTTCTGCCGTGGCGCTGCTGGCTATTCAGGCCGGGCAGATGGGCGACGGCTGGGCCGATACCTGGCGGCTA GACGTGTGGTGGGCGGTACTGGGCACCACCTTCGGTGAGGTCTGGCGCTGGCATCTGGGCATTTCATTATTGGCGTTGCT GAGCCTGTGGCTGGCAGAACCGCGCCGCACGCAGCTTTTGGCATTGCTTTCCACACTGTTGCTGGTCAGCATGGCATTCA TCGGCCATGCAGCAATGCATGATGGAGGGCTCGGCGTAGCGCATCGTTTTAACCACGCACTGCATTTGTTGGCAGCCGGT TACTGGTTTGGCAGCCTGCTGCCGTTGCTGGTTTGCCTGCGTTATCTGGCTCAACCGCAAAGCCGCAGCGATGCGGTCAC CACGCTGATACGCTTCTCGCGTTGGGGCCACCTGGCGGTTGCGCTGGTGGTGTTGACCGGTGTGATCAACAGTTTGATTA TTCTCGGCCGTTGGCCGCTGGATGTCGATTCACCTTACCAGCGCCTGCTGCTGTTCAAAACCGCACTGGTGGCACTGATG GTGATGGTGGCGTTGGCCAACCGTTACGCCATCGTCCCCGCGATGAGCAGCATGCCGCAGTTGGCACAGCGCGGGCTGGT GCTGGCCTGCTGGATTGAAGTGGGGTTGGGCGCGGGCGTGCTGCTGCTGGTCAGTTTATTTGCAACTTATGCGCCGGTGT AA
Upstream 100 bases:
>100_bases GGGCGACCTGGCAGCAGGAAAATATAACGTCAGCTGGCATGTGGTTTCGGTCGACGGTCATAAAACCAAAGGCCAGTACA GCTTCACCGTAAACTAAACC
Downstream 100 bases:
>100_bases CATTGCGGCTTGCCGGATGCCCCCAAACTGCGGGAAAATTGAATCAAATAGCAACCTTAAGGCCACAACATGAAATCGGC ATTACTTGGCATAACGCTGC
Product: copper resistance D domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSLATLFVLCRFVHFAAVMLMFGTSLFTALLSPQRLSPYLTRDVRPLLVSCTWLAGLSAVALLAIQAGQMGDGWADTWRL DVWWAVLGTTFGEVWRWHLGISLLALLSLWLAEPRRTQLLALLSTLLLVSMAFIGHAAMHDGGLGVAHRFNHALHLLAAG YWFGSLLPLLVCLRYLAQPQSRSDAVTTLIRFSRWGHLAVALVVLTGVINSLIILGRWPLDVDSPYQRLLLFKTALVALM VMVALANRYAIVPAMSSMPQLAQRGLVLACWIEVGLGAGVLLLVSLFATYAPV
Sequences:
>Translated_293_residues MSLATLFVLCRFVHFAAVMLMFGTSLFTALLSPQRLSPYLTRDVRPLLVSCTWLAGLSAVALLAIQAGQMGDGWADTWRL DVWWAVLGTTFGEVWRWHLGISLLALLSLWLAEPRRTQLLALLSTLLLVSMAFIGHAAMHDGGLGVAHRFNHALHLLAAG YWFGSLLPLLVCLRYLAQPQSRSDAVTTLIRFSRWGHLAVALVVLTGVINSLIILGRWPLDVDSPYQRLLLFKTALVALM VMVALANRYAIVPAMSSMPQLAQRGLVLACWIEVGLGAGVLLLVSLFATYAPV >Mature_292_residues SLATLFVLCRFVHFAAVMLMFGTSLFTALLSPQRLSPYLTRDVRPLLVSCTWLAGLSAVALLAIQAGQMGDGWADTWRLD VWWAVLGTTFGEVWRWHLGISLLALLSLWLAEPRRTQLLALLSTLLLVSMAFIGHAAMHDGGLGVAHRFNHALHLLAAGY WFGSLLPLLVCLRYLAQPQSRSDAVTTLIRFSRWGHLAVALVVLTGVINSLIILGRWPLDVDSPYQRLLLFKTALVALMV MVALANRYAIVPAMSSMPQLAQRGLVLACWIEVGLGAGVLLLVSLFATYAPV
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CopD family [H]
Homologues:
Organism=Escherichia coli, GI1788145, Length=291, Percent_Identity=38.8316151202749, Blast_Score=181, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 [H]
Pfam domain/function: PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 32114; Mature: 31983
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLATLFVLCRFVHFAAVMLMFGTSLFTALLSPQRLSPYLTRDVRPLLVSCTWLAGLSAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH ALLAIQAGQMGDGWADTWRLDVWWAVLGTTFGEVWRWHLGISLLALLSLWLAEPRRTQLL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALLSTLLLVSMAFIGHAAMHDGGLGVAHRFNHALHLLAAGYWFGSLLPLLVCLRYLAQPQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRSDAVTTLIRFSRWGHLAVALVVLTGVINSLIILGRWPLDVDSPYQRLLLFKTALVALM CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VMVALANRYAIVPAMSSMPQLAQRGLVLACWIEVGLGAGVLLLVSLFATYAPV HHHHHHCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLATLFVLCRFVHFAAVMLMFGTSLFTALLSPQRLSPYLTRDVRPLLVSCTWLAGLSAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH ALLAIQAGQMGDGWADTWRLDVWWAVLGTTFGEVWRWHLGISLLALLSLWLAEPRRTQLL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALLSTLLLVSMAFIGHAAMHDGGLGVAHRFNHALHLLAAGYWFGSLLPLLVCLRYLAQPQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRSDAVTTLIRFSRWGHLAVALVVLTGVINSLIILGRWPLDVDSPYQRLLLFKTALVALM CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VMVALANRYAIVPAMSSMPQLAQRGLVLACWIEVGLGAGVLLLVSLFATYAPV HHHHHHCCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]