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The map label for this gene is ycfL [H]

Identifier: 157370163

GI number: 157370163

Start: 2103565

End: 2103954

Strand: Direct

Name: ycfL [H]

Synonym: Spro_1921

Alternate gene names: 157370163

Gene position: 2103565-2103954 (Clockwise)

Preceding gene: 157370162

Following gene: 157370164

Centisome position: 38.61

GC content: 56.15

Gene sequence:

>390_bases
ATGCGCTATAGCAAACCCCTGCGTTGTCTGATGGCGCTGACGTTACCCGCCATCATACTGATGGGCTGTAGCAGCCCGCG
TGGCATTGCGGTTAATGACCGCCAGACGGTAGTGATGGATTCGCCGGTGCTGACCGCGGGCATTCTGGCAGACAATCCGT
CGATTTCGAATGCTTCCGGGCGGGTGATGGCGACTTCGGAACTCAGCAACAGTCAACCAACGCCGGTCACGGTGCACTAT
CGCTTCTACTGGTATGACGATCAGGGGCTGGATATCCGGCCTTTTGAAGCGCCGCGCACCATTACTATTGCGCCAAATTC
AGACGCCACCATTTACTCGCTCAATGGCAACCTCGATGCCAAGCGCGTGCGCCTGTATCTATTCTTGTAA

Upstream 100 bases:

>100_bases
TTGCAATCGCCATGGCGGCCAGGAGGTCTATCATATTCATATGCATTTGGTCGGTGGCCGCTCCCTGGGGCCGCTGCTGT
CACGCTAATCGAGGAAAATA

Downstream 100 bases:

>100_bases
ACTCTTGGTTCATTGAGAGAGGGATTAATGAAAAAGTATCTATTTGTCGCGCTGGCCGCGTTGGTGTTAACCGGCTGTCT
GTCGCGCCCACCGGAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRYSKPLRCLMALTLPAIILMGCSSPRGIAVNDRQTVVMDSPVLTAGILADNPSISNASGRVMATSELSNSQPTPVTVHY
RFYWYDDQGLDIRPFEAPRTITIAPNSDATIYSLNGNLDAKRVRLYLFL

Sequences:

>Translated_129_residues
MRYSKPLRCLMALTLPAIILMGCSSPRGIAVNDRQTVVMDSPVLTAGILADNPSISNASGRVMATSELSNSQPTPVTVHY
RFYWYDDQGLDIRPFEAPRTITIAPNSDATIYSLNGNLDAKRVRLYLFL
>Mature_129_residues
MRYSKPLRCLMALTLPAIILMGCSSPRGIAVNDRQTVVMDSPVLTAGILADNPSISNASGRVMATSELSNSQPTPVTVHY
RFYWYDDQGLDIRPFEAPRTITIAPNSDATIYSLNGNLDAKRVRLYLFL

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787347, Length=108, Percent_Identity=49.0740740740741, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 14251; Mature: 14251

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSKPLRCLMALTLPAIILMGCSSPRGIAVNDRQTVVMDSPVLTAGILADNPSISNASG
CCCCHHHHHHHHHHHHHEEEECCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCCCCCC
RVMATSELSNSQPTPVTVHYRFYWYDDQGLDIRPFEAPRTITIAPNSDATIYSLNGNLDA
CEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCC
KRVRLYLFL
EEEEEEEEC
>Mature Secondary Structure
MRYSKPLRCLMALTLPAIILMGCSSPRGIAVNDRQTVVMDSPVLTAGILADNPSISNASG
CCCCHHHHHHHHHHHHHEEEECCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCCCCCC
RVMATSELSNSQPTPVTVHYRFYWYDDQGLDIRPFEAPRTITIAPNSDATIYSLNGNLDA
CEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCC
KRVRLYLFL
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]