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The map label for this gene is yobA [H]

Identifier: 157370185

GI number: 157370185

Start: 2127794

End: 2128177

Strand: Direct

Name: yobA [H]

Synonym: Spro_1943

Alternate gene names: 157370185

Gene position: 2127794-2128177 (Clockwise)

Preceding gene: 157370184

Following gene: 157370186

Centisome position: 39.05

GC content: 51.82

Gene sequence:

>384_bases
GTGATTGGTAAAATTCGTTCTTCTTATCGCCTGCTTTCCACTATTTTCGTACTCTTTGTCGGGCTGTCCTCACAGCAGGC
GCTGGCGCATGCTCATTTGAAAGTTGAGACGCCGGCGGCAGATGCCAGCGTTAGCCCGGCACCGAAAGTGCTGACGCTTA
ACTTCTCCGAAGGCATCGAGCCTAACTTTAGCGGCATTAAAATCACCGGGCCAGACAACGCCGAAGTGAAAACCGGCAAA
CTGCAGCTCGATGCGAACAACAACACCCAGGTTAACCTGCCTATTGAGGGCGACCTGGCAGCAGGAAAATATAACGTCAG
CTGGCATGTGGTTTCGGTCGACGGTCATAAAACCAAAGGCCAGTACAGCTTCACCGTAAACTAA

Upstream 100 bases:

>100_bases
GTGGCGCAATCATCTGCGGTGGGTTGGGCTGCTGATACATCGCCCTGGCGGTTGGCCTTAATCCTTATCACCCTCGATTA
TTGCTTTAAGGGATATCACT

Downstream 100 bases:

>100_bases
ACCATGAGTCTGGCGACCCTGTTTGTCCTGTGTCGCTTTGTGCACTTTGCGGCGGTGATGCTGATGTTTGGCACCAGCCT
GTTCACCGCCTTATTGTCGC

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIGKIRSSYRLLSTIFVLFVGLSSQQALAHAHLKVETPAADASVSPAPKVLTLNFSEGIEPNFSGIKITGPDNAEVKTGK
LQLDANNNTQVNLPIEGDLAAGKYNVSWHVVSVDGHKTKGQYSFTVN

Sequences:

>Translated_127_residues
MIGKIRSSYRLLSTIFVLFVGLSSQQALAHAHLKVETPAADASVSPAPKVLTLNFSEGIEPNFSGIKITGPDNAEVKTGK
LQLDANNNTQVNLPIEGDLAAGKYNVSWHVVSVDGHKTKGQYSFTVN
>Mature_127_residues
MIGKIRSSYRLLSTIFVLFVGLSSQQALAHAHLKVETPAADASVSPAPKVLTLNFSEGIEPNFSGIKITGPDNAEVKTGK
LQLDANNNTQVNLPIEGDLAAGKYNVSWHVVSVDGHKTKGQYSFTVN

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=116, Percent_Identity=48.2758620689655, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13593; Mature: 13593

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKIRSSYRLLSTIFVLFVGLSSQQALAHAHLKVETPAADASVSPAPKVLTLNFSEGIE
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
PNFSGIKITGPDNAEVKTGKLQLDANNNTQVNLPIEGDLAAGKYNVSWHVVSVDGHKTKG
CCCCCEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCC
QYSFTVN
EEEEEEC
>Mature Secondary Structure
MIGKIRSSYRLLSTIFVLFVGLSSQQALAHAHLKVETPAADASVSPAPKVLTLNFSEGIE
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
PNFSGIKITGPDNAEVKTGKLQLDANNNTQVNLPIEGDLAAGKYNVSWHVVSVDGHKTKG
CCCCCEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCC
QYSFTVN
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]