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The map label for this gene is ycfM [H]

Identifier: 157370164

GI number: 157370164

Start: 2103982

End: 2104569

Strand: Direct

Name: ycfM [H]

Synonym: Spro_1922

Alternate gene names: 157370164

Gene position: 2103982-2104569 (Clockwise)

Preceding gene: 157370163

Following gene: 157370165

Centisome position: 38.61

GC content: 58.33

Gene sequence:

>588_bases
ATGAAAAAGTATCTATTTGTCGCGCTGGCCGCGTTGGTGTTAACCGGCTGTCTGTCGCGCCCACCGGAGCCGGAACAACC
ACAACCGCCGGTAACCGTTGAGCCGGTGACGCCGCCGGTGGTCGAAGAACCGCAGCCGCCGGTGACCGAACCGGTGCCGC
AACCGCCAAAGATTCAGCAGCTCGATTGGCTGAGCAGCGTACAGCCGCTGGTGAATCAGATGCTGAAAGCCGATGGCGTT
AATCCGGGCAGCGTGTTGCTGCTCGACAGCGTGAAGAACAACACCAACGGTTCATTGCAGACTGCGAAAGCGACTTCCGC
CCTGCACAAGGCTTTGGCATCAAATCAAACCTTCTCCATCGTGCCGGAAGCGCAGTTGGCCACCGCCAAACAGACGTTGG
GCCTGTCGGCGGATGACAGCCTGGGTTCACGCAGCAAGGCGATTGGTCTGGCGCGTATCGTTAGCGCGCAGTATGTGCTG
TACAGCGACGTCAGTGGTGATGTGAAGTCACCTACGCTGGATATGCAATTGATGCTGGTGCAAAGCGGTGAAATCGTCTG
GTCAGGCAATGGCGCCGTTACACACTGA

Upstream 100 bases:

>100_bases
TTCAGACGCCACCATTTACTCGCTCAATGGCAACCTCGATGCCAAGCGCGTGCGCCTGTATCTATTCTTGTAAACTCTTG
GTTCATTGAGAGAGGGATTA

Downstream 100 bases:

>100_bases
AGCCGCACTGCGAAGACTGATTGAGCACGAACTGCCGGCGGTGAAAACCGCCGGTTGTCGTTTCAGCCCGGTGCAGGGAC
TGACCGGTGAAAGCTGGCGG

Product: membrane lipoprotein lipid attachment site

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKYLFVALAALVLTGCLSRPPEPEQPQPPVTVEPVTPPVVEEPQPPVTEPVPQPPKIQQLDWLSSVQPLVNQMLKADGV
NPGSVLLLDSVKNNTNGSLQTAKATSALHKALASNQTFSIVPEAQLATAKQTLGLSADDSLGSRSKAIGLARIVSAQYVL
YSDVSGDVKSPTLDMQLMLVQSGEIVWSGNGAVTH

Sequences:

>Translated_195_residues
MKKYLFVALAALVLTGCLSRPPEPEQPQPPVTVEPVTPPVVEEPQPPVTEPVPQPPKIQQLDWLSSVQPLVNQMLKADGV
NPGSVLLLDSVKNNTNGSLQTAKATSALHKALASNQTFSIVPEAQLATAKQTLGLSADDSLGSRSKAIGLARIVSAQYVL
YSDVSGDVKSPTLDMQLMLVQSGEIVWSGNGAVTH
>Mature_195_residues
MKKYLFVALAALVLTGCLSRPPEPEQPQPPVTVEPVTPPVVEEPQPPVTEPVPQPPKIQQLDWLSSVQPLVNQMLKADGV
NPGSVLLLDSVKNNTNGSLQTAKATSALHKALASNQTFSIVPEAQLATAKQTLGLSADDSLGSRSKAIGLARIVSAQYVL
YSDVSGDVKSPTLDMQLMLVQSGEIVWSGNGAVTH

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787348, Length=209, Percent_Identity=50.2392344497608, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014094 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20610; Mature: 20610

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLFVALAALVLTGCLSRPPEPEQPQPPVTVEPVTPPVVEEPQPPVTEPVPQPPKIQQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
LDWLSSVQPLVNQMLKADGVNPGSVLLLDSVKNNTNGSLQTAKATSALHKALASNQTFSI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCEEEE
VPEAQLATAKQTLGLSADDSLGSRSKAIGLARIVSAQYVLYSDVSGDVKSPTLDMQLMLV
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEE
QSGEIVWSGNGAVTH
ECCCEEECCCCCCCC
>Mature Secondary Structure
MKKYLFVALAALVLTGCLSRPPEPEQPQPPVTVEPVTPPVVEEPQPPVTEPVPQPPKIQQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
LDWLSSVQPLVNQMLKADGVNPGSVLLLDSVKNNTNGSLQTAKATSALHKALASNQTFSI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCEEEE
VPEAQLATAKQTLGLSADDSLGSRSKAIGLARIVSAQYVLYSDVSGDVKSPTLDMQLMLV
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEE
QSGEIVWSGNGAVTH
ECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]